RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 DTNBO60941 627 aa19.61■□□□□ 0.73
CNOT3-208ENST00000613073 NOLC1Q14978 699 aaKnown RBP eCLIP19.61■□□□□ 0.73
CNOT3-208ENST00000613073 TSPY26PQ9H489 355 aa19.61■□□□□ 0.73
CNOT3-208ENST00000613073 USP25Q9UHP3 1055 aa19.61■□□□□ 0.73
CNOT3-208ENST00000613073 EYA2O00167 538 aa19.6■□□□□ 0.73
CNOT3-208ENST00000613073 CCDC57Q2TAC2 916 aa19.6■□□□□ 0.73
CNOT3-208ENST00000613073 CREB3L3Q68CJ9 461 aa19.6■□□□□ 0.73
CNOT3-208ENST00000613073 MAP4K1Q92918 833 aa19.6■□□□□ 0.73
CNOT3-208ENST00000613073 IL15P40933 162 aaPredicted RBP19.6■□□□□ 0.73
CNOT3-208ENST00000613073 PLCB2Q00722 1185 aa19.6■□□□□ 0.73
CNOT3-208ENST00000613073 RUFY3Q7L099 469 aa19.6■□□□□ 0.73
CNOT3-208ENST00000613073 KIF3AQ9Y496 699 aa19.6■□□□□ 0.73
CNOT3-208ENST00000613073 MAP3K15Q6ZN16 1313 aa19.59■□□□□ 0.73
CNOT3-208ENST00000613073 AHDC1Q5TGY3 1603 aaPredicted RBP19.59■□□□□ 0.73
CNOT3-208ENST00000613073 COL9A3Q14050 684 aaPredicted RBP19.59■□□□□ 0.73
CNOT3-208ENST00000613073 BCL2L12Q9HB09 334 aa19.59■□□□□ 0.73
CNOT3-208ENST00000613073 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
CNOT3-208ENST00000613073 ZKSCAN1P17029 563 aaPredicted RBP19.59■□□□□ 0.73
CNOT3-208ENST00000613073 GTF2E1P29083 439 aaPredicted RBP19.59■□□□□ 0.73
CNOT3-208ENST00000613073 INTS4Q96HW7 963 aaKnown RBP19.59■□□□□ 0.73
CNOT3-208ENST00000613073 SEC62Q99442 399 aaKnown RBP19.59■□□□□ 0.73
CNOT3-208ENST00000613073 DDB1Q16531 1140 aa19.58■□□□□ 0.73
CNOT3-208ENST00000613073 GIGYF2Q6Y7W6 1299 aaKnown RBP19.58■□□□□ 0.73
CNOT3-208ENST00000613073 CCDC129Q6ZRS4 1044 aa19.58■□□□□ 0.73
CNOT3-208ENST00000613073 HAUS7Q99871 368 aa19.58■□□□□ 0.73
CNOT3-208ENST00000613073 U2AF2P26368 475 aaKnown RBP eCLIP19.58■□□□□ 0.72
CNOT3-208ENST00000613073 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
CNOT3-208ENST00000613073 GTPBP4Q9BZE4 634 aaKnown RBP19.58■□□□□ 0.72
CNOT3-208ENST00000613073 TAF6LQ9Y6J9 622 aa19.58■□□□□ 0.72
CNOT3-208ENST00000613073 PDRG1Q9NUG6 133 aa19.57■□□□□ 0.72
CNOT3-208ENST00000613073 A0A1B0GUL7 405 aa19.57■□□□□ 0.72
CNOT3-208ENST00000613073 GOLIM4O00461 696 aa19.57■□□□□ 0.72
CNOT3-208ENST00000613073 SLC27A2O14975 620 aa19.57■□□□□ 0.72
CNOT3-208ENST00000613073 ZBTB38Q8NAP3 1195 aaPredicted RBP19.57■□□□□ 0.72
CNOT3-208ENST00000613073 LIMCH1Q9UPQ0 1083 aa19.57■□□□□ 0.72
CNOT3-208ENST00000613073 SPATA31A1Q5TZJ5 1347 aa19.57■□□□□ 0.72
CNOT3-208ENST00000613073 LARGE1O95461 756 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 PCCAP05165 728 aaPredicted RBP19.56■□□□□ 0.72
CNOT3-208ENST00000613073 TRIM28Q13263 835 aaKnown RBP19.56■□□□□ 0.72
CNOT3-208ENST00000613073 TAF7LQ5H9L4 462 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 PRIMPOLQ96LW4 560 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 CYP46A1Q9Y6A2 500 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 MED23Q9ULK4 1368 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 PDCL2Q8N4E4 241 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 PIBF1Q8WXW3 757 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 TCEANC2Q96MN5 208 aa19.56■□□□□ 0.72
CNOT3-208ENST00000613073 COL22A1Q8NFW1 1626 aaPredicted RBP19.56■□□□□ 0.72
CNOT3-208ENST00000613073 NLRP10Q86W26 655 aa19.55■□□□□ 0.72
CNOT3-208ENST00000613073 ZSWIM6Q9HCJ5 1215 aa19.55■□□□□ 0.72
CNOT3-208ENST00000613073 HMGN5P82970 282 aaKnown RBP19.55■□□□□ 0.72
CNOT3-208ENST00000613073 SNRKQ9NRH2 765 aa19.55■□□□□ 0.72
CNOT3-208ENST00000613073 CEP126Q9P2H0 1117 aa19.55■□□□□ 0.72
CNOT3-208ENST00000613073 TAF5LO75529 589 aa19.55■□□□□ 0.72
CNOT3-208ENST00000613073 KIF20AO95235 890 aa19.55■□□□□ 0.72
CNOT3-208ENST00000613073 KCNB2Q92953 911 aa19.55■□□□□ 0.72
CNOT3-208ENST00000613073 ZBTB22O15209 634 aa19.54■□□□□ 0.72
CNOT3-208ENST00000613073 BRD1O95696 1058 aa19.54■□□□□ 0.72
CNOT3-208ENST00000613073 IFIT5Q13325 482 aaKnown RBP19.54■□□□□ 0.72
CNOT3-208ENST00000613073 DZIP3Q86Y13 1208 aaKnown RBP19.54■□□□□ 0.72
CNOT3-208ENST00000613073 PAG1Q9NWQ8 432 aa19.54■□□□□ 0.72
CNOT3-208ENST00000613073 GADD45BO75293 160 aaPredicted RBP19.54■□□□□ 0.72
CNOT3-208ENST00000613073 MBD3O95983 291 aa19.54■□□□□ 0.72
CNOT3-208ENST00000613073 CGNQ9P2M7 1197 aaKnown RBP19.54■□□□□ 0.72
CNOT3-208ENST00000613073 LTBP4Q8N2S1 1624 aa19.54■□□□□ 0.72
CNOT3-208ENST00000613073 ZNF609O15014 1411 aa19.54■□□□□ 0.72
CNOT3-208ENST00000613073 CIAO1O76071 339 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 VPS53Q5VIR6 699 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 MARCH10Q8NA82 808 aaPredicted RBP19.53■□□□□ 0.72
CNOT3-208ENST00000613073 GPR108Q9NPR9 543 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 TRMT112Q9UI30 125 aaKnown RBP19.53■□□□□ 0.72
CNOT3-208ENST00000613073 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.53■□□□□ 0.72
CNOT3-208ENST00000613073 PHLPP1O60346 1717 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 LETM1O95202 739 aaPredicted RBP19.53■□□□□ 0.72
CNOT3-208ENST00000613073 IFIT1P09914 478 aaKnown RBP19.53■□□□□ 0.72
CNOT3-208ENST00000613073 CCDC83Q8IWF9 413 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 KBTBD3Q8NAB2 608 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
CNOT3-208ENST00000613073 VGLL3A8MV65 326 aa19.52■□□□□ 0.72
CNOT3-208ENST00000613073 ADORA1P30542 326 aa19.52■□□□□ 0.72
CNOT3-208ENST00000613073 GREM2Q9H772 168 aa19.52■□□□□ 0.72
CNOT3-208ENST00000613073 ADCY5O95622 1261 aa19.52■□□□□ 0.72
CNOT3-208ENST00000613073 GORABQ5T7V8 394 aa19.52■□□□□ 0.72
CNOT3-208ENST00000613073 RNF20Q5VTR2 975 aa19.52■□□□□ 0.72
CNOT3-208ENST00000613073 BCL11BQ9C0K0 894 aaPredicted RBP19.52■□□□□ 0.72
CNOT3-208ENST00000613073 CSF1RP07333 972 aa19.51■□□□□ 0.71
CNOT3-208ENST00000613073 ATP6V1AP38606 617 aa19.51■□□□□ 0.71
CNOT3-208ENST00000613073 FKBP4Q02790 459 aaKnown RBP eCLIP19.51■□□□□ 0.71
CNOT3-208ENST00000613073 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
CNOT3-208ENST00000613073 MCMDC2Q4G0Z9 681 aa19.51■□□□□ 0.71
CNOT3-208ENST00000613073 IRS4O14654 1257 aaPredicted RBP19.5■□□□□ 0.71
CNOT3-208ENST00000613073 ITGA6P23229 1130 aa19.5■□□□□ 0.71
CNOT3-208ENST00000613073 HSP90AB3PQ58FF7 597 aa19.5■□□□□ 0.71
CNOT3-208ENST00000613073 ZNF771Q7L3S4 317 aaPredicted RBP19.5■□□□□ 0.71
CNOT3-208ENST00000613073 NECAB1Q8N987 351 aa19.5■□□□□ 0.71
CNOT3-208ENST00000613073 TTLL11Q8NHH1 800 aa19.5■□□□□ 0.71
CNOT3-208ENST00000613073 CDCA7Q9BWT1 371 aaPredicted RBP19.5■□□□□ 0.71
CNOT3-208ENST00000613073 PLA2G12BQ9BX93 195 aa19.5■□□□□ 0.71
CNOT3-208ENST00000613073 IL6STP40189 918 aaPredicted RBP19.49■□□□□ 0.71
CNOT3-208ENST00000613073 ME3Q16798 604 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms