RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 UFL1O94874 794 aa26.16■■□□□ 1.78
SMC6-210ENST00000621152 DCAF8Q5TAQ9 597 aa26.16■■□□□ 1.78
SMC6-210ENST00000621152 KCNQ5Q9NR82 932 aa26.16■■□□□ 1.78
SMC6-210ENST00000621152 CNOT7Q9UIV1 285 aaKnown RBP26.16■■□□□ 1.78
SMC6-210ENST00000621152 LTBP1Q14766 1721 aa26.16■■□□□ 1.78
SMC6-210ENST00000621152 DUOX1Q9NRD9 1551 aa26.16■■□□□ 1.78
SMC6-210ENST00000621152 F6X3S4 739 aa26.15■■□□□ 1.78
SMC6-210ENST00000621152 ECE2O60344 883 aa26.15■■□□□ 1.78
SMC6-210ENST00000621152 ZBTB12Q9Y330 459 aaPredicted RBP26.15■■□□□ 1.78
SMC6-210ENST00000621152 LRRC37AA6NMS7 1700 aa26.14■■□□□ 1.78
SMC6-210ENST00000621152 H7C1D1 291 aa26.14■■□□□ 1.78
SMC6-210ENST00000621152 PSMD14O00487 310 aa26.14■■□□□ 1.78
SMC6-210ENST00000621152 ADAMTSL1Q8N6G6 1762 aa26.13■■□□□ 1.77
SMC6-210ENST00000621152 ATP2B4P23634 1241 aa26.12■■□□□ 1.77
SMC6-210ENST00000621152 CASP7P55210 303 aa26.12■■□□□ 1.77
SMC6-210ENST00000621152 FMR1Q06787 632 aaKnown RBP eCLIP26.12■■□□□ 1.771e-6■■■■□ 21.4
SMC6-210ENST00000621152 DPF2Q92785 391 aa26.12■■□□□ 1.77
SMC6-210ENST00000621152 PLA2G12BQ9BX93 195 aa26.12■■□□□ 1.77
SMC6-210ENST00000621152 BSDC1Q9NW68 430 aaPredicted RBP26.12■■□□□ 1.77
SMC6-210ENST00000621152 XDHP47989 1333 aa26.12■■□□□ 1.77
SMC6-210ENST00000621152 ZNF521Q96K83 1311 aa26.12■■□□□ 1.77
SMC6-210ENST00000621152 SHTN1A0MZ66 631 aa26.11■■□□□ 1.77
SMC6-210ENST00000621152 MINPP1Q9UNW1 487 aa26.11■■□□□ 1.77
SMC6-210ENST00000621152 HIRAP54198 1017 aaPredicted RBP26.1■■□□□ 1.77
SMC6-210ENST00000621152 BEND3Q5T5X7 828 aa26.1■■□□□ 1.77
SMC6-210ENST00000621152 MICALL2Q8IY33 904 aa26.1■■□□□ 1.77
SMC6-210ENST00000621152 CSF1RP07333 972 aa26.09■■□□□ 1.77
SMC6-210ENST00000621152 IGHMBP2P38935 993 aaKnown RBP26.09■■□□□ 1.77
SMC6-210ENST00000621152 PGAP2Q9UHJ9 254 aa26.09■■□□□ 1.77
SMC6-210ENST00000621152 RTL9Q8NET4 1388 aa26.08■■□□□ 1.77
SMC6-210ENST00000621152 WTIPA6NIX2 430 aaPredicted RBP26.08■■□□□ 1.77
SMC6-210ENST00000621152 TRAF5O00463 557 aa26.08■■□□□ 1.77
SMC6-210ENST00000621152 ITGA6P23229 1130 aa26.08■■□□□ 1.77
SMC6-210ENST00000621152 TRPM4Q8TD43 1214 aa26.08■■□□□ 1.77
SMC6-210ENST00000621152 CNTNAP1P78357 1384 aa26.07■■□□□ 1.76
SMC6-210ENST00000621152 DEFB115Q30KQ5 88 aa26.07■■□□□ 1.76
SMC6-210ENST00000621152 SAMD7Q7Z3H4 446 aa26.07■■□□□ 1.76
SMC6-210ENST00000621152 ZC3H15Q8WU90 426 aaKnown RBP26.07■■□□□ 1.76
SMC6-210ENST00000621152 ABT1Q9ULW3 272 aaKnown RBP26.07■■□□□ 1.76
SMC6-210ENST00000621152 VIL1P09327 827 aaKnown RBP26.06■■□□□ 1.76
SMC6-210ENST00000621152 HSPA1AP0DMV8 641 aaKnown RBP26.06■■□□□ 1.76
SMC6-210ENST00000621152 HSPA1BP0DMV9 641 aaKnown RBP26.06■■□□□ 1.76
SMC6-210ENST00000621152 RPS12P25398 132 aaKnown RBP26.06■■□□□ 1.76
SMC6-210ENST00000621152 VEGFBP49765 207 aa26.06■■□□□ 1.76
SMC6-210ENST00000621152 FAM161AQ3B820 660 aa26.06■■□□□ 1.76
SMC6-210ENST00000621152 RBM26Q5T8P6 1007 aaKnown RBP26.06■■□□□ 1.76
SMC6-210ENST00000621152 SLC4A10Q6U841 1118 aa26.06■■□□□ 1.76
SMC6-210ENST00000621152 MPHOSPH8Q99549 860 aa26.06■■□□□ 1.76
SMC6-210ENST00000621152 E9PSI1 815 aa26.05■■□□□ 1.76
SMC6-210ENST00000621152 CCT4P50991 539 aaKnown RBP26.05■■□□□ 1.76
SMC6-210ENST00000621152 CST9Q5W186 159 aa26.05■■□□□ 1.76
SMC6-210ENST00000621152 GLIS2Q9BZE0 524 aaPredicted RBP26.05■■□□□ 1.76
SMC6-210ENST00000621152 CACNA1FO60840 1977 aa26.05■■□□□ 1.76
SMC6-210ENST00000621152 FOXO4P98177 505 aa26.04■■□□□ 1.76
SMC6-210ENST00000621152 TBC1D10BQ4KMP7 808 aaPredicted RBP26.04■■□□□ 1.76
SMC6-210ENST00000621152 ANKRD18BA2A2Z9 1011 aa26.03■■□□□ 1.76
SMC6-210ENST00000621152 RASSF10A6NK89 507 aa26.03■■□□□ 1.76
SMC6-210ENST00000621152 IFFO2Q5TF58 517 aa26.03■■□□□ 1.76
SMC6-210ENST00000621152 CDC37L1Q7L3B6 337 aa26.03■■□□□ 1.76
SMC6-210ENST00000621152 PODNQ7Z5L7 613 aa26.03■■□□□ 1.76
SMC6-210ENST00000621152 C9orf78Q9NZ63 289 aaPredicted RBP26.03■■□□□ 1.76
SMC6-210ENST00000621152 SLFN5Q08AF3 891 aa26.02■■□□□ 1.76
SMC6-210ENST00000621152 ANKRD2Q9GZV1 360 aa26.02■■□□□ 1.76
SMC6-210ENST00000621152 LEMD3Q9Y2U8 911 aa26.02■■□□□ 1.76
SMC6-210ENST00000621152 CHMP3Q9Y3E7 222 aa26.02■■□□□ 1.76
SMC6-210ENST00000621152 GRM8O00222 908 aa26.01■■□□□ 1.75
SMC6-210ENST00000621152 ALDH1L1O75891 902 aa26.01■■□□□ 1.75
SMC6-210ENST00000621152 USP48Q86UV5 1035 aa26.01■■□□□ 1.75
SMC6-210ENST00000621152 MRPL50Q8N5N7 158 aaKnown RBP26.01■■□□□ 1.75
SMC6-210ENST00000621152 SRCIN1Q9C0H9 1055 aa26.01■■□□□ 1.75
SMC6-210ENST00000621152 EGFRP00533 1210 aa26■■□□□ 1.75
SMC6-210ENST00000621152 IFIT5Q13325 482 aaKnown RBP26■■□□□ 1.75
SMC6-210ENST00000621152 RSBN1LQ6PCB5 846 aaPredicted RBP26■■□□□ 1.75
SMC6-210ENST00000621152 LMBR1LQ6UX01 489 aa26■■□□□ 1.75
SMC6-210ENST00000621152 USP17L3A6NCW0 530 aa25.99■■□□□ 1.75
SMC6-210ENST00000621152 USP17L4A6NCW7 530 aa25.99■■□□□ 1.75
SMC6-210ENST00000621152 CCER2I3L3R5 266 aa25.99■■□□□ 1.75
SMC6-210ENST00000621152 CELF2O95319 508 aaKnown RBP25.99■■□□□ 1.75
SMC6-210ENST00000621152 EPHA10Q5JZY3 1008 aa25.99■■□□□ 1.75
SMC6-210ENST00000621152 COL13A1Q5TAT6 717 aaPredicted RBP25.99■■□□□ 1.75
SMC6-210ENST00000621152 USP17L1Q7RTZ2 530 aa25.99■■□□□ 1.75
SMC6-210ENST00000621152 AGBL3Q8NEM8 1001 aa25.99■■□□□ 1.75
SMC6-210ENST00000621152 CDCA7LQ96GN5 454 aa25.99■■□□□ 1.75
SMC6-210ENST00000621152 ZNF804BA4D1E1 1349 aa25.98■■□□□ 1.75
SMC6-210ENST00000621152 CHRNDQ07001 517 aa25.98■■□□□ 1.75
SMC6-210ENST00000621152 TXNRD3Q86VQ6 643 aa25.98■■□□□ 1.75
SMC6-210ENST00000621152 MED23Q9ULK4 1368 aa25.97■■□□□ 1.75
SMC6-210ENST00000621152 WDR33Q9C0J8 1336 aaKnown RBP25.97■■□□□ 1.75
SMC6-210ENST00000621152 MYH3P11055 1940 aa25.97■■□□□ 1.75
SMC6-210ENST00000621152 PAXIP1Q6ZW49 1069 aaPredicted RBP25.97■■□□□ 1.75
SMC6-210ENST00000621152 ZNF408Q9H9D4 720 aa25.97■■□□□ 1.75
SMC6-210ENST00000621152 KCNJ4P48050 445 aa25.96■■□□□ 1.75
SMC6-210ENST00000621152 KIF4BQ2VIQ3 1234 aa25.96■■□□□ 1.75
SMC6-210ENST00000621152 SSH1Q8WYL5 1049 aa25.96■■□□□ 1.75
SMC6-210ENST00000621152 DCPSQ96C86 337 aaKnown RBP25.96■■□□□ 1.75
SMC6-210ENST00000621152 COA1Q9GZY4 146 aa25.96■■□□□ 1.75
SMC6-210ENST00000621152 TLL2Q9Y6L7 1015 aa25.96■■□□□ 1.75
SMC6-210ENST00000621152 CCDC57Q2TAC2 916 aa25.95■■□□□ 1.74
SMC6-210ENST00000621152 DLK2Q6UY11 383 aa25.95■■□□□ 1.74
SMC6-210ENST00000621152 HELBQ8NG08 1087 aaPredicted RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms