RNA–Protein interactions for RNA: ENST00000629219.1

PKP4-218, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-218ENST00000629219 WASHC4Q2M389 1173 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 ALDH1L2Q3SY69 923 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
PKP4-218ENST00000629219 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 SLC51AQ86UW1 340 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 TBC1D16Q8TBP0 767 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 DPF2Q92785 391 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 PRDM10Q9NQV6 1147 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 SEC31BQ9NQW1 1179 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 POLLQ9UGP5 575 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 NSFL1CQ9UNZ2 370 aaKnown RBP11.54□□□□□ -0.56
PKP4-218ENST00000629219 A0A1B0GUL6 1792 aa11.54□□□□□ -0.56
PKP4-218ENST00000629219 TRPM7Q96QT4 1865 aa11.53□□□□□ -0.56
PKP4-218ENST00000629219 RPS12P25398 132 aaKnown RBP11.53□□□□□ -0.56
PKP4-218ENST00000629219 LBX1P52954 281 aa11.53□□□□□ -0.56
PKP4-218ENST00000629219 BRPF1P55201 1214 aaPredicted RBP11.53□□□□□ -0.56
PKP4-218ENST00000629219 ADARB2Q9NS39 739 aaKnown RBP11.53□□□□□ -0.56
PKP4-218ENST00000629219 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
PKP4-218ENST00000629219 GPRC5DQ9NZD1 345 aa11.53□□□□□ -0.56
PKP4-218ENST00000629219 GGA1Q9UJY5 639 aa11.53□□□□□ -0.56
PKP4-218ENST00000629219 SCN9AQ15858 1988 aa11.53□□□□□ -0.56
PKP4-218ENST00000629219 MED23Q9ULK4 1368 aa11.53□□□□□ -0.56
PKP4-218ENST00000629219 ATP2B4P23634 1241 aa11.52□□□□□ -0.57
PKP4-218ENST00000629219 ZC3H15Q8WU90 426 aaKnown RBP11.52□□□□□ -0.57
PKP4-218ENST00000629219 ZC3H12CQ9C0D7 883 aaKnown RBP11.52□□□□□ -0.57
PKP4-218ENST00000629219 GREM2Q9H772 168 aa11.52□□□□□ -0.57
PKP4-218ENST00000629219 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
PKP4-218ENST00000629219 UTYO14607 1347 aa11.52□□□□□ -0.57
PKP4-218ENST00000629219 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 YDJCA8MPS7 323 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 C6orf229H3BNL8 230 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 GRM8O00222 908 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 IGHMBP2P38935 993 aaKnown RBP11.51□□□□□ -0.57
PKP4-218ENST00000629219 CTCFP49711 727 aaPredicted RBP11.51□□□□□ -0.57
PKP4-218ENST00000629219 MMP14P50281 582 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 EAPPQ56P03 285 aaPredicted RBP11.51□□□□□ -0.57
PKP4-218ENST00000629219 ANKIB1Q9P2G1 1089 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 PGAP2Q9UHJ9 254 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
PKP4-218ENST00000629219 ZNF646O15015 1829 aaPredicted RBP11.51□□□□□ -0.57
PKP4-218ENST00000629219 ECE2O60344 883 aa11.5□□□□□ -0.57
PKP4-218ENST00000629219 UFL1O94874 794 aa11.5□□□□□ -0.57
PKP4-218ENST00000629219 ITGA6P23229 1130 aa11.5□□□□□ -0.57
PKP4-218ENST00000629219 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.57
PKP4-218ENST00000629219 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
PKP4-218ENST00000629219 MRPL50Q8N5N7 158 aaKnown RBP11.5□□□□□ -0.57
PKP4-218ENST00000629219 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
PKP4-218ENST00000629219 ANKRD2Q9GZV1 360 aa11.5□□□□□ -0.57
PKP4-218ENST00000629219 MINPP1Q9UNW1 487 aa11.5□□□□□ -0.57
PKP4-218ENST00000629219 F6X3S4 739 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 SLC34A2O95436 690 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 VIL1P09327 827 aaKnown RBP11.49□□□□□ -0.57
PKP4-218ENST00000629219 HSPA8P11142 646 aaKnown RBP11.49□□□□□ -0.57
PKP4-218ENST00000629219 EPS15P42566 896 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 GMPSP49915 693 aaPredicted RBP11.49□□□□□ -0.57
PKP4-218ENST00000629219 FOXO4P98177 505 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 MAP1SQ66K74 1059 aaPredicted RBP11.49□□□□□ -0.57
PKP4-218ENST00000629219 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 JARID2Q92833 1246 aaPredicted RBP11.49□□□□□ -0.57
PKP4-218ENST00000629219 AIDAQ96BJ3 306 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
PKP4-218ENST00000629219 ANKRD18BA2A2Z9 1011 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 PSMD14O00487 310 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 RAD17O75943 681 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 CCT4P50991 539 aaKnown RBP11.48□□□□□ -0.57
PKP4-218ENST00000629219 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
PKP4-218ENST00000629219 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 SSH1Q8WYL5 1049 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 ABHD8Q96I13 439 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 MPHOSPH8Q99549 860 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 DBNDD1Q9H9R9 158 aa11.48□□□□□ -0.57
PKP4-218ENST00000629219 THSD7BQ9C0I4 1608 aa11.47□□□□□ -0.57
PKP4-218ENST00000629219 RASSF10A6NK89 507 aa11.47□□□□□ -0.57
PKP4-218ENST00000629219 H7C1D1 291 aa11.47□□□□□ -0.57
PKP4-218ENST00000629219 IFIT5Q13325 482 aaKnown RBP11.47□□□□□ -0.57
PKP4-218ENST00000629219 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
PKP4-218ENST00000629219 RABL6Q3YEC7 729 aaPredicted RBP11.47□□□□□ -0.57
PKP4-218ENST00000629219 CCDC85AQ96PX6 553 aaPredicted RBP11.47□□□□□ -0.57
PKP4-218ENST00000629219 C9orf78Q9NZ63 289 aaPredicted RBP11.47□□□□□ -0.57
PKP4-218ENST00000629219 CNOT7Q9UIV1 285 aaKnown RBP11.47□□□□□ -0.57
PKP4-218ENST00000629219 ZNF804BA4D1E1 1349 aa11.46□□□□□ -0.57
PKP4-218ENST00000629219 MYO3BQ8WXR4 1341 aa11.46□□□□□ -0.57
PKP4-218ENST00000629219 WDR33Q9C0J8 1336 aaKnown RBP11.46□□□□□ -0.57
PKP4-218ENST00000629219 RIMBP2O15034 1052 aa11.46□□□□□ -0.57
PKP4-218ENST00000629219 COA1Q9GZY4 146 aa11.46□□□□□ -0.57
PKP4-218ENST00000629219 TNRC18O15417 2968 aaPredicted RBP11.46□□□□□ -0.58
PKP4-218ENST00000629219 IRS2Q9Y4H2 1338 aa11.45□□□□□ -0.58
PKP4-218ENST00000629219 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
PKP4-218ENST00000629219 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
PKP4-218ENST00000629219 G3V3G9 751 aa11.45□□□□□ -0.58
PKP4-218ENST00000629219 ZNF280AP59817 542 aaPredicted RBP11.45□□□□□ -0.58
PKP4-218ENST00000629219 CCDC57Q2TAC2 916 aa11.45□□□□□ -0.58
PKP4-218ENST00000629219 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
PKP4-218ENST00000629219 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
PKP4-218ENST00000629219 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
PKP4-218ENST00000629219 RSBN1LQ6PCB5 846 aaPredicted RBP11.45□□□□□ -0.58
PKP4-218ENST00000629219 LMBR1LQ6UX01 489 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms