RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 DCTPP1Q9H773 170 aa15.46■□□□□ 0.07
LINC00963-216ENST00000623185 PA2G4Q9UQ80 394 aaKnown RBP15.46■□□□□ 0.07
LINC00963-216ENST00000623185 LAMB2P55268 1798 aa15.46■□□□□ 0.07
LINC00963-216ENST00000623185 GRIN3BO60391 1043 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 RAB11FIP3O75154 756 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 CHRNDQ07001 517 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 GPR162Q16538 588 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 CCDC93Q567U6 631 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 RTFDC1Q9BY42 306 aaPredicted RBP15.45■□□□□ 0.06
LINC00963-216ENST00000623185 VPS33BQ9H267 617 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 CEP126Q9P2H0 1117 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 NSFL1CQ9UNZ2 370 aaKnown RBP15.45■□□□□ 0.06
LINC00963-216ENST00000623185 LEMD3Q9Y2U8 911 aa15.45■□□□□ 0.06
LINC00963-216ENST00000623185 PDE8BO95263 885 aa15.44■□□□□ 0.06
LINC00963-216ENST00000623185 ATP2B4P23634 1241 aa15.44■□□□□ 0.06
LINC00963-216ENST00000623185 ERC1Q8IUD2 1116 aa15.44■□□□□ 0.06
LINC00963-216ENST00000623185 PSMD1Q99460 953 aa15.44■□□□□ 0.06
LINC00963-216ENST00000623185 SIL1Q9H173 461 aa15.44■□□□□ 0.06
LINC00963-216ENST00000623185 ANKIB1Q9P2G1 1089 aa15.44■□□□□ 0.06
LINC00963-216ENST00000623185 ZNF219Q9P2Y4 722 aaPredicted RBP15.44■□□□□ 0.06
LINC00963-216ENST00000623185 XDHP47989 1333 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 KIAA1551Q9HCM1 1747 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 MYH3P11055 1940 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 YBX3P16989 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC00963-216ENST00000623185 GPSM2P81274 684 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 OLFM4Q6UX06 510 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 DPP8Q6V1X1 898 aaPredicted RBP15.43■□□□□ 0.06
LINC00963-216ENST00000623185 SUPT20HQ8NEM7 779 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
LINC00963-216ENST00000623185 SASH1O94885 1247 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 UBE4AQ14139 1066 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 ARHGAP27Q6ZUM4 889 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 VGLL2Q8N8G2 317 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 AKAP2Q9Y2D5 859 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 LTBP3Q9NS15 1303 aa15.42■□□□□ 0.06
LINC00963-216ENST00000623185 SLX4Q8IY92 1834 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 TAF5LO75529 589 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 IGHDP01880 384 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 FKBP4Q02790 459 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC00963-216ENST00000623185 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
LINC00963-216ENST00000623185 HELBQ8NG08 1087 aaPredicted RBP15.41■□□□□ 0.06
LINC00963-216ENST00000623185 TBC1D16Q8TBP0 767 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 POLLQ9UGP5 575 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 GGA1Q9UJY5 639 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 EXOC6BQ9Y2D4 811 aa15.41■□□□□ 0.06
LINC00963-216ENST00000623185 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
LINC00963-216ENST00000623185 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
LINC00963-216ENST00000623185 TFCP2Q12800 502 aa15.4■□□□□ 0.06
LINC00963-216ENST00000623185 OS9Q13438 667 aaPredicted RBP15.4■□□□□ 0.06
LINC00963-216ENST00000623185 C15orf52Q6ZUT6 534 aaKnown RBP15.4■□□□□ 0.06
LINC00963-216ENST00000623185 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
LINC00963-216ENST00000623185 KIF1BPQ96EK5 621 aa15.4■□□□□ 0.06
LINC00963-216ENST00000623185 EYA3Q99504 573 aa15.4■□□□□ 0.06
LINC00963-216ENST00000623185 ZNF804BA4D1E1 1349 aa15.4■□□□□ 0.06
LINC00963-216ENST00000623185 SRCAPQ6ZRS2 3230 aa15.39■□□□□ 0.06
LINC00963-216ENST00000623185 C6orf229H3BNL8 230 aa15.39■□□□□ 0.05
LINC00963-216ENST00000623185 FGFR2P21802 821 aa15.39■□□□□ 0.05
LINC00963-216ENST00000623185 PUM3Q15397 648 aaKnown RBP15.39■□□□□ 0.05
LINC00963-216ENST00000623185 WASHC4Q2M389 1173 aa15.39■□□□□ 0.05
LINC00963-216ENST00000623185 SMC5Q8IY18 1101 aa15.39■□□□□ 0.05
LINC00963-216ENST00000623185 LPIN2Q92539 896 aa15.39■□□□□ 0.05
LINC00963-216ENST00000623185 ZC3H12CQ9C0D7 883 aaKnown RBP15.39■□□□□ 0.05
LINC00963-216ENST00000623185 TAOK3Q9H2K8 898 aa15.39■□□□□ 0.05
LINC00963-216ENST00000623185 SNED1Q8TER0 1413 aa15.39■□□□□ 0.05
LINC00963-216ENST00000623185 COL4A1P02462 1669 aa15.38■□□□□ 0.05
LINC00963-216ENST00000623185 NFKBIEO00221 500 aa15.38■□□□□ 0.05
LINC00963-216ENST00000623185 KCNJ4P48050 445 aa15.38■□□□□ 0.05
LINC00963-216ENST00000623185 SLC51AQ86UW1 340 aa15.38■□□□□ 0.05
LINC00963-216ENST00000623185 TAF1P21675 1872 aa15.37■□□□□ 0.05
LINC00963-216ENST00000623185 WTIPA6NIX2 430 aaPredicted RBP15.37■□□□□ 0.05
LINC00963-216ENST00000623185 UFL1O94874 794 aa15.37■□□□□ 0.05
LINC00963-216ENST00000623185 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
LINC00963-216ENST00000623185 TIMM10P62072 90 aa15.37■□□□□ 0.05
LINC00963-216ENST00000623185 CLASRPQ8N2M8 674 aaKnown RBP15.37■□□□□ 0.05
LINC00963-216ENST00000623185 LRRCC1Q9C099 1032 aa15.37■□□□□ 0.05
LINC00963-216ENST00000623185 PPP4R2Q9NY27 417 aa15.37■□□□□ 0.05
LINC00963-216ENST00000623185 BRCA1P38398 1863 aaKnown RBP15.37■□□□□ 0.05
LINC00963-216ENST00000623185 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
LINC00963-216ENST00000623185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.36■□□□□ 0.05
LINC00963-216ENST00000623185 SNAP23O00161 211 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 SLC5A1P13866 664 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 LMNB1P20700 586 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 IARSP41252 1262 aaKnown RBP15.35■□□□□ 0.05
LINC00963-216ENST00000623185 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 TNNI3KQ59H18 835 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 FBXO33Q7Z6M2 555 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
LINC00963-216ENST00000623185 FPGT-TNNI3KV9GXZ4 949 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 IRS2Q9Y4H2 1338 aa15.35■□□□□ 0.05
LINC00963-216ENST00000623185 A0A1B0GUL7 405 aa15.34■□□□□ 0.05
LINC00963-216ENST00000623185 ZBTB22O15209 634 aa15.34■□□□□ 0.05
LINC00963-216ENST00000623185 CAVIN4Q5BKX8 364 aa15.34■□□□□ 0.05
LINC00963-216ENST00000623185 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
LINC00963-216ENST00000623185 TXNRD3Q86VQ6 643 aa15.34■□□□□ 0.05
LINC00963-216ENST00000623185 EAF2Q96CJ1 260 aaPredicted RBP15.34■□□□□ 0.05
LINC00963-216ENST00000623185 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms