RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 SCN9AQ15858 1988 aa20.35■□□□□ 0.85
LTBP4-233ENST00000612121 COL4A1P02462 1669 aa20.35■□□□□ 0.85
LTBP4-233ENST00000612121 MAPK8IP3Q9UPT6 1336 aa20.34■□□□□ 0.85
LTBP4-233ENST00000612121 VIL1P09327 827 aaKnown RBP20.34■□□□□ 0.85
LTBP4-233ENST00000612121 RASAL3Q86YV0 1011 aa20.34■□□□□ 0.85
LTBP4-233ENST00000612121 EYA3Q99504 573 aa20.34■□□□□ 0.85
LTBP4-233ENST00000612121 PNNQ9H307 717 aaKnown RBP20.34■□□□□ 0.85
LTBP4-233ENST00000612121 TBC1D16Q8TBP0 767 aa20.33■□□□□ 0.85
LTBP4-233ENST00000612121 HPS5Q9UPZ3 1129 aa20.33■□□□□ 0.85
LTBP4-233ENST00000612121 FAM89AQ96GI7 184 aa20.32■□□□□ 0.84
LTBP4-233ENST00000612121 RIPK4P57078 832 aa20.31■□□□□ 0.84
LTBP4-233ENST00000612121 ISCA1Q9BUE6 129 aa20.31■□□□□ 0.84
LTBP4-233ENST00000612121 ZNF280AP59817 542 aaPredicted RBP20.3■□□□□ 0.84
LTBP4-233ENST00000612121 PKN2Q16513 984 aaKnown RBP20.3■□□□□ 0.84
LTBP4-233ENST00000612121 ANGEL2Q5VTE6 544 aaKnown RBP20.3■□□□□ 0.84
LTBP4-233ENST00000612121 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
LTBP4-233ENST00000612121 FKBP1BP68106 108 aa20.29■□□□□ 0.84
LTBP4-233ENST00000612121 SCARF1Q14162 830 aa20.29■□□□□ 0.84
LTBP4-233ENST00000612121 PLBD2Q8NHP8 589 aa20.29■□□□□ 0.84
LTBP4-233ENST00000612121 ZC3H12CQ9C0D7 883 aaKnown RBP20.29■□□□□ 0.84
LTBP4-233ENST00000612121 PAPPA2Q9BXP8 1791 aa20.29■□□□□ 0.84
LTBP4-233ENST00000612121 ZNF609O15014 1411 aa20.28■□□□□ 0.84
LTBP4-233ENST00000612121 ATP5J2-PTCD1G3V325 749 aa20.28■□□□□ 0.84
LTBP4-233ENST00000612121 KRT24Q2M2I5 525 aa20.28■□□□□ 0.84
LTBP4-233ENST00000612121 ANKRD13DQ6ZTN6 518 aa20.28■□□□□ 0.84
LTBP4-233ENST00000612121 PODXL2Q9NZ53 605 aa20.28■□□□□ 0.84
LTBP4-233ENST00000612121 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
LTBP4-233ENST00000612121 AGBL3Q8NEM8 1001 aa20.27■□□□□ 0.84
LTBP4-233ENST00000612121 ZNF296Q8WUU4 475 aaPredicted RBP20.27■□□□□ 0.84
LTBP4-233ENST00000612121 TBC1D8O95759 1140 aa20.26■□□□□ 0.83
LTBP4-233ENST00000612121 RTL5Q5HYW3 569 aaPredicted RBP20.26■□□□□ 0.83
LTBP4-233ENST00000612121 RSBN1LQ6PCB5 846 aaPredicted RBP20.26■□□□□ 0.83
LTBP4-233ENST00000612121 MOB2Q70IA6 237 aa20.26■□□□□ 0.83
LTBP4-233ENST00000612121 HDAC9Q9UKV0 1011 aa20.26■□□□□ 0.83
LTBP4-233ENST00000612121 IRS4O14654 1257 aaPredicted RBP20.25■□□□□ 0.83
LTBP4-233ENST00000612121 TMPOP42166 694 aaKnown RBP20.25■□□□□ 0.83
LTBP4-233ENST00000612121 GMLQ99445 158 aa20.25■□□□□ 0.83
LTBP4-233ENST00000612121 PSME4Q14997 1843 aa20.25■□□□□ 0.83
LTBP4-233ENST00000612121 PITPNM2Q9BZ72 1349 aa20.25■□□□□ 0.83
LTBP4-233ENST00000612121 G3V3G9 751 aa20.24■□□□□ 0.83
LTBP4-233ENST00000612121 CHL1O00533 1208 aa20.24■□□□□ 0.83
LTBP4-233ENST00000612121 UFL1O94874 794 aa20.24■□□□□ 0.83
LTBP4-233ENST00000612121 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
LTBP4-233ENST00000612121 TRIM28Q13263 835 aaKnown RBP20.24■□□□□ 0.83
LTBP4-233ENST00000612121 DCAF8Q5TAQ9 597 aa20.24■□□□□ 0.83
LTBP4-233ENST00000612121 MYOZ2Q9NPC6 264 aa20.24■□□□□ 0.83
LTBP4-233ENST00000612121 USP17L8P0C7I0 530 aa20.23■□□□□ 0.83
LTBP4-233ENST00000612121 TM4SF4P48230 202 aa20.23■□□□□ 0.83
LTBP4-233ENST00000612121 NOM1Q5C9Z4 860 aaKnown RBP20.23■□□□□ 0.83
LTBP4-233ENST00000612121 SEC31BQ9NQW1 1179 aa20.23■□□□□ 0.83
LTBP4-233ENST00000612121 ANKIB1Q9P2G1 1089 aa20.23■□□□□ 0.83
LTBP4-233ENST00000612121 GGA1Q9UJY5 639 aa20.23■□□□□ 0.83
LTBP4-233ENST00000612121 SCAF8Q9UPN6 1271 aaKnown RBP20.23■□□□□ 0.83
LTBP4-233ENST00000612121 UBE2Q2LH0YL09 131 aa20.22■□□□□ 0.83
LTBP4-233ENST00000612121 GPR25O00155 361 aa20.22■□□□□ 0.83
LTBP4-233ENST00000612121 HDGFL1Q5TGJ6 251 aa20.22■□□□□ 0.83
LTBP4-233ENST00000612121 FBXO46Q6PJ61 603 aaPredicted RBP20.21■□□□□ 0.83
LTBP4-233ENST00000612121 DBF4Q9UBU7 674 aaPredicted RBP20.21■□□□□ 0.83
LTBP4-233ENST00000612121 HOXB7P09629 217 aa20.2■□□□□ 0.82
LTBP4-233ENST00000612121 PRAMEF18Q5VWM3 479 aa20.2■□□□□ 0.82
LTBP4-233ENST00000612121 ZBTB38Q8NAP3 1195 aaPredicted RBP20.19■□□□□ 0.82
LTBP4-233ENST00000612121 MKI67P46013 3256 aaKnown RBP20.19■□□□□ 0.82
LTBP4-233ENST00000612121 USP17L3A6NCW0 530 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 USP17L4A6NCW7 530 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 USP17L1Q7RTZ2 530 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 PODNQ7Z5L7 613 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 CFHR5Q9BXR6 569 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 HTTP42858 3142 aa20.18■□□□□ 0.82
LTBP4-233ENST00000612121 GCC1Q96CN9 775 aa20.17■□□□□ 0.82
LTBP4-233ENST00000612121 R3HDMLQ9H3Y0 253 aa20.17■□□□□ 0.82
LTBP4-233ENST00000612121 LAS1LQ9Y4W2 734 aaKnown RBP20.17■□□□□ 0.82
LTBP4-233ENST00000612121 FKTNO75072 461 aa20.16■□□□□ 0.82
LTBP4-233ENST00000612121 TTLL12Q14166 644 aaPredicted RBP20.16■□□□□ 0.82
LTBP4-233ENST00000612121 XDHP47989 1333 aa20.16■□□□□ 0.82
LTBP4-233ENST00000612121 HSP90B1P14625 803 aaKnown RBP20.15■□□□□ 0.82
LTBP4-233ENST00000612121 MKRN3Q13064 507 aaKnown RBP20.15■□□□□ 0.82
LTBP4-233ENST00000612121 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
LTBP4-233ENST00000612121 CCDC152Q4G0S7 254 aa20.15■□□□□ 0.82
LTBP4-233ENST00000612121 TRIM35Q9UPQ4 493 aa20.15■□□□□ 0.82
LTBP4-233ENST00000612121 WTIPA6NIX2 430 aaPredicted RBP20.14■□□□□ 0.81
LTBP4-233ENST00000612121 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
LTBP4-233ENST00000612121 SREBF2Q12772 1141 aa20.14■□□□□ 0.81
LTBP4-233ENST00000612121 RIC3Q7Z5B4 369 aa20.14■□□□□ 0.81
LTBP4-233ENST00000612121 WNT10BO00744 389 aa20.13■□□□□ 0.81
LTBP4-233ENST00000612121 PDE8AO60658 829 aa20.13■□□□□ 0.81
LTBP4-233ENST00000612121 PCCAP05165 728 aaPredicted RBP20.13■□□□□ 0.81
LTBP4-233ENST00000612121 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
LTBP4-233ENST00000612121 DACT2Q5SW24 774 aa20.13■□□□□ 0.81
LTBP4-233ENST00000612121 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
LTBP4-233ENST00000612121 CCDC85AQ96PX6 553 aaPredicted RBP20.13■□□□□ 0.81
LTBP4-233ENST00000612121 MXD3Q9BW11 206 aa20.13■□□□□ 0.81
LTBP4-233ENST00000612121 ZNF646O15015 1829 aaPredicted RBP20.12■□□□□ 0.81
LTBP4-233ENST00000612121 NF2P35240 595 aa20.12■□□□□ 0.81
LTBP4-233ENST00000612121 HABP4Q5JVS0 413 aaKnown RBP20.12■□□□□ 0.81
LTBP4-233ENST00000612121 ANKRD18AQ8IVF6 992 aa20.12■□□□□ 0.81
LTBP4-233ENST00000612121 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
LTBP4-233ENST00000612121 CENPFP49454 3210 aa20.12■□□□□ 0.81
LTBP4-233ENST00000612121 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms