RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 SPECC1L-ADORA2AF8WAN1 911 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 GABPAQ06546 454 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
ALMS1-206ENST00000613296 SYF2O95926 243 aaKnown RBP9.47□□□□□ -0.89
ALMS1-206ENST00000613296 RPGRIP1LQ68CZ1 1315 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 DNAJC8O75937 253 aaPredicted RBP9.47□□□□□ -0.89
ALMS1-206ENST00000613296 GCKP35557 465 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 CABP4P57796 275 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 SEL1L2Q5TEA6 688 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
ALMS1-206ENST00000613296 KIFC2Q96AC6 838 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 FAF1Q9UNN5 650 aaPredicted RBP9.47□□□□□ -0.89
ALMS1-206ENST00000613296 KRT86O43790 486 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 LRRC27Q9C0I9 530 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 ATF7IPQ6VMQ6 1270 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 IQCA1Q86XH1 822 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 TNNC1P63316 161 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 NOC2LQ9Y3T9 749 aaKnown RBP9.47□□□□□ -0.89
ALMS1-206ENST00000613296 MUM1Q2TAK8 710 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 PFDN1O60925 122 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 BCAR3O75815 825 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 ZNF165P49910 485 aa9.47□□□□□ -0.89
ALMS1-206ENST00000613296 SKILP12757 684 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 TUBB4BP68371 445 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 ITIH3Q06033 890 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 RAB11FIP4Q86YS3 637 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 AFAP1L1Q8TED9 768 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 TRIM6Q9C030 488 aaPredicted RBP9.46□□□□□ -0.89
ALMS1-206ENST00000613296 CABP2Q9NPB3 220 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 BRD4O60885 1362 aaPredicted RBP9.46□□□□□ -0.89
ALMS1-206ENST00000613296 HAUS8Q9BT25 410 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 AFG3L2Q9Y4W6 797 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 UBA7P41226 1012 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 RNF41Q9H4P4 317 aaPredicted RBP9.46□□□□□ -0.89
ALMS1-206ENST00000613296 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.89
ALMS1-206ENST00000613296 RHOXF2BP0C7M4 288 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 RHOXF2Q9BQY4 288 aa9.46□□□□□ -0.89
ALMS1-206ENST00000613296 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 AKNAQ7Z591 1439 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
ALMS1-206ENST00000613296 DNAI1Q9UI46 699 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 TRIM68Q6AZZ1 485 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 ZBTB9Q96C00 473 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 TLDC2A0PJX2 215 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 LRCH2Q5VUJ6 765 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 SMARCC2Q8TAQ2 1214 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 RRAGBQ5VZM2 374 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 RNF10Q8N5U6 811 aaKnown RBP9.46□□□□□ -0.9
ALMS1-206ENST00000613296 STAT6P42226 847 aa9.46□□□□□ -0.9
ALMS1-206ENST00000613296 CDR2Q01850 454 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 PPP1R21Q6ZMI0 780 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 VTI1AQ96AJ9 217 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 RBBP5Q15291 538 aaKnown RBP9.45□□□□□ -0.9
ALMS1-206ENST00000613296 SPDL1Q96EA4 605 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 RB1CC1Q8TDY2 1594 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
ALMS1-206ENST00000613296 INPP5BP32019 993 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 MAP2K2P36507 400 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 ESCO1Q5FWF5 840 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 TMEM57Q8N5G2 664 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 STK10O94804 968 aaKnown RBP9.45□□□□□ -0.9
ALMS1-206ENST00000613296 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 TSGA10Q9BZW7 698 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 HGSO14964 777 aaPredicted RBP9.45□□□□□ -0.9
ALMS1-206ENST00000613296 MX1P20591 662 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 SYT1P21579 422 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 HDXQ7Z353 690 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 AP1ARQ63HQ0 302 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 MX2P20592 715 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 BIRC2Q13490 618 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 MAP3K21Q5TCX8 1036 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 GABPB2Q8TAK5 448 aaPredicted RBP9.45□□□□□ -0.9
ALMS1-206ENST00000613296 KRBA2Q6ZNG9 492 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
ALMS1-206ENST00000613296 TSR2Q969E8 191 aaKnown RBP9.45□□□□□ -0.9
ALMS1-206ENST00000613296 GUCA1BQ9UMX6 200 aa9.45□□□□□ -0.9
ALMS1-206ENST00000613296 UBASH3AP57075 661 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
ALMS1-206ENST00000613296 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.44□□□□□ -0.9
ALMS1-206ENST00000613296 FAM13AO94988 1023 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 CLSTN2Q9H4D0 955 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 ARHGAP25P42331 645 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 ABTB2Q8N961 1025 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 OPHN1O60890 802 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 MCM7P33993 719 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 NDUFAB1O14561 156 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 PNMA8AQ86V59 439 aaPredicted RBP9.44□□□□□ -0.9
ALMS1-206ENST00000613296 PDZD8Q8NEN9 1154 aa9.44□□□□□ -0.9
ALMS1-206ENST00000613296 NLRP6P59044 892 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 TCP11L2Q8N4U5 519 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 BACH2Q9BYV9 841 aa9.43□□□□□ -0.9
ALMS1-206ENST00000613296 C11orf95C9JLR9 678 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms