RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 MPHOSPH10O00566 681 aaKnown RBP10.1□□□□□ -0.79
SMN2-214ENST00000626847 B4GALNT3Q6L9W6 998 aa10.1□□□□□ -0.79
SMN2-214ENST00000626847 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
SMN2-214ENST00000626847 MKRN1Q9UHC7 482 aaKnown RBP10.1□□□□□ -0.79
SMN2-214ENST00000626847 XRN1Q8IZH2 1706 aaKnown RBP10.1□□□□□ -0.79
SMN2-214ENST00000626847 KANK1Q14678 1352 aa10.1□□□□□ -0.79
SMN2-214ENST00000626847 IPO7O95373 1038 aaKnown RBP10.09□□□□□ -0.79
SMN2-214ENST00000626847 ELOAQ14241 798 aaKnown RBP10.09□□□□□ -0.79
SMN2-214ENST00000626847 AGERQ15109 404 aa10.09□□□□□ -0.79
SMN2-214ENST00000626847 LARP1Q6PKG0 1096 aaKnown RBP10.09□□□□□ -0.79
SMN2-214ENST00000626847 FEZ1Q99689 392 aa10.09□□□□□ -0.79
SMN2-214ENST00000626847 CARD14Q9BXL6 1004 aa10.09□□□□□ -0.79
SMN2-214ENST00000626847 NOVA2Q9UNW9 492 aaKnown RBP10.09□□□□□ -0.79
SMN2-214ENST00000626847 ERBINQ96RT1 1412 aa10.09□□□□□ -0.79
SMN2-214ENST00000626847 RPRD2Q5VT52 1461 aaKnown RBP10.09□□□□□ -0.79
SMN2-214ENST00000626847 RGPD1P0DJD0 1748 aa10.09□□□□□ -0.79
SMN2-214ENST00000626847 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 COQ9O75208 318 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 XRCC6P12956 609 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMN2-214ENST00000626847 NCOA4Q13772 614 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 VPS72Q15906 364 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 CT47A1Q5JQC4 288 aaPredicted RBP10.08□□□□□ -0.8
SMN2-214ENST00000626847 ZNF771Q7L3S4 317 aaPredicted RBP10.08□□□□□ -0.8
SMN2-214ENST00000626847 PLPP7Q8NBV4 271 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 OCSTAMPQ9BR26 566 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 SPON1Q9HCB6 807 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 TMEM131LA2VDJ0 1609 aa10.08□□□□□ -0.8
SMN2-214ENST00000626847 RASA1P20936 1047 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 MCM5P33992 734 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 CDC37Q16543 378 aaPredicted RBP10.07□□□□□ -0.8
SMN2-214ENST00000626847 SASS6Q6UVJ0 657 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 ZSCAN30Q86W11 494 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 MPNDQ8N594 471 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 CAMKK2Q96RR4 588 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 MTMR7Q9Y216 660 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 PAXBP1Q9Y5B6 917 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 ATP5J2-PTCD1G3V325 749 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
SMN2-214ENST00000626847 GUCY2CP25092 1073 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 EML3Q32P44 896 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 PTCRAQ6ISU1 281 aaPredicted RBP10.07□□□□□ -0.8
SMN2-214ENST00000626847 JMYQ8N9B5 988 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 TMC1Q8TDI8 760 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 SIRT1Q96EB6 747 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 STK17AQ9UEE5 414 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 NALCNQ8IZF0 1738 aa10.07□□□□□ -0.8
SMN2-214ENST00000626847 KIF15Q9NS87 1388 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 UQCRHLA0A096LP55 91 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L15C9J2P7 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L10C9JJH3 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L13C9JLJ4 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L12C9JPN9 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L11C9JVI0 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L21D6R901 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L18D6R9N7 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L22D6RA61 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L17D6RBQ6 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L19D6RCP7 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L20D6RJB6 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 KCNQ2O43526 872 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 GIGYF1O75420 1035 aaPredicted RBP10.06□□□□□ -0.8
SMN2-214ENST00000626847 UQCRHP07919 91 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 MSNP26038 577 aaKnown RBP10.06□□□□□ -0.8
SMN2-214ENST00000626847 POLD1P28340 1107 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 USP17L24Q0WX57 530 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 BECN1Q14457 450 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 MAP7D1Q3KQU3 841 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 TMEM164Q5U3C3 297 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 LRCH2Q5VUJ6 765 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 ICE2Q659A1 982 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 DDX46Q7L014 1031 aaKnown RBP10.06□□□□□ -0.8
SMN2-214ENST00000626847 STK32AQ8WU08 396 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 HIRIP3Q9BW71 556 aaPredicted RBP10.06□□□□□ -0.8
SMN2-214ENST00000626847 ZMIZ1Q9ULJ6 1067 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 IVNS1ABPQ9Y6Y0 642 aa10.06□□□□□ -0.8
SMN2-214ENST00000626847 TNS1Q9HBL0 1735 aaKnown RBP10.05□□□□□ -0.8
SMN2-214ENST00000626847 CCDC196A0A1B0GTZ2 297 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 GOLGA6L6A8MZA4 724 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 GOLGA6L22H0YM25 854 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 IPO8O15397 1037 aaKnown RBP10.05□□□□□ -0.8
SMN2-214ENST00000626847 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 SH3BP5LQ7L8J4 393 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 GOLGA6L1Q8N7Z2 621 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 BACH2Q9BYV9 841 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
SMN2-214ENST00000626847 SMC3Q9UQE7 1217 aa10.05□□□□□ -0.8
SMN2-214ENST00000626847 HSPA5P11021 654 aaKnown RBP10.04□□□□□ -0.8
SMN2-214ENST00000626847 SCP2P22307 547 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 C11orf91Q3C1V1 193 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 FOXD4L6Q3SYB3 417 aaPredicted RBP10.04□□□□□ -0.8
SMN2-214ENST00000626847 LINC01559Q495D7 138 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 FOXD4L3Q6VB84 417 aaPredicted RBP10.04□□□□□ -0.8
SMN2-214ENST00000626847 BPHLQ86WA6 291 aaPredicted RBP10.04□□□□□ -0.8
SMN2-214ENST00000626847 PHTF2Q8N3S3 785 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
SMN2-214ENST00000626847 FAM200AQ8TCP9 573 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms