RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ARAP2Q8WZ64 1704 aa10.58□□□□□ -0.72
VPS11-206ENST00000614944 CCDC172P0C7W6 258 aa10.58□□□□□ -0.72
VPS11-206ENST00000614944 CAPN2P17655 700 aa10.58□□□□□ -0.72
VPS11-206ENST00000614944 AIMP1Q12904 312 aaKnown RBP10.58□□□□□ -0.72
VPS11-206ENST00000614944 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
VPS11-206ENST00000614944 SALL3Q9BXA9 1300 aa10.57□□□□□ -0.72
VPS11-206ENST00000614944 CWF19L2Q2TBE0 894 aaKnown RBP10.57□□□□□ -0.72
VPS11-206ENST00000614944 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
VPS11-206ENST00000614944 BECN1Q14457 450 aa10.57□□□□□ -0.72
VPS11-206ENST00000614944 COPRSQ9NQ92 184 aa10.57□□□□□ -0.72
VPS11-206ENST00000614944 SUCLG2Q96I99 432 aa10.57□□□□□ -0.72
VPS11-206ENST00000614944 NCAPGQ9BPX3 1015 aa10.57□□□□□ -0.72
VPS11-206ENST00000614944 GZF1Q9H116 711 aaPredicted RBP10.57□□□□□ -0.72
VPS11-206ENST00000614944 C1orf115Q9H7X2 142 aa10.57□□□□□ -0.72
VPS11-206ENST00000614944 CSF1RP07333 972 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 FOXO4P98177 505 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 SASS6Q6UVJ0 657 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 NLRP10Q86W26 655 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 CCNL1Q9UK58 526 aaPredicted RBP10.56□□□□□ -0.72
VPS11-206ENST00000614944 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
VPS11-206ENST00000614944 PPP1R42Q7Z4L9 355 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 STAP2Q9UGK3 403 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 NARFQ9UHQ1 456 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 A0A1B0GUL6 1792 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 PNMA6EA0A0J9YXQ4 647 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
VPS11-206ENST00000614944 ATP2B3Q16720 1220 aa10.56□□□□□ -0.72
VPS11-206ENST00000614944 SPEF2Q9C093 1822 aa10.55□□□□□ -0.72
VPS11-206ENST00000614944 A0A0G2JS52 829 aa10.55□□□□□ -0.72
VPS11-206ENST00000614944 CIAO1O76071 339 aa10.55□□□□□ -0.72
VPS11-206ENST00000614944 SSFA2P28290 1259 aa10.55□□□□□ -0.72
VPS11-206ENST00000614944 SSR1P43307 286 aaKnown RBP10.55□□□□□ -0.72
VPS11-206ENST00000614944 CSPP1Q1MSJ5 1256 aa10.55□□□□□ -0.72
VPS11-206ENST00000614944 KAT6BQ8WYB5 2073 aa10.55□□□□□ -0.72
VPS11-206ENST00000614944 GPR108Q9NPR9 543 aa10.55□□□□□ -0.72
VPS11-206ENST00000614944 BMP2KLQ5H9B9 411 aa10.54□□□□□ -0.72
VPS11-206ENST00000614944 KIF1BPQ96EK5 621 aa10.54□□□□□ -0.72
VPS11-206ENST00000614944 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
VPS11-206ENST00000614944 BICC1Q9H694 974 aaKnown RBP10.54□□□□□ -0.72
VPS11-206ENST00000614944 CALCOCO1Q9P1Z2 691 aa10.54□□□□□ -0.72
VPS11-206ENST00000614944 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
VPS11-206ENST00000614944 SLC10A5Q5PT55 438 aa10.54□□□□□ -0.72
VPS11-206ENST00000614944 OTUD6BQ8N6M0 293 aa10.54□□□□□ -0.72
VPS11-206ENST00000614944 SRGAP3O43295 1099 aa10.53□□□□□ -0.72
VPS11-206ENST00000614944 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
VPS11-206ENST00000614944 ZBTB3Q9H5J0 574 aa10.53□□□□□ -0.72
VPS11-206ENST00000614944 CCDC173Q0VFZ6 552 aa10.53□□□□□ -0.72
VPS11-206ENST00000614944 HLFQ16534 295 aa10.53□□□□□ -0.72
VPS11-206ENST00000614944 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
VPS11-206ENST00000614944 PTF1AQ7RTS3 328 aa10.53□□□□□ -0.72
VPS11-206ENST00000614944 PIP4K2AP48426 406 aaPredicted RBP10.52□□□□□ -0.72
VPS11-206ENST00000614944 POTEAQ6S8J7 498 aa10.52□□□□□ -0.72
VPS11-206ENST00000614944 FLAD1Q8NFF5 587 aa10.52□□□□□ -0.72
VPS11-206ENST00000614944 RTCBQ9Y3I0 505 aaKnown RBP10.52□□□□□ -0.72
VPS11-206ENST00000614944 UBN2Q6ZU65 1347 aa10.52□□□□□ -0.72
VPS11-206ENST00000614944 ANKRD45Q5TZF3 282 aa10.52□□□□□ -0.73
VPS11-206ENST00000614944 PDE8AO60658 829 aa10.52□□□□□ -0.73
VPS11-206ENST00000614944 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
VPS11-206ENST00000614944 TTC41PQ6P2S7 1318 aa10.52□□□□□ -0.73
VPS11-206ENST00000614944 ABCC12Q96J65 1359 aa10.52□□□□□ -0.73
VPS11-206ENST00000614944 NTSR2O95665 410 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 GABPB1Q06547 395 aaPredicted RBP10.51□□□□□ -0.73
VPS11-206ENST00000614944 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 UBE3BQ7Z3V4 1068 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 NBPF5PQ86XG9 351 aaPredicted RBP10.51□□□□□ -0.73
VPS11-206ENST00000614944 AKT1S1Q96B36 256 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 NYXQ9GZU5 481 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 MFAP1P55081 439 aaKnown RBP10.51□□□□□ -0.73
VPS11-206ENST00000614944 RHPN1Q8TCX5 695 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 UTP14AQ9BVJ6 771 aaKnown RBP10.51□□□□□ -0.73
VPS11-206ENST00000614944 PTPN12Q05209 780 aaKnown RBP10.51□□□□□ -0.73
VPS11-206ENST00000614944 EPHA10Q5JZY3 1008 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 SGSM3Q96HU1 749 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 BCL2L12Q9HB09 334 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 LRRC4BQ9NT99 713 aa10.51□□□□□ -0.73
VPS11-206ENST00000614944 RBM28Q9NW13 759 aaKnown RBP10.51□□□□□ -0.73
VPS11-206ENST00000614944 ATP5J2-PTCD1G3V325 749 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 C8orf34Q49A92 452 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 CTR9Q6PD62 1173 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 CCDC125Q86Z20 511 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 LRRC37AA6NMS7 1700 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 AK9Q5TCS8 1911 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 SPDYE4A6NLX3 237 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 RFX7Q2KHR2 1363 aa10.5□□□□□ -0.73
VPS11-206ENST00000614944 TXNRD1Q16881 649 aa10.49□□□□□ -0.73
VPS11-206ENST00000614944 FEZ2Q9UHY8 353 aaPredicted RBP10.49□□□□□ -0.73
VPS11-206ENST00000614944 CARMIL3Q8ND23 1372 aa10.49□□□□□ -0.73
VPS11-206ENST00000614944 EPB41L2O43491 1005 aaKnown RBP10.49□□□□□ -0.73
VPS11-206ENST00000614944 CTSWP56202 376 aa10.49□□□□□ -0.73
VPS11-206ENST00000614944 SF3B3Q15393 1217 aaKnown RBP10.49□□□□□ -0.73
VPS11-206ENST00000614944 TTC22Q5TAA0 569 aa10.49□□□□□ -0.73
VPS11-206ENST00000614944 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
VPS11-206ENST00000614944 TRIM37O94972 964 aa10.49□□□□□ -0.73
VPS11-206ENST00000614944 IL15P40933 162 aaPredicted RBP10.49□□□□□ -0.73
VPS11-206ENST00000614944 TRAPPC3LQ5T215 181 aa10.49□□□□□ -0.73
VPS11-206ENST00000614944 PROM2Q8N271 834 aa10.49□□□□□ -0.73
VPS11-206ENST00000614944 ZNF513Q8N8E2 541 aaPredicted RBP10.49□□□□□ -0.73
VPS11-206ENST00000614944 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
VPS11-206ENST00000614944 PPP1R9BQ96SB3 815 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms