RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.33■□□□□ 0.84
CACNA1A-227ENST00000636549 USP25Q9UHP3 1055 aa20.33■□□□□ 0.84
CACNA1A-227ENST00000636549 ZNF830Q96NB3 372 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 ORC3Q9UBD5 711 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 GSTO1P78417 241 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 CUX1P39880 1505 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 ZSCAN12O43309 604 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 LDHCP07864 332 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 C4orf50Q6ZRC1 276 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 IMPG2Q9BZV3 1241 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
CACNA1A-227ENST00000636549 HGSO14964 777 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-227ENST00000636549 FAM47CQ5HY64 1035 aa20.31■□□□□ 0.84
CACNA1A-227ENST00000636549 DNAJC21Q5F1R6 531 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-227ENST00000636549 TTC30AQ86WT1 665 aa20.31■□□□□ 0.84
CACNA1A-227ENST00000636549 MAP9Q49MG5 647 aa20.31■□□□□ 0.84
CACNA1A-227ENST00000636549 SPDYE3A6NKU9 549 aa20.31■□□□□ 0.84
CACNA1A-227ENST00000636549 FAM169AQ9Y6X4 670 aa20.31■□□□□ 0.84
CACNA1A-227ENST00000636549 FCHSD2O94868 740 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 NAA16Q6N069 864 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 TRIM6Q9C030 488 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 BRD4O60885 1362 aaPredicted RBP20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 SSFA2P28290 1259 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 ASIC1P78348 528 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 MAGEB6Q8N7X4 407 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 SREK1Q8WXA9 508 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 PTPDC1A2A3K4 754 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 TCP10Q12799 353 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 FCHSD1Q86WN1 690 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 KSR1Q8IVT5 923 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 KLF18A0A0U1RQI7 1052 aa20.3■□□□□ 0.84
CACNA1A-227ENST00000636549 ZNF804AQ7Z570 1209 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 DHX58Q96C10 678 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 CCDC169A6NNP5 214 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 CCT6BQ92526 530 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 DAPK3O43293 454 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 RAPGEF1Q13905 1077 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 NAA25Q14CX7 972 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 SPAG5Q96R06 1193 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 PICK1Q9NRD5 415 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 CFTRP13569 1480 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 MAGEB6P1A0A0J9YX57 407 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 RNASE9P60153 205 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 FAM200AQ8TCP9 573 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 N4BP3O15049 544 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 KIFC2Q96AC6 838 aa20.29■□□□□ 0.84
CACNA1A-227ENST00000636549 ZBTB16Q05516 673 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 AGTPBP1Q9UPW5 1226 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 ZC3H12CQ9C0D7 883 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 HYPKQ9NX55 129 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 LPXNO60711 386 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 GNL1P36915 607 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 STX17P56962 302 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 TXNDC16Q9P2K2 825 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 ERMNQ8TAM6 284 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 EPSTI1Q96J88 318 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 PPME1Q9Y570 386 aa20.28■□□□□ 0.84
CACNA1A-227ENST00000636549 STK25O00506 426 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 PSMD6Q15008 389 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 CEP135Q66GS9 1140 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 KCNK9Q9NPC2 374 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 USH1GQ495M9 461 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 NCOA7Q8NI08 942 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 HSF2BPO75031 334 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 CUL4BQ13620 913 aa20.27■□□□□ 0.84
CACNA1A-227ENST00000636549 PI4KAP2A4QPH2 592 aa20.27■□□□□ 0.83
CACNA1A-227ENST00000636549 TSTA3Q13630 321 aaPredicted RBP20.27■□□□□ 0.83
CACNA1A-227ENST00000636549 C6orf163Q5TEZ5 329 aa20.27■□□□□ 0.83
CACNA1A-227ENST00000636549 PI4KAP1Q8N8J0 262 aa20.27■□□□□ 0.83
CACNA1A-227ENST00000636549 NLRP3Q96P20 1036 aa20.27■□□□□ 0.83
CACNA1A-227ENST00000636549 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.83
CACNA1A-227ENST00000636549 HSPA2P54652 639 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 C9orf84Q5VXU9 1444 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 SPATA17Q96L03 361 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 GNPATO15228 680 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 BIRC3Q13489 604 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 AKR1B10O60218 316 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 CEP112Q8N8E3 955 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 NAP1L3Q99457 506 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 CCDC183Q5T5S1 534 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 C6orf50Q9HD87 102 aa20.26■□□□□ 0.83
CACNA1A-227ENST00000636549 SMARCC1Q92922 1105 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 NAA15Q9BXJ9 866 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 TMOD4Q9NZQ9 345 aa20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 SPDYE16A6NNV3 312 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 SPDYE2Q495Y8 402 aa20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 KIF4AO95239 1232 aa20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 CFAP157Q5JU67 520 aa20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 ALG1Q9BT22 464 aa20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 LRRC59Q96AG4 307 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 RTCBQ9Y3I0 505 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 FAM114A1Q8IWE2 563 aa20.25■□□□□ 0.83
CACNA1A-227ENST00000636549 FOXD4Q12950 439 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 MKRN3Q13064 507 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 DDB1Q16531 1140 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 CFAP57Q96MR6 1250 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms