RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 HOXB7P09629 217 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 RTN1Q16799 776 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 ANO6Q4KMQ2 910 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
SCARB2-208ENST00000638372 RUFY3Q7L099 469 aa16.56■□□□□ 0.24
SCARB2-208ENST00000638372 DHX32Q7L7V1 743 aaKnown RBP16.56■□□□□ 0.24
SCARB2-208ENST00000638372 KRT23Q9C075 422 aa16.56■□□□□ 0.24
SCARB2-208ENST00000638372 UGGT1Q9NYU2 1555 aa16.56■□□□□ 0.24
SCARB2-208ENST00000638372 PCDH11XQ9BZA7 1347 aa16.56■□□□□ 0.24
SCARB2-208ENST00000638372 PCDH11YQ9BZA8 1340 aa16.56■□□□□ 0.24
SCARB2-208ENST00000638372 F8W031 263 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-208ENST00000638372 ZNF622Q969S3 477 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCARB2-208ENST00000638372 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
SCARB2-208ENST00000638372 SPTY2D1Q68D10 685 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-208ENST00000638372 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
SCARB2-208ENST00000638372 INTS4Q96HW7 963 aaKnown RBP16.56■□□□□ 0.24
SCARB2-208ENST00000638372 TMX1Q9H3N1 280 aa16.56■□□□□ 0.24
SCARB2-208ENST00000638372 PDCL2Q8N4E4 241 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 DNAJC25Q9H1X3 360 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 EYA2O00167 538 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 MAGEB6Q8N7X4 407 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 TCP11L1Q9NUJ3 509 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 INSRP06213 1382 aa16.55■□□□□ 0.24
SCARB2-208ENST00000638372 TOM1O60784 492 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 TNNI3KQ59H18 835 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 MRPS27Q92552 414 aaKnown RBP16.54■□□□□ 0.24
SCARB2-208ENST00000638372 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
SCARB2-208ENST00000638372 FPGT-TNNI3KV9GXZ4 949 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 PTPDC1A2A3K4 754 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 ZSCAN12O43309 604 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 TMEM266Q2M3C6 531 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 CNNM2Q9H8M5 875 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 SGSM2O43147 1006 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 AFMP43652 599 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 FAM200AQ8TCP9 573 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 KCNG4Q8TDN1 519 aa16.54■□□□□ 0.24
SCARB2-208ENST00000638372 NSFL1CQ9UNZ2 370 aaKnown RBP16.54■□□□□ 0.24
SCARB2-208ENST00000638372 METP08581 1390 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 SETQ01105 290 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-208ENST00000638372 GCKRQ14397 625 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 UVSSAQ2YD98 709 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 TMTC2Q8N394 836 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-208ENST00000638372 ERVK-7P63135 1459 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 TTC12Q9H892 705 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-208ENST00000638372 ERLIN1O75477 346 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 CACNA2D4Q7Z3S7 1137 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-208ENST00000638372 PLEKHF1Q96S99 279 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 ABCA8O94911 1581 aa16.53■□□□□ 0.24
SCARB2-208ENST00000638372 KIF2AO00139 706 aaPredicted RBP16.52■□□□□ 0.24
SCARB2-208ENST00000638372 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.24
SCARB2-208ENST00000638372 CCDC186Q7Z3E2 898 aa16.52■□□□□ 0.24
SCARB2-208ENST00000638372 TSPY3P0CV98 308 aa16.52■□□□□ 0.24
SCARB2-208ENST00000638372 TSPY8P0CW00 308 aa16.52■□□□□ 0.24
SCARB2-208ENST00000638372 FKBP15Q5T1M5 1219 aa16.52■□□□□ 0.24
SCARB2-208ENST00000638372 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
SCARB2-208ENST00000638372 FAM193AP78312 1265 aa16.52■□□□□ 0.23
SCARB2-208ENST00000638372 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.23
SCARB2-208ENST00000638372 DNAJC10Q8IXB1 793 aa16.52■□□□□ 0.23
SCARB2-208ENST00000638372 CAVIN2O95810 425 aa16.52■□□□□ 0.23
SCARB2-208ENST00000638372 DNA2P51530 1060 aa16.52■□□□□ 0.23
SCARB2-208ENST00000638372 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.23
SCARB2-208ENST00000638372 ABCC4O15439 1325 aa16.52■□□□□ 0.23
SCARB2-208ENST00000638372 SAMD9LQ8IVG5 1584 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 SPTLC2O15270 562 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 ZKSCAN3Q9BRR0 538 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 CENPHQ9H3R5 247 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 RAD50Q92878 1312 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 ITGA6P23229 1130 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
SCARB2-208ENST00000638372 SPA17Q15506 151 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 CCDC12Q8WUD4 166 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-208ENST00000638372 NEO1Q92859 1461 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 MTIF2P46199 727 aaKnown RBP16.51■□□□□ 0.23
SCARB2-208ENST00000638372 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
SCARB2-208ENST00000638372 MYO6Q9UM54 1294 aa16.51■□□□□ 0.23
SCARB2-208ENST00000638372 ADGBQ8N7X0 1667 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 MAGEB6P1A0A0J9YX57 407 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 KIF5CO60282 957 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 GSPT1P15170 499 aaKnown RBP16.5■□□□□ 0.23
SCARB2-208ENST00000638372 GSDMDP57764 484 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-208ENST00000638372 TXLNBQ8N3L3 684 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 CCDC191Q8NCU4 936 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 SLC27A2O14975 620 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
SCARB2-208ENST00000638372 MBD4O95243 580 aa16.49■□□□□ 0.23
SCARB2-208ENST00000638372 LMOD1P29536 600 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms