RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 USP21Q9UK80 565 aa22.6■■□□□ 1.21
SEMA3B-210ENST00000611067 HSPA1LP34931 641 aa22.59■■□□□ 1.21
SEMA3B-210ENST00000611067 MTX1Q13505 466 aa22.59■■□□□ 1.21
SEMA3B-210ENST00000611067 CWC27Q6UX04 472 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-210ENST00000611067 TTLL7Q6ZT98 887 aa22.59■■□□□ 1.21
SEMA3B-210ENST00000611067 ACSBG1Q96GR2 724 aa22.59■■□□□ 1.21
SEMA3B-210ENST00000611067 TM6SF1Q9BZW5 370 aa22.58■■□□□ 1.21
SEMA3B-210ENST00000611067 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.58■■□□□ 1.21
SEMA3B-210ENST00000611067 PDRG1Q9NUG6 133 aa22.58■■□□□ 1.21
SEMA3B-210ENST00000611067 ZNF330Q9Y3S2 320 aaPredicted RBP22.58■■□□□ 1.21
SEMA3B-210ENST00000611067 PDIA4P13667 645 aaKnown RBP22.57■■□□□ 1.2
SEMA3B-210ENST00000611067 CPA1P15085 419 aa22.57■■□□□ 1.2
SEMA3B-210ENST00000611067 SYCP1Q15431 976 aa22.57■■□□□ 1.2
SEMA3B-210ENST00000611067 MAP3K11Q16584 847 aa22.57■■□□□ 1.2
SEMA3B-210ENST00000611067 SUCLG2Q96I99 432 aa22.57■■□□□ 1.2
SEMA3B-210ENST00000611067 FEZ1Q99689 392 aa22.57■■□□□ 1.2
SEMA3B-210ENST00000611067 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
SEMA3B-210ENST00000611067 USP42Q9H9J4 1324 aaKnown RBP22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 SPDYE4A6NLX3 237 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 PTGS1P23219 599 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 ZSWIM6Q9HCJ5 1215 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 ELP1O95163 1332 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 ATP5J2-PTCD1G3V325 749 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 U2AF2P26368 475 aaKnown RBP eCLIP22.56■■□□□ 1.21e-14■□□□□ 8.7
SEMA3B-210ENST00000611067 HSP90AB4PQ58FF6 505 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 RUFY2Q8WXA3 655 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 KCNB2Q92953 911 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 NUP62CLQ9H1M0 184 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 ZBTB3Q9H5J0 574 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 MRVI1Q9Y6F6 885 aa22.56■■□□□ 1.2
SEMA3B-210ENST00000611067 VPS37CA5D8V6 355 aaPredicted RBP22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 KRT85P78386 507 aa22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 TYRO3Q06418 890 aa22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 CYP46A1Q9Y6A2 500 aa22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 ST3GAL1Q11201 340 aa22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 TTC6Q86TZ1 520 aa22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 JAKMIP1Q96N16 626 aaKnown RBP22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 BICC1Q9H694 974 aaKnown RBP22.55■■□□□ 1.2
SEMA3B-210ENST00000611067 TTC41PQ6P2S7 1318 aa22.54■■□□□ 1.2
SEMA3B-210ENST00000611067 CCDC171Q6TFL3 1326 aa22.54■■□□□ 1.2
SEMA3B-210ENST00000611067 SLC4A9Q96Q91 983 aa22.54■■□□□ 1.2
SEMA3B-210ENST00000611067 GLRX3O76003 335 aaKnown RBP22.54■■□□□ 1.2
SEMA3B-210ENST00000611067 ADCK5Q3MIX3 580 aa22.54■■□□□ 1.2
SEMA3B-210ENST00000611067 A0A087WZG4 1122 aa22.53■■□□□ 1.2
SEMA3B-210ENST00000611067 KIF6Q6ZMV9 814 aa22.53■■□□□ 1.2
SEMA3B-210ENST00000611067 CYP19A1P11511 503 aaPredicted RBP22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 ME3Q16798 604 aa22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 LUZP1Q86V48 1076 aa22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 KAZALD1Q96I82 304 aa22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 SMTNL1A8MU46 457 aa22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 PTH1RQ03431 593 aa22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 NCBP1Q09161 790 aaKnown RBP22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 OS9Q13438 667 aaPredicted RBP22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 PRPF40BQ6NWY9 871 aaKnown RBP22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 CCDC186Q7Z3E2 898 aa22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 UBE3BQ7Z3V4 1068 aa22.52■■□□□ 1.2
SEMA3B-210ENST00000611067 TJP1Q07157 1748 aa22.51■■□□□ 1.19
SEMA3B-210ENST00000611067 LIG1P18858 919 aa22.51■■□□□ 1.19
SEMA3B-210ENST00000611067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.51■■□□□ 1.19
SEMA3B-210ENST00000611067 CWC25Q9NXE8 425 aaPredicted RBP22.51■■□□□ 1.19
SEMA3B-210ENST00000611067 LARP1BQ659C4 914 aaKnown RBP22.51■■□□□ 1.19
SEMA3B-210ENST00000611067 OGFRQ9NZT2 677 aa22.51■■□□□ 1.19
SEMA3B-210ENST00000611067 CBX8Q9HC52 389 aa22.5■■□□□ 1.19
SEMA3B-210ENST00000611067 PLA2G4DQ86XP0 818 aa22.5■■□□□ 1.19
SEMA3B-210ENST00000611067 NECTIN1Q15223 517 aa22.49■■□□□ 1.19
SEMA3B-210ENST00000611067 CAMK4Q16566 473 aa22.49■■□□□ 1.19
SEMA3B-210ENST00000611067 RBM43Q6ZSC3 357 aaKnown RBP22.49■■□□□ 1.19
SEMA3B-210ENST00000611067 CCDC191Q8NCU4 936 aa22.49■■□□□ 1.19
SEMA3B-210ENST00000611067 TNMDQ9H2S6 317 aa22.49■■□□□ 1.19
SEMA3B-210ENST00000611067 DTNBO60941 627 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 PDCP20941 246 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 ANO6Q4KMQ2 910 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 SMARCC1Q92922 1105 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 ZBTB1Q9Y2K1 713 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 AFF2P51816 1311 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 COL15A1P39059 1388 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 ZKSCAN1P17029 563 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 CDC37L1Q7L3B6 337 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 ERC1Q8IUD2 1116 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 NECAB1Q8N987 351 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 SCAND2PQ9GZW5 306 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 DDX19AQ9NUU7 478 aaKnown RBP22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 PAXBP1Q9Y5B6 917 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 PALLDQ8WX93 1383 aa22.48■■□□□ 1.19
SEMA3B-210ENST00000611067 ATP6V1AP38606 617 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 ZNF75DP51815 510 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 LRMPQ12912 555 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 ZSCAN25Q6NSZ9 544 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 DRC7Q8IY82 874 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 TDRD7Q8NHU6 1098 aaKnown RBP22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 C16orf45Q96MC5 204 aaPredicted RBP22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 DACT1Q9NYF0 836 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 TPCN1Q9ULQ1 816 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 CHMP3Q9Y3E7 222 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 TNNT1P13805 278 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 SIK1P57059 783 aa22.47■■□□□ 1.19
SEMA3B-210ENST00000611067 THSD7AQ9UPZ6 1657 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 KCNQ2O43526 872 aa22.46■■□□□ 1.19
SEMA3B-210ENST00000611067 CKAP2LQ8IYA6 745 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms