RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-218ENST00000635120 TOPBP1Q92547 1522 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 MARCKSP29966 332 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-218ENST00000635120 GJC1P36383 396 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 USP48Q86UV5 1035 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 RTN1Q16799 776 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 LRRC27Q9C0I9 530 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 ZBTB3Q9H5J0 574 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 TERF1P54274 439 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 HEATR3Q7Z4Q2 680 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 ATP5J2-PTCD1G3V325 749 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 GSTA5Q7RTV2 222 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 RALGAPBQ86X10 1494 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 RTL1A6NKG5 1358 aa10.37□□□□□ -0.75
CSMD1-218ENST00000635120 EEF2P13639 858 aaKnown RBP10.36□□□□□ -0.75
CSMD1-218ENST00000635120 EMILIN1Q9Y6C2 1016 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 OPA1O60313 960 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 RAPGEF3O95398 923 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 KLF18A0A0U1RQI7 1052 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 HLA-DOAP06340 250 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 CEP57Q86XR8 500 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 NUCB1Q02818 461 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
CSMD1-218ENST00000635120 DNAJC21Q5F1R6 531 aaKnown RBP10.36□□□□□ -0.75
CSMD1-218ENST00000635120 RAB3IL1Q8TBN0 382 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 SELENOSQ9BQE4 189 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 TTC21BQ7Z4L5 1316 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 WDHD1O75717 1129 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-218ENST00000635120 DAAM2Q86T65 1068 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
CSMD1-218ENST00000635120 CDC5LQ99459 802 aaKnown RBP10.36□□□□□ -0.75
CSMD1-218ENST00000635120 SMIM23A6NLE4 172 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 ZBTB43O43298 467 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 TACC1O75410 805 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC129Q6ZRS4 1044 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 TMX3Q96JJ7 454 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 STX8Q9UNK0 236 aa10.36□□□□□ -0.75
CSMD1-218ENST00000635120 CAPN2P17655 700 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 CRNKL1Q9BZJ0 848 aaKnown RBP10.35□□□□□ -0.75
CSMD1-218ENST00000635120 TYRO3Q06418 890 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 NAP1L3Q99457 506 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-218ENST00000635120 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-218ENST00000635120 PSMC4P43686 418 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 IFIT1BQ5T764 474 aaKnown RBP10.35□□□□□ -0.75
CSMD1-218ENST00000635120 ALG1Q9BT22 464 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 MBIPQ9NS73 344 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 NCOA1Q15788 1441 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 DDX46Q7L014 1031 aaKnown RBP10.35□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC50Q8IVM0 306 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 PRPHP41219 470 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 ZNF354CQ86Y25 554 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 KRT23Q9C075 422 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 SDSP20132 328 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC63Q8NA47 563 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 TCEANC2Q96MN5 208 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 DNAJC25Q9H1X3 360 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 JARID2Q92833 1246 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-218ENST00000635120 SMC6Q96SB8 1091 aa10.35□□□□□ -0.75
CSMD1-218ENST00000635120 ZEB2O60315 1214 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 PHACTR2O75167 634 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 TSPY3P0CV98 308 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 TSPY8P0CW00 308 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
CSMD1-218ENST00000635120 TTC14Q96N46 770 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 VPS18Q9P253 973 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 IFT140Q96RY7 1462 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 ABCC5O15440 1437 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 BMP15O95972 392 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC77Q9BR77 488 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 ANAPC4Q9UJX5 808 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 UBXN1Q04323 297 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 Q6ZUG5 572 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 CCDC25Q86WR0 208 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 MYH10P35580 1976 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 PSMA7O14818 248 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 NSD2O96028 1365 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 CFAP58Q5T655 872 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 BRF1Q92994 677 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 UNC13AQ9UPW8 1703 aa10.34□□□□□ -0.75
CSMD1-218ENST00000635120 SCAF11Q99590 1463 aaKnown RBP10.34□□□□□ -0.75
CSMD1-218ENST00000635120 PI4KAP2A4QPH2 592 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 DNM1Q05193 864 aaKnown RBP10.33□□□□□ -0.76
CSMD1-218ENST00000635120 TTC31Q49AM3 519 aaPredicted RBP10.33□□□□□ -0.76
CSMD1-218ENST00000635120 CCDC186Q7Z3E2 898 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 PI4KAP1Q8N8J0 262 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 FAM83GA6ND36 823 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 IGSF3O75054 1194 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 UTP14AQ9BVJ6 771 aaKnown RBP10.33□□□□□ -0.76
CSMD1-218ENST00000635120 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.76
CSMD1-218ENST00000635120 RHOXF2BP0C7M4 288 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 IFT81Q8WYA0 676 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 RHOXF2Q9BQY4 288 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 GUCA1BQ9UMX6 200 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 USP37Q86T82 979 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 MPHOSPH6Q99547 160 aaKnown RBP10.33□□□□□ -0.76
CSMD1-218ENST00000635120 ATP2A1O14983 1001 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 SPAG1Q07617 926 aa10.33□□□□□ -0.76
CSMD1-218ENST00000635120 KDM5AP29375 1690 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms