RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 ABCC11Q96J66 1382 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 GIGYF1O75420 1035 aaPredicted RBP10.12□□□□□ -0.79
GABRB3-216ENST00000628124 ADCY5O95622 1261 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 SLC8A3P57103 927 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 DUSP27Q5VZP5 1158 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 VAT1LQ9HCJ6 419 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 PRDM10Q9NQV6 1147 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 CNNM2Q9H8M5 875 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 CPSF2Q9P2I0 782 aaKnown RBP10.12□□□□□ -0.79
GABRB3-216ENST00000628124 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
GABRB3-216ENST00000628124 NEDD9Q14511 834 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 GEN1Q17RS7 908 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 CEP57Q86XR8 500 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 LMNTD2Q8IXW0 634 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 EPSTI1Q96J88 318 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 CCDC114Q96M63 670 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 MAK16Q9BXY0 300 aaKnown RBP10.11□□□□□ -0.79
GABRB3-216ENST00000628124 FYB2Q5VWT5 728 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 CROCCP2Q86T23 111 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 TBC1D31Q96DN5 1066 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.11□□□□□ -0.79
GABRB3-216ENST00000628124 NOC2LQ9Y3T9 749 aaKnown RBP10.11□□□□□ -0.79
GABRB3-216ENST00000628124 GBP7Q8N8V2 638 aaPredicted RBP10.11□□□□□ -0.79
GABRB3-216ENST00000628124 A0A1B0GUA9 196 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
GABRB3-216ENST00000628124 TRMT1LQ7Z2T5 733 aaKnown RBP10.11□□□□□ -0.79
GABRB3-216ENST00000628124 CECR2Q9BXF3 1484 aa10.11□□□□□ -0.79
GABRB3-216ENST00000628124 A6NNZ2 444 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 RIOK3O14730 519 aaKnown RBP10.1□□□□□ -0.79
GABRB3-216ENST00000628124 CUL4BQ13620 913 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 TUBB8Q3ZCM7 444 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 SLC26A6Q9BXS9 759 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 CCT2P78371 535 aaKnown RBP10.1□□□□□ -0.79
GABRB3-216ENST00000628124 TRPC3Q13507 836 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 PPP1R7Q15435 360 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 SRGAP1Q7Z6B7 1085 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 NBPF11Q86T75 865 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 ARHGAP24Q8N264 748 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 MICALL1Q8N3F8 863 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 NAP1L4Q99733 375 aaKnown RBP10.1□□□□□ -0.79
GABRB3-216ENST00000628124 ZSWIM4Q9H7M6 989 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 ECHDC1Q9NTX5 307 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 GJB2P29033 226 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 ATP11AP98196 1134 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 CCDC42Q96M95 316 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 CCDC94Q9BW85 323 aaPredicted RBP10.1□□□□□ -0.79
GABRB3-216ENST00000628124 CADPSQ9ULU8 1353 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 SARNPP82979 210 aaKnown RBP10.1□□□□□ -0.79
GABRB3-216ENST00000628124 WTAPQ15007 396 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 SEL1L2Q5TEA6 688 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 RSPH3Q86UC2 560 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 NEK1Q96PY6 1258 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 ZMYND15Q9H091 742 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 FAM204AQ9H8W3 233 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 POGZQ7Z3K3 1410 aa10.1□□□□□ -0.79
GABRB3-216ENST00000628124 GJC1P36383 396 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 RILPL1Q5EBL4 403 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 SMARCC2Q8TAQ2 1214 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 DBF4Q9UBU7 674 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-216ENST00000628124 BCAP29Q9UHQ4 241 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 STK10O94804 968 aaKnown RBP10.09□□□□□ -0.79
GABRB3-216ENST00000628124 BIRC2Q13490 618 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 MICU3Q86XE3 530 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 TMEM57Q8N5G2 664 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 NEK11Q8NG66 645 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 ESR2Q92731 530 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 KCNK9Q9NPC2 374 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 PTCD1O75127 700 aaKnown RBP10.09□□□□□ -0.79
GABRB3-216ENST00000628124 PPFIA2O75334 1257 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 CAPN2P17655 700 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 PPP1R2P41236 205 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 ANKRD24Q8TF21 1146 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 TSGA10Q9BZW7 698 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 VCX3AQ9NNX9 186 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 TSPY3P0CV98 308 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 TSPY8P0CW00 308 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 CALML3P27482 149 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 ERCC5P28715 1186 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-216ENST00000628124 ASIC1P78348 528 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 MCM6Q14566 821 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 CCDC26Q8TAB7 109 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 SH3BGRP55822 239 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-216ENST00000628124 ST5P78524 1137 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 SDCCAG8Q86SQ7 713 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-216ENST00000628124 SEPT10Q9P0V9 454 aa10.09□□□□□ -0.79
GABRB3-216ENST00000628124 CALM1P0DP23 149 aa10.08□□□□□ -0.8
GABRB3-216ENST00000628124 CALM2P0DP24 149 aa10.08□□□□□ -0.8
GABRB3-216ENST00000628124 CALM3P0DP25 149 aa10.08□□□□□ -0.8
GABRB3-216ENST00000628124 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
GABRB3-216ENST00000628124 TTC31Q49AM3 519 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-216ENST00000628124 TAOK1Q7L7X3 1001 aa10.08□□□□□ -0.8
GABRB3-216ENST00000628124 RAB11FIP4Q86YS3 637 aa10.08□□□□□ -0.8
GABRB3-216ENST00000628124 SLC12A5Q9H2X9 1139 aa10.08□□□□□ -0.8
GABRB3-216ENST00000628124 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
GABRB3-216ENST00000628124 HSPA1LP34931 641 aa10.08□□□□□ -0.8
GABRB3-216ENST00000628124 GBP6Q6ZN66 633 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms