RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 SAAL1Q96ER3 474 aa5.97□□□□□ -1.45
CHD2-204ENST00000625463 RBM17Q96I25 401 aaKnown RBP5.97□□□□□ -1.45
CHD2-204ENST00000625463 IWS1Q96ST2 819 aa5.97□□□□□ -1.45
CHD2-204ENST00000625463 CDC5LQ99459 802 aaKnown RBP5.97□□□□□ -1.45
CHD2-204ENST00000625463 DUSP9Q99956 384 aaKnown RBP5.97□□□□□ -1.45
CHD2-204ENST00000625463 MMADHCQ9H3L0 296 aaPredicted RBP5.97□□□□□ -1.45
CHD2-204ENST00000625463 ZSCAN16Q9H4T2 348 aaPredicted RBP5.97□□□□□ -1.45
CHD2-204ENST00000625463 CDHR5Q9HBB8 845 aa5.97□□□□□ -1.45
CHD2-204ENST00000625463 LUC7LQ9NQ29 371 aaKnown RBP5.97□□□□□ -1.45
CHD2-204ENST00000625463 BATF3Q9NR55 127 aa5.97□□□□□ -1.45
CHD2-204ENST00000625463 N6AMT1Q9Y5N5 214 aa5.97□□□□□ -1.45
CHD2-204ENST00000625463 ARHGAP31Q2M1Z3 1444 aa5.97□□□□□ -1.45
CHD2-204ENST00000625463 BRD4O60885 1362 aaPredicted RBP5.96□□□□□ -1.45
CHD2-204ENST00000625463 KDM4FA0A1W2PPD8 638 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 TMEM110-MUSTN1A8MSY1 372 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 EIF3CLB5ME19 914 aaKnown RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 MTRF1O75570 445 aaKnown RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 CYP11B2P19099 503 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 ACTN2P35609 894 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 CCNHP51946 323 aaPredicted RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 NSUN2Q08J23 767 aaKnown RBP eCLIP5.96□□□□□ -1.46
CHD2-204ENST00000625463 G3BP1Q13283 466 aaKnown RBP eCLIP5.96□□□□□ -1.46
CHD2-204ENST00000625463 PTK7Q13308 1070 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 SEPT7Q16181 437 aaKnown RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 FXNQ16595 210 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 KLHL40Q2TBA0 621 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 AKNAD1Q5T1N1 836 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 MYSM1Q5VVJ2 828 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 MSL1Q68DK7 614 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 FAAH2Q6GMR7 532 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 CLEC17AQ6ZS10 378 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 ZNF662Q6ZS27 426 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 TMEM110Q86TL2 294 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 SLF2Q8IX21 1173 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 PARP9Q8IXQ6 854 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 PEX5LQ8IYB4 626 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 ARL10Q8N8L6 244 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 PRPF38AQ8NAV1 312 aaKnown RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 ATP11CQ8NB49 1132 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 C3orf20Q8ND61 904 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 ZNF280CQ8ND82 737 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 FAM81AQ8TBF8 368 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 ANKRD24Q8TF21 1146 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 SREK1Q8WXA9 508 aaKnown RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 TSC1Q92574 1164 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 N4BP2L2Q92802 583 aaPredicted RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 KHSRPQ92945 711 aaKnown RBP eCLIP5.96□□□□□ -1.461e-6■■■■□ 22
CHD2-204ENST00000625463 DHTKD1Q96HY7 919 aaPredicted RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 RUFY1Q96T51 708 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 EIF3CQ99613 913 aaKnown RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 SH3GL1Q99961 368 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 LRRCC1Q9C099 1032 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 RPAP3Q9H6T3 665 aaPredicted RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 TUBA8Q9NY65 449 aaPredicted RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 RGL1Q9NZL6 768 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 TBC1D7Q9P0N9 293 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 BIN2Q9UBW5 565 aaPredicted RBP5.96□□□□□ -1.46
CHD2-204ENST00000625463 LCMT1Q9UIC8 334 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 CEP162Q5TB80 1403 aa5.96□□□□□ -1.46
CHD2-204ENST00000625463 ROCK2O75116 1388 aaKnown RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 GNPATO15228 680 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 RTN2O75298 545 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 HOXB3P14651 431 aaPredicted RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 TCF3P15923 654 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 ZBED6P86452 979 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 MECOMQ03112 1051 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 PDE4DQ08499 809 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 PTGDRQ13258 359 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 IRF5Q13568 498 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 LAMB3Q13751 1172 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 CLPPQ16740 277 aaPredicted RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 LRRC23Q53EV4 343 aaPredicted RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 TADA2BQ86TJ2 420 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 CCAR1Q8IX12 1150 aaKnown RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 AFAP1Q8N556 730 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 GBP7Q8N8V2 638 aaPredicted RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 RETREG2Q8NC44 543 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 GABPB2Q8TAK5 448 aaPredicted RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 TBC1D5Q92609 795 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 VTI1AQ96AJ9 217 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 NACC2Q96BF6 587 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 RBM33Q96EV2 1170 aaKnown RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 LRRC27Q9C0I9 530 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 DHX36Q9H2U1 1008 aaKnown RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 NRDE2Q9H7Z3 1164 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 ZNHIT6Q9NWK9 470 aaKnown RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 COMMD8Q9NX08 183 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 MAP3K20Q9NYL2 800 aaKnown RBP5.95□□□□□ -1.46
CHD2-204ENST00000625463 TMEM63CQ9P1W3 806 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 ZNF652Q9Y2D9 606 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 CHMP3Q9Y3E7 222 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 PCDHGA10Q9Y5H3 936 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.95□□□□□ -1.46
CHD2-204ENST00000625463 EVC2Q86UK5 1308 aa5.95□□□□□ -1.46
CHD2-204ENST00000625463 EIF4G1Q04637 1599 aaKnown RBP5.94□□□□□ -1.46
CHD2-204ENST00000625463 GOLGA6L9A6NEM1 432 aa5.94□□□□□ -1.46
CHD2-204ENST00000625463 AHCYL1O43865 530 aa5.94□□□□□ -1.46
CHD2-204ENST00000625463 BBOX1O75936 387 aa5.94□□□□□ -1.46
CHD2-204ENST00000625463 MTA2O94776 668 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms