RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 CDV3Q9UKY7 258 aaKnown RBP6.85□□□□□ -1.31
RPRD1B-209ENST00000622494 TLL2Q9Y6L7 1015 aa6.85□□□□□ -1.31
RPRD1B-209ENST00000622494 INSRP06213 1382 aa6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 CYP27B1O15528 508 aa6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 MCCD1P59942 119 aaPredicted RBP6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 VAC14Q08AM6 782 aa6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 LAPTM4AQ15012 233 aa6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 AMIGO3Q86WK7 504 aa6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 CYP4X1Q8N118 509 aa6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 SYTL4Q96C24 671 aaPredicted RBP6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 POLKQ9UBT6 870 aa6.84□□□□□ -1.31
RPRD1B-209ENST00000622494 RTL1A6NKG5 1358 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 FLT4P35916 1363 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 TAF1LQ8IZX4 1826 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 GFRA3O60609 400 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 ADH1CP00326 375 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 SMPD1P17405 629 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 GRM5P41594 1212 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 EIF4A2Q14240 407 aaKnown RBP6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 SLC10A4Q96EP9 437 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 ZMYND15Q9H091 742 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 BCL9O00512 1426 aa6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 VIRMAQ69YN4 1812 aaKnown RBP6.83□□□□□ -1.32
RPRD1B-209ENST00000622494 WASHC2AQ641Q2 1341 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 C5P01031 1676 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 ESPNB1AK53 854 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 J3QL48 77 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 SOX11P35716 441 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 WWC1Q8IX03 1113 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 ZCRB1Q8TBF4 217 aaKnown RBP6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 ZNF592Q92610 1267 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 IRX2Q9BZI1 471 aaPredicted RBP6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 ZNF330Q9Y3S2 320 aaPredicted RBP6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 NCAPD2Q15021 1401 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 PARD3Q8TEW0 1356 aa6.82□□□□□ -1.32
RPRD1B-209ENST00000622494 CGNL1Q0VF96 1302 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 TTC24A2A3L6 582 aaPredicted RBP6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 PLSCR1O15162 318 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 TRAK2O60296 914 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 ALDH1A1P00352 501 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 AVPP01185 164 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 NR5A1Q13285 461 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 CC2D1BQ5T0F9 858 aaKnown RBP6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 DZIP3Q86Y13 1208 aaKnown RBP6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 CDCA7Q9BWT1 371 aaPredicted RBP6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 ALG2Q9H553 416 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 UTRNP46939 3433 aa6.81□□□□□ -1.32
RPRD1B-209ENST00000622494 GOLGB1Q14789 3259 aaKnown RBP6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 POM121CA8CG34 1229 aa6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 DGAT1O75907 488 aa6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 TATP17735 454 aaPredicted RBP6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 SLC15A2Q16348 729 aa6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 MSL1Q68DK7 614 aa6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 MPRIPQ6WCQ1 1025 aa6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 ERICH6Q7L0X2 663 aa6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 VASH1Q7L8A9 365 aaPredicted RBP6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 SMG6Q86US8 1419 aaKnown RBP6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 KCTD15Q96SI1 283 aaPredicted RBP6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 PCDHB9Q9Y5E1 797 aa6.8□□□□□ -1.32
RPRD1B-209ENST00000622494 PNPLA7Q6ZV29 1317 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 KDM6AO15550 1401 aaPredicted RBP6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 NBPF20Q3BBV1 942 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 CDCA8Q53HL2 280 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 MORC1Q86VD1 984 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 ADAMTS19Q8TE59 1207 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 RAPGEF4Q8WZA2 1011 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 STK32BQ9NY57 414 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 UBR3Q6ZT12 1888 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 C4BP0C0L5 1744 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 QSER1Q2KHR3 1735 aa6.79□□□□□ -1.32
RPRD1B-209ENST00000622494 NR3C2P08235 984 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 HMOX1P09601 288 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 NNTQ13423 1086 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 ARID5BQ14865 1188 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 INTS6LQ5JSJ4 861 aaKnown RBP6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 PIGBQ92521 554 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 SLC4A9Q96Q91 983 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 KLF16Q9BXK1 252 aaPredicted RBP6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 CEP126Q9P2H0 1117 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 ASAP1Q9ULH1 1129 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 COL24A1Q17RW2 1714 aa6.78□□□□□ -1.32
RPRD1B-209ENST00000622494 IGSF1Q8N6C5 1336 aa6.77□□□□□ -1.32
RPRD1B-209ENST00000622494 TJP1Q07157 1748 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 GIGYF1O75420 1035 aaPredicted RBP6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 PHKG2P15735 406 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 FSHRP23945 695 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 ITPK1Q13572 414 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 CRIPAKQ8N1N5 446 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 HPS1Q92902 700 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 CCNL1Q9UK58 526 aaPredicted RBP6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 WWC3Q9ULE0 1092 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 WASF2Q9Y6W5 498 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 PALLDQ8WX93 1383 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 SCN11AQ9UI33 1791 aa6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 MYH14Q7Z406 1995 aaKnown RBP6.77□□□□□ -1.33
RPRD1B-209ENST00000622494 PCDH11XQ9BZA7 1347 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 PCDH11YQ9BZA8 1340 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms