RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 ANKIB1Q9P2G1 1089 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 RAD50Q92878 1312 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 SKILP12757 684 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 SSR1P43307 286 aaKnown RBP9.62□□□□□ -0.87
ALMS1-208ENST00000620466 CLTCL1P53675 1640 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 ARHGEF10O15013 1369 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 RNMTO43148 476 aaKnown RBP9.62□□□□□ -0.87
ALMS1-208ENST00000620466 HSP90AB3PQ58FF7 597 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 IQCEQ6IPM2 695 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
ALMS1-208ENST00000620466 RTL1A6NKG5 1358 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 LUZP1Q86V48 1076 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 LINS1Q8NG48 757 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 KIAA0232Q92628 1395 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 LMBR1LQ6UX01 489 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 TET3O43151 1660 aa9.62□□□□□ -0.87
ALMS1-208ENST00000620466 SLC27A2O14975 620 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 KCNG4Q8TDN1 519 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 ZMYND15Q9H091 742 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 ZHX1Q9UKY1 873 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 RANBP6O60518 1105 aaKnown RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 RPS6KB1P23443 525 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 SYKP43405 635 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 CAVIN4Q5BKX8 364 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 TAF3Q5VWG9 929 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 JAKMIP3Q5VZ66 844 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 PPP4R3AQ6IN85 833 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 CHST3Q7LGC8 479 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 DNAI2Q9GZS0 605 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 TSPYL1Q9H0U9 437 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 POLR1AO95602 1720 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 POLR3GO15318 223 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 LDHAL6AQ6ZMR3 332 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 NUP88Q99567 741 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 ALG1Q9BT22 464 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 RNF41Q9H4P4 317 aaPredicted RBP9.61□□□□□ -0.87
ALMS1-208ENST00000620466 FAM135BQ49AJ0 1406 aa9.61□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC102BQ68D86 513 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 PTPDC1A2A3K4 754 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 SGSM2O43147 1006 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 ZNF397Q8NF99 534 aaPredicted RBP9.6□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC97Q96F63 343 aaPredicted RBP9.6□□□□□ -0.87
ALMS1-208ENST00000620466 CENPHQ9H3R5 247 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 MAP3K4Q9Y6R4 1608 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 UBASH3AP57075 661 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 RPGRQ92834 1020 aaKnown RBP9.6□□□□□ -0.87
ALMS1-208ENST00000620466 ANTXR1Q9H6X2 564 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 TMEM63CQ9P1W3 806 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 RNF113AO15541 343 aaKnown RBP9.6□□□□□ -0.87
ALMS1-208ENST00000620466 MFSD6Q6ZSS7 791 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 MARCKSP29966 332 aaPredicted RBP9.6□□□□□ -0.87
ALMS1-208ENST00000620466 DZIP1Q86YF9 867 aaKnown RBP9.6□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC94Q9BW85 323 aaPredicted RBP9.6□□□□□ -0.87
ALMS1-208ENST00000620466 GBP3Q9H0R5 595 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 ZNF287Q9HBT7 754 aa9.6□□□□□ -0.87
ALMS1-208ENST00000620466 ZFYVE16Q7Z3T8 1539 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 PRC1O43663 620 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 IL15P40933 162 aaPredicted RBP9.59□□□□□ -0.87
ALMS1-208ENST00000620466 PPM1FP49593 454 aaPredicted RBP9.59□□□□□ -0.87
ALMS1-208ENST00000620466 NLRP5P59047 1200 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC129Q6ZRS4 1044 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 CATIPQ7Z7H3 387 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 TAX1BP1Q86VP1 789 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 CTCFLQ8NI51 663 aaPredicted RBP9.59□□□□□ -0.87
ALMS1-208ENST00000620466 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 POTEJP0CG39 1038 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 HSPA4P34932 840 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 PKP1Q13835 747 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 IP6K1Q92551 441 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 MADDQ8WXG6 1647 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 ZFYP08048 801 aaPredicted RBP9.59□□□□□ -0.87
ALMS1-208ENST00000620466 FAM227BQ96M60 508 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 SPHKAPQ2M3C7 1700 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 NFATC2IPQ8NCF5 419 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 BRD1O95696 1058 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
ALMS1-208ENST00000620466 IQCA1Q86XH1 822 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 MKNK2Q9HBH9 465 aa9.59□□□□□ -0.87
ALMS1-208ENST00000620466 CHD1O14646 1710 aa9.59□□□□□ -0.88
ALMS1-208ENST00000620466 DTNBO60941 627 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 CD2BP2O95400 341 aaKnown RBP9.58□□□□□ -0.88
ALMS1-208ENST00000620466 MYCNP04198 464 aaPredicted RBP9.58□□□□□ -0.88
ALMS1-208ENST00000620466 CCDC96Q2M329 555 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 GPT2Q8TD30 523 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 CUL5Q93034 780 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 TSG101Q99816 390 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
ALMS1-208ENST00000620466 GOLGA6L9A6NEM1 432 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 SPTLC2O15270 562 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 ZBTB43O43298 467 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
ALMS1-208ENST00000620466 YEATS4O95619 227 aa9.58□□□□□ -0.88
ALMS1-208ENST00000620466 BMS1Q14692 1282 aaKnown RBP9.58□□□□□ -0.88
ALMS1-208ENST00000620466 SPA17Q15506 151 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms