RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TMX4Q9H1E5 349 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-221ENST00000622702 TAOK3Q9H2K8 898 aa24.63■■□□□ 1.53
PDLIM2-221ENST00000622702 FBXO3Q9UK99 471 aa24.63■■□□□ 1.53
PDLIM2-221ENST00000622702 NOP58Q9Y2X3 529 aaKnown RBP24.63■■□□□ 1.53
PDLIM2-221ENST00000622702 ATP6V0A2Q9Y487 856 aa24.63■■□□□ 1.53
PDLIM2-221ENST00000622702 COL4A1P02462 1669 aa24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 RPS8P62241 208 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 C9orf131Q5VYM1 1079 aa24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 ANKRD18AQ8IVF6 992 aa24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 KLHDC4Q8TBB5 520 aa24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 ZNF594Q96JF6 807 aaPredicted RBP24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 PA2G4Q9UQ80 394 aaKnown RBP24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 CCDC88AQ3V6T2 1871 aa24.62■■□□□ 1.53
PDLIM2-221ENST00000622702 IGHMBP2P38935 993 aaKnown RBP24.61■■□□□ 1.53
PDLIM2-221ENST00000622702 PRELPP51888 382 aa24.61■■□□□ 1.53
PDLIM2-221ENST00000622702 RNF181Q9P0P0 153 aa24.61■■□□□ 1.53
PDLIM2-221ENST00000622702 LTBP3Q9NS15 1303 aa24.6■■□□□ 1.53
PDLIM2-221ENST00000622702 IGHDP01880 384 aa24.6■■□□□ 1.53
PDLIM2-221ENST00000622702 LMNB1P20700 586 aa24.6■■□□□ 1.53
PDLIM2-221ENST00000622702 SP8Q8IXZ3 490 aa24.6■■□□□ 1.53
PDLIM2-221ENST00000622702 DCTPP1Q9H773 170 aa24.6■■□□□ 1.53
PDLIM2-221ENST00000622702 EYA2O00167 538 aa24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 SURF6O75683 361 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 CIAO1O76071 339 aa24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 FKBP4Q02790 459 aaKnown RBP eCLIP24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 LDHAL6AQ6ZMR3 332 aa24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 TMC4Q7Z404 712 aa24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 MPHOSPH8Q99549 860 aa24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 BSDC1Q9NW68 430 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 SNED1Q8TER0 1413 aa24.59■■□□□ 1.53
PDLIM2-221ENST00000622702 GRIPAP1Q4V328 841 aa24.58■■□□□ 1.53
PDLIM2-221ENST00000622702 HSP90AB4PQ58FF6 505 aa24.58■■□□□ 1.52
PDLIM2-221ENST00000622702 CCDC136Q96JN2 1154 aa24.58■■□□□ 1.52
PDLIM2-221ENST00000622702 SIL1Q9H173 461 aa24.58■■□□□ 1.52
PDLIM2-221ENST00000622702 ATG9AQ7Z3C6 839 aa24.57■■□□□ 1.52
PDLIM2-221ENST00000622702 PUS3Q9BZE2 481 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-221ENST00000622702 EXOC6BQ9Y2D4 811 aa24.57■■□□□ 1.52
PDLIM2-221ENST00000622702 RIPOR2Q9Y4F9 1068 aa24.57■■□□□ 1.52
PDLIM2-221ENST00000622702 GTF3C3Q9Y5Q9 886 aa24.57■■□□□ 1.52
PDLIM2-221ENST00000622702 G3BP1Q13283 466 aaKnown RBP eCLIP24.56■■□□□ 1.52
PDLIM2-221ENST00000622702 LRRC24Q50LG9 513 aa24.56■■□□□ 1.52
PDLIM2-221ENST00000622702 SMC5Q8IY18 1101 aa24.56■■□□□ 1.52
PDLIM2-221ENST00000622702 GCC1Q96CN9 775 aa24.56■■□□□ 1.52
PDLIM2-221ENST00000622702 PSMD1Q99460 953 aa24.56■■□□□ 1.52
PDLIM2-221ENST00000622702 ZNF277Q9NRM2 450 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-221ENST00000622702 CNNM1Q9NRU3 951 aa24.56■■□□□ 1.52
PDLIM2-221ENST00000622702 LRRC37AA6NMS7 1700 aa24.55■■□□□ 1.52
PDLIM2-221ENST00000622702 IL15P40933 162 aaPredicted RBP24.55■■□□□ 1.52
PDLIM2-221ENST00000622702 RAB11FIP3O75154 756 aa24.54■■□□□ 1.52
PDLIM2-221ENST00000622702 MPNDQ8N594 471 aa24.54■■□□□ 1.52
PDLIM2-221ENST00000622702 SPEF2Q9C093 1822 aa24.54■■□□□ 1.52
PDLIM2-221ENST00000622702 DICER1Q9UPY3 1922 aaKnown RBP24.53■■□□□ 1.52
PDLIM2-221ENST00000622702 B4GALNT3Q6L9W6 998 aa24.53■■□□□ 1.52
PDLIM2-221ENST00000622702 DPP8Q6V1X1 898 aaPredicted RBP24.53■■□□□ 1.52
PDLIM2-221ENST00000622702 ERC1Q8IUD2 1116 aa24.53■■□□□ 1.52
PDLIM2-221ENST00000622702 MROH5Q6ZUA9 1318 aa24.53■■□□□ 1.52
PDLIM2-221ENST00000622702 KDM2BQ8NHM5 1336 aa24.53■■□□□ 1.52
PDLIM2-221ENST00000622702 OS9Q13438 667 aaPredicted RBP24.52■■□□□ 1.52
PDLIM2-221ENST00000622702 MINPP1Q9UNW1 487 aa24.52■■□□□ 1.52
PDLIM2-221ENST00000622702 TIAM2Q8IVF5 1701 aa24.52■■□□□ 1.51
PDLIM2-221ENST00000622702 IARSP41252 1262 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-221ENST00000622702 NSFL1CQ9UNZ2 370 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-221ENST00000622702 SASH1O94885 1247 aa24.51■■□□□ 1.51
PDLIM2-221ENST00000622702 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-221ENST00000622702 ZNF784Q8NCA9 323 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-221ENST00000622702 KIF1BPQ96EK5 621 aa24.51■■□□□ 1.51
PDLIM2-221ENST00000622702 GPSM2P81274 684 aa24.5■■□□□ 1.51
PDLIM2-221ENST00000622702 CHRNDQ07001 517 aa24.5■■□□□ 1.51
PDLIM2-221ENST00000622702 VGLL2Q8N8G2 317 aa24.5■■□□□ 1.51
PDLIM2-221ENST00000622702 RTFDC1Q9BY42 306 aaPredicted RBP24.5■■□□□ 1.51
PDLIM2-221ENST00000622702 METTL24Q5JXM2 366 aa24.49■■□□□ 1.51
PDLIM2-221ENST00000622702 SUPT20HQ8NEM7 779 aa24.49■■□□□ 1.51
PDLIM2-221ENST00000622702 RHPN1Q8TCX5 695 aa24.49■■□□□ 1.51
PDLIM2-221ENST00000622702 ANKRD2Q9GZV1 360 aa24.49■■□□□ 1.51
PDLIM2-221ENST00000622702 CEP126Q9P2H0 1117 aa24.49■■□□□ 1.51
PDLIM2-221ENST00000622702 ZNF526Q8TF50 670 aaPredicted RBP24.48■■□□□ 1.51
PDLIM2-221ENST00000622702 LRRCC1Q9C099 1032 aa24.48■■□□□ 1.51
PDLIM2-221ENST00000622702 ZC3H4Q9UPT8 1303 aaKnown RBP24.48■■□□□ 1.51
PDLIM2-221ENST00000622702 PDE8BO95263 885 aa24.47■■□□□ 1.51
PDLIM2-221ENST00000622702 TFCP2Q12800 502 aa24.47■■□□□ 1.51
PDLIM2-221ENST00000622702 ANKIB1Q9P2G1 1089 aa24.47■■□□□ 1.51
PDLIM2-221ENST00000622702 DUOX1Q9NRD9 1551 aa24.47■■□□□ 1.51
PDLIM2-221ENST00000622702 APBB1O00213 710 aa24.46■■□□□ 1.51
PDLIM2-221ENST00000622702 GPR108Q9NPR9 543 aa24.46■■□□□ 1.51
PDLIM2-221ENST00000622702 PODXL2Q9NZ53 605 aa24.46■■□□□ 1.51
PDLIM2-221ENST00000622702 A0A1B0GUL6 1792 aa24.46■■□□□ 1.51
PDLIM2-221ENST00000622702 LTBP1Q14766 1721 aa24.46■■□□□ 1.51
PDLIM2-221ENST00000622702 XDHP47989 1333 aa24.45■■□□□ 1.51
PDLIM2-221ENST00000622702 C6orf229H3BNL8 230 aa24.45■■□□□ 1.51
PDLIM2-221ENST00000622702 PPIP5K2O43314 1243 aa24.45■■□□□ 1.51
PDLIM2-221ENST00000622702 LARGE2Q8N3Y3 721 aa24.45■■□□□ 1.51
PDLIM2-221ENST00000622702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.45■■□□□ 1.51
PDLIM2-221ENST00000622702 AOC3Q16853 763 aa24.45■■□□□ 1.5
PDLIM2-221ENST00000622702 HELBQ8NG08 1087 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-221ENST00000622702 JDP2Q8WYK2 163 aa24.45■■□□□ 1.5
PDLIM2-221ENST00000622702 VPS33BQ9H267 617 aa24.45■■□□□ 1.5
PDLIM2-221ENST00000622702 POLLQ9UGP5 575 aa24.45■■□□□ 1.5
PDLIM2-221ENST00000622702 TAF5LO75529 589 aa24.44■■□□□ 1.5
PDLIM2-221ENST00000622702 NUCB1Q02818 461 aa24.44■■□□□ 1.5
PDLIM2-221ENST00000622702 ANKRD45Q5TZF3 282 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms