RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 XAGE2Q96GT9 111 aa21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 ZNF652Q9Y2D9 606 aa21.5■■□□□ 1.03
SEMA6C-209ENST00000613223 TAF5LO75529 589 aa21.49■■□□□ 1.03
SEMA6C-209ENST00000613223 CASTP20810 708 aaKnown RBP21.49■■□□□ 1.03
SEMA6C-209ENST00000613223 RNF20Q5VTR2 975 aa21.49■■□□□ 1.03
SEMA6C-209ENST00000613223 CNNM1Q9NRU3 951 aa21.49■■□□□ 1.03
SEMA6C-209ENST00000613223 ABCC12Q96J65 1359 aa21.49■■□□□ 1.03
SEMA6C-209ENST00000613223 CNTNAP4Q9C0A0 1308 aa21.49■■□□□ 1.03
SEMA6C-209ENST00000613223 BTAF1O14981 1849 aa21.49■■□□□ 1.03
SEMA6C-209ENST00000613223 CYP2E1P05181 493 aaPredicted RBP21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 GORABQ5T7V8 394 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 MEX3CQ5U5Q3 659 aaKnown RBP21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 CLEC17AQ6ZS10 378 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 NOL8Q76FK4 1167 aaKnown RBP21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 LAMB2P55268 1798 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 SLC27A2O14975 620 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 HSP90B1P14625 803 aaKnown RBP21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 ADORA1P30542 326 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 ATP2B3Q16720 1220 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 MCMDC2Q4G0Z9 681 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 TTC39AQ5SRH9 613 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 JAKMIP1Q96N16 626 aaKnown RBP21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 ZSWIM6Q9HCJ5 1215 aa21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 NIP7Q9Y221 180 aaKnown RBP eCLIP21.48■■□□□ 1.03
SEMA6C-209ENST00000613223 DDX60Q8IY21 1712 aaKnown RBP21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 HMG20BQ9P0W2 317 aa21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 RPAP1Q9BWH6 1393 aaPredicted RBP21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 NTSR2O95665 410 aa21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 ADCK5Q3MIX3 580 aa21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 CLEC4GQ6UXB4 293 aa21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 VGLL2Q8N8G2 317 aa21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
SEMA6C-209ENST00000613223 XRCC6P12956 609 aaKnown RBP eCLIP21.46■■□□□ 1.03
SEMA6C-209ENST00000613223 HCLS1P14317 486 aaPredicted RBP21.46■■□□□ 1.03
SEMA6C-209ENST00000613223 AK2P54819 239 aa21.46■■□□□ 1.03
SEMA6C-209ENST00000613223 VPS53Q5VIR6 699 aa21.46■■□□□ 1.03
SEMA6C-209ENST00000613223 USPL1Q5W0Q7 1092 aa21.46■■□□□ 1.03
SEMA6C-209ENST00000613223 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
SEMA6C-209ENST00000613223 HELLSQ9NRZ9 838 aa21.46■■□□□ 1.03
SEMA6C-209ENST00000613223 RGL2O15211 777 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 PSMA5P28066 241 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 PTF1AQ7RTS3 328 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 FAM177BA6PVY3 158 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 PTMSP20962 102 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 HSPA1LP34931 641 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 RUFY3Q7L099 469 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 LIMCH1Q9UPQ0 1083 aa21.45■■□□□ 1.02
SEMA6C-209ENST00000613223 RTL9Q8NET4 1388 aa21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 SCN7AQ01118 1682 aa21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 CHGBP05060 677 aa21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 ZMYM1Q5SVZ6 1142 aa21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 SEC62Q99442 399 aaKnown RBP21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 PDRG1Q9NUG6 133 aa21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 AFF2P51816 1311 aa21.44■■□□□ 1.02
SEMA6C-209ENST00000613223 PDE8BO95263 885 aa21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 LRRFIP1Q32MZ4 808 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 RC3H1Q5TC82 1133 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 ISY1Q9ULR0 285 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 U3KPZ7 1027 aaPredicted RBP21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 MROH5Q6ZUA9 1318 aa21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 RNF113AO15541 343 aaKnown RBP21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 CPA1P15085 419 aa21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 PKP1Q13835 747 aa21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 CCDC152Q4G0S7 254 aa21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 CCDC129Q6ZRS4 1044 aa21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 GZF1Q9H116 711 aaPredicted RBP21.43■■□□□ 1.02
SEMA6C-209ENST00000613223 ATRNO75882 1429 aa21.42■■□□□ 1.02
SEMA6C-209ENST00000613223 FKBP4Q02790 459 aaKnown RBP eCLIP21.42■■□□□ 1.02
SEMA6C-209ENST00000613223 ZNF512BQ96KM6 892 aaPredicted RBP21.42■■□□□ 1.02
SEMA6C-209ENST00000613223 KCNQ4P56696 695 aa21.41■■□□□ 1.02
SEMA6C-209ENST00000613223 BAG4O95429 457 aaKnown RBP21.41■■□□□ 1.02
SEMA6C-209ENST00000613223 MRE11P49959 708 aa21.41■■□□□ 1.02
SEMA6C-209ENST00000613223 KRT32Q14532 448 aa21.41■■□□□ 1.02
SEMA6C-209ENST00000613223 ARAP2Q8WZ64 1704 aa21.41■■□□□ 1.02
SEMA6C-209ENST00000613223 GOLGA6L22H0YM25 854 aa21.4■■□□□ 1.02
SEMA6C-209ENST00000613223 ONECUT3O60422 494 aaPredicted RBP21.4■■□□□ 1.02
SEMA6C-209ENST00000613223 SCARF1Q14162 830 aa21.4■■□□□ 1.02
SEMA6C-209ENST00000613223 PUM3Q15397 648 aaKnown RBP21.4■■□□□ 1.02
SEMA6C-209ENST00000613223 ZFYP08048 801 aaPredicted RBP21.39■■□□□ 1.02
SEMA6C-209ENST00000613223 TRPC5Q9UL62 973 aaPredicted RBP21.39■■□□□ 1.02
SEMA6C-209ENST00000613223 ZDHHC9Q9Y397 364 aa21.39■■□□□ 1.02
SEMA6C-209ENST00000613223 RPS6KA4O75676 772 aa21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 FAM182BQ5T319 152 aa21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 BLOC1S2Q6QNY1 142 aa21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 LPIN2Q92539 896 aa21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 ZSCAN31Q96LW9 406 aaPredicted RBP21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 MPHOSPH8Q99549 860 aa21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 DSCC1Q9BVC3 393 aa21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 SH2B1Q9NRF2 756 aaPredicted RBP21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 CCNL1Q9UK58 526 aaPredicted RBP21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 LY75O60449 1722 aa21.39■■□□□ 1.01
SEMA6C-209ENST00000613223 SBF2Q86WG5 1849 aa21.38■■□□□ 1.01
SEMA6C-209ENST00000613223 MAST3O60307 1309 aa21.38■■□□□ 1.01
SEMA6C-209ENST00000613223 FGFR2P21802 821 aa21.38■■□□□ 1.01
SEMA6C-209ENST00000613223 ZAP70P43403 619 aa21.38■■□□□ 1.01
SEMA6C-209ENST00000613223 SKOR2Q2VWA4 1001 aaPredicted RBP21.38■■□□□ 1.01
SEMA6C-209ENST00000613223 SEC31BQ9NQW1 1179 aa21.38■■□□□ 1.01
SEMA6C-209ENST00000613223 AKAP11Q9UKA4 1901 aa21.38■■□□□ 1.01
SEMA6C-209ENST00000613223 MCAMP43121 646 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms