RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 CCDC24Q8N4L8 307 aa13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 SIL1Q9H173 461 aa13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 EXOC6BQ9Y2D4 811 aa13.6□□□□□ -0.23
SNORD3D-201ENST00000619178 CC2D2BQ6DHV5 1058 aa13.59□□□□□ -0.23
SNORD3D-201ENST00000619178 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
SNORD3D-201ENST00000619178 GPR108Q9NPR9 543 aa13.59□□□□□ -0.23
SNORD3D-201ENST00000619178 METTL24Q5JXM2 366 aa13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 RHPN1Q8TCX5 695 aa13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 FER1L6Q2WGJ9 1857 aa13.58□□□□□ -0.24
SNORD3D-201ENST00000619178 APBB1O00213 710 aa13.57□□□□□ -0.24
SNORD3D-201ENST00000619178 NUCB1Q02818 461 aa13.57□□□□□ -0.24
SNORD3D-201ENST00000619178 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
SNORD3D-201ENST00000619178 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
SNORD3D-201ENST00000619178 ZNF594Q96JF6 807 aaPredicted RBP13.57□□□□□ -0.24
SNORD3D-201ENST00000619178 SEC31BQ9NQW1 1179 aa13.57□□□□□ -0.24
SNORD3D-201ENST00000619178 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 PPEF1O14829 653 aaPredicted RBP13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 IFIT2P09913 472 aaKnown RBP13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 PTGER2P43116 358 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 KCNJ4P48050 445 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 SP8Q8IXZ3 490 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 TTLL6Q8N841 843 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 KLHDC4Q8TBB5 520 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 PIM2Q9P1W9 311 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 LTBP1Q14766 1721 aa13.56□□□□□ -0.24
SNORD3D-201ENST00000619178 PDE8BO95263 885 aa13.55□□□□□ -0.24
SNORD3D-201ENST00000619178 IFIT1P09914 478 aaKnown RBP13.55□□□□□ -0.24
SNORD3D-201ENST00000619178 SLC5A1P13866 664 aa13.55□□□□□ -0.24
SNORD3D-201ENST00000619178 PUM3Q15397 648 aaKnown RBP13.55□□□□□ -0.24
SNORD3D-201ENST00000619178 ATG9AQ7Z3C6 839 aa13.55□□□□□ -0.24
SNORD3D-201ENST00000619178 CELF1Q92879 486 aaKnown RBP13.55□□□□□ -0.24
SNORD3D-201ENST00000619178 XDHP47989 1333 aa13.55□□□□□ -0.24
SNORD3D-201ENST00000619178 CHRNDQ07001 517 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 UBE4AQ14139 1066 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 GORABQ5T7V8 394 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 ANKIB1Q9P2G1 1089 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 LEMD3Q9Y2U8 911 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 PSME4Q14997 1843 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 ZNF609O15014 1411 aa13.54□□□□□ -0.24
SNORD3D-201ENST00000619178 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 ERC2O15083 957 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 SASH1O94885 1247 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 TFCP2Q12800 502 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 ATP2B3Q16720 1220 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 AACSQ86V21 672 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 SUPT20HQ8NEM7 779 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 LPIN2Q92539 896 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 MINPP1Q9UNW1 487 aa13.53□□□□□ -0.24
SNORD3D-201ENST00000619178 DPEP1P16444 411 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 CHRNA5P30532 468 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 TNNI3KQ59H18 835 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 DALRD3Q5D0E6 543 aaKnown RBP13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 RTKN2Q8IZC4 609 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 EYA3Q99504 573 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 IL1RAPL2Q9NP60 686 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 FPGT-TNNI3KV9GXZ4 949 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 AOX1Q06278 1338 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.25
SNORD3D-201ENST00000619178 SBF1O95248 1867 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 DUOX1Q9NRD9 1551 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 CCDC93Q567U6 631 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 MPNDQ8N594 471 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 GGA1Q9UJY5 639 aa13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 NSFL1CQ9UNZ2 370 aaKnown RBP13.51□□□□□ -0.25
SNORD3D-201ENST00000619178 DOCK2Q92608 1830 aa13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 COL4A1P02462 1669 aa13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 ZNF804BA4D1E1 1349 aa13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 MX1P20591 662 aa13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 DPP8Q6V1X1 898 aaPredicted RBP13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 VPS37DQ86XT2 251 aa13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 VGLL2Q8N8G2 317 aa13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 MYO5AQ9Y4I1 1855 aaKnown RBP13.5□□□□□ -0.25
SNORD3D-201ENST00000619178 SMARCA5O60264 1052 aaPredicted RBP13.49□□□□□ -0.25
SNORD3D-201ENST00000619178 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
SNORD3D-201ENST00000619178 VPS33BQ9H267 617 aa13.49□□□□□ -0.25
SNORD3D-201ENST00000619178 ECHDC1Q9NTX5 307 aa13.49□□□□□ -0.25
SNORD3D-201ENST00000619178 G3V3G9 751 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms