RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 SWI5Q1ZZU3 235 aa6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 CRTC2Q53ET0 693 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 IFT43Q96FT9 208 aa6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 DBNDD2Q9BQY9 259 aa6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ZMYND15Q9H091 742 aa6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 C11orf16Q9NQ32 467 aa6.09□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 HMX2A2RU54 273 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 TGFBR3LH3BV60 316 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 C21orf2O43822 256 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 EPB42P16452 691 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 DPYDQ12882 1025 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 RTN1Q16799 776 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 CFAP70Q5T0N1 1121 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 GDF6Q6KF10 455 aaPredicted RBP6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 MAP4K3Q8IVH8 894 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 IL22RA1Q8N6P7 574 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 DCAF11Q8TEB1 546 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 SASH3O75995 380 aa6.07□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 RARAP10276 462 aa6.07□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 PLD4Q96BZ4 506 aa6.07□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 CEP41Q9BYV8 373 aa6.07□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 BCS1LQ9Y276 419 aa6.07□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 NRLP54845 237 aa6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 SHKBP1Q8TBC3 707 aa6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 FAM200AQ8TCP9 573 aa6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 SCG3Q8WXD2 468 aaKnown RBP6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 UTP4Q969X6 686 aaKnown RBP6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ASIC4Q96FT7 647 aa6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 MYO19Q96H55 970 aa6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ARXQ96QS3 562 aa6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ZNF777Q9ULD5 760 aaPredicted RBP6.06□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ACIN1Q9UKV3 1341 aaKnown RBP6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ARID4AP29374 1257 aaPredicted RBP6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 WEE1P30291 646 aa6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 INPP5BP32019 993 aa6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 UVSSAQ2YD98 709 aa6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ERICH6Q7L0X2 663 aa6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 HINFPQ9BQA5 517 aa6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 SERPINA10Q9UK55 444 aa6.05□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 J3QW42 95 aa6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ATG7O95352 703 aa6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 WISP1O95388 367 aa6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 HOXA10P31260 410 aaPredicted RBP6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 IDH3AP50213 366 aa6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 CBLL1Q75N03 491 aa6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 COL26A1Q96A83 441 aa6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 CCDC97Q96F63 343 aaPredicted RBP6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 FAM46AQ96IP4 442 aaKnown RBP6.04□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 LOC102724428A0A0B4J2F2 783 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 RFX1P22670 979 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 SIK1P57059 783 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 FBLN7Q53RD9 439 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 CLEC10AQ8IUN9 316 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 GALNT11Q8NCW6 608 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 CHMP7Q8WUX9 453 aaPredicted RBP6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 VTI1AQ96AJ9 217 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 TLR7Q9NYK1 1049 aaKnown RBP6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 NOVA2Q9UNW9 492 aaKnown RBP6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 GTF3C3Q9Y5Q9 886 aa6.03□□□□□ -1.44
NPHP3-ACAD11-202ENST00000632629 ACAD11Q709F0 780 aa6.02□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 FAM83CQ9BQN1 747 aa6.02□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 ANGEL1Q9UNK9 670 aaKnown RBP6.02□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 WDR64B1ANS9 1081 aa6.01□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 GHRHP01286 108 aa6.01□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 FAM20CQ8IXL6 584 aa6.01□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 PBXIP1Q96AQ6 731 aa6.01□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 MUC3BQ9H195 1237 aa6.01□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 TRIM33Q9UPN9 1127 aa6.01□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 PPME1Q9Y570 386 aa6.01□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 CD68P34810 354 aaPredicted RBP6□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 ARSDP51689 593 aa6□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 SRPK2P78362 688 aaKnown RBP6□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 BEND4Q6ZU67 534 aa6□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 KCNK4Q9NYG8 393 aa6□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 PIM2Q9P1W9 311 aa6□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 LINC01387J3KSC0 135 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 PPP1R15AO75807 674 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 JUNBP17275 347 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 ITGB5P18084 799 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 C11orf91Q3C1V1 193 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 SPOCD1Q6ZMY3 1216 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 KIAA1211Q6ZU35 1233 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 CCER1Q8TC90 406 aaPredicted RBP5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 NSUN5Q96P11 429 aaKnown RBP5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 RBSNQ9H1K0 784 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 KCNF1Q9H3M0 494 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 KLK14Q9P0G3 267 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 CCDC39Q9UFE4 941 aa5.99□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 PSAPP07602 524 aa5.98□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 BMP3P12645 472 aa5.98□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 CACTIN-AS1Q8N1I8 211 aa5.98□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 CLP1Q92989 425 aaKnown RBP5.98□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
NPHP3-ACAD11-202ENST00000632629 ZMIZ1Q9ULJ6 1067 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms