RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.49□□□□□ -1.051e-11■■□□□ 14.1
CSDE1-218ENST00000610726 GLI2P10070 1586 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 WDR17Q8IZU2 1322 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC96Q2M329 555 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 PARP10Q53GL7 1025 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 SNX21Q969T3 373 aa8.49□□□□□ -1.05
CSDE1-218ENST00000610726 SEC63Q9UGP8 760 aaKnown RBP8.49□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC171Q6TFL3 1326 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC173Q0VFZ6 552 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 PANK2Q9BZ23 570 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 RIMBP2O15034 1052 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 WTAPQ15007 396 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 CCAR1Q8IX12 1150 aaKnown RBP8.48□□□□□ -1.05
CSDE1-218ENST00000610726 CNBD1Q8NA66 436 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 EAF2Q96CJ1 260 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-218ENST00000610726 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
CSDE1-218ENST00000610726 RBM27Q9P2N5 1060 aaKnown RBP8.48□□□□□ -1.05
CSDE1-218ENST00000610726 ADGRB3O60242 1522 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 ZBTB43O43298 467 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 PRC1O43663 620 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 KCNQ4P56696 695 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 NLRP5P59047 1200 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 DHX8Q14562 1220 aaKnown RBP8.48□□□□□ -1.05
CSDE1-218ENST00000610726 FILIP1Q7Z7B0 1213 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 CEP57L1Q8IYX8 460 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 MADDQ8WXG6 1647 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 GSPT1P15170 499 aaKnown RBP8.48□□□□□ -1.05
CSDE1-218ENST00000610726 TTLL5Q6EMB2 1281 aa8.48□□□□□ -1.05
CSDE1-218ENST00000610726 EPS15P42566 896 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 APOBRQ0VD83 1088 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 DIP2CQ9Y2E4 1556 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 CDK12Q9NYV4 1490 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-218ENST00000610726 SGSM2O43147 1006 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 OFD1O75665 1012 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 ZSCAN22P10073 491 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-218ENST00000610726 RXRAP19793 462 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 ESR2Q92731 530 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 ZNF76P36508 570 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 PICALMQ13492 652 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 FILIP1LQ4L180 1135 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 FSIP1Q8NA03 581 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 KAT14Q9H8E8 782 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 ZBTB1Q9Y2K1 713 aa8.47□□□□□ -1.05
CSDE1-218ENST00000610726 R3HCC1Q9Y3T6 440 aaKnown RBP8.47□□□□□ -1.05
CSDE1-218ENST00000610726 SPATA31A3Q5VYP0 1347 aa8.46□□□□□ -1.05
CSDE1-218ENST00000610726 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.05
CSDE1-218ENST00000610726 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.05
CSDE1-218ENST00000610726 CYP27B1O15528 508 aa8.46□□□□□ -1.05
CSDE1-218ENST00000610726 MBD4O95243 580 aa8.46□□□□□ -1.05
CSDE1-218ENST00000610726 CCDC183Q5T5S1 534 aa8.46□□□□□ -1.05
CSDE1-218ENST00000610726 ABCA6Q8N139 1617 aa8.46□□□□□ -1.05
CSDE1-218ENST00000610726 LOC102724428A0A0B4J2F2 783 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 CCDC194A0A1B0GVG4 234 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 RBM25P49756 843 aaKnown RBP8.46□□□□□ -1.06
CSDE1-218ENST00000610726 NAP1L1P55209 391 aaKnown RBP8.46□□□□□ -1.06
CSDE1-218ENST00000610726 SIK1P57059 783 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 PUM3Q15397 648 aaKnown RBP8.46□□□□□ -1.06
CSDE1-218ENST00000610726 CNPY2Q9Y2B0 182 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 DHX32Q7L7V1 743 aaKnown RBP8.46□□□□□ -1.06
CSDE1-218ENST00000610726 KRT23Q9C075 422 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 MCM9Q9NXL9 1143 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 CEP131Q9UPN4 1083 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 PARP3Q9Y6F1 533 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 RIMBP3CA6NJZ7 1639 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 RIMBP3BA6NNM3 1639 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 RIMBP3Q9UFD9 1639 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 LMTK2Q8IWU2 1503 aa8.46□□□□□ -1.06
CSDE1-218ENST00000610726 KDRP35968 1356 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 KLHL10Q6JEL2 608 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 ZNF804AQ7Z570 1209 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 KBTBD3Q8NAB2 608 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 MAGEC2Q9UBF1 373 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-218ENST00000610726 BIN1O00499 593 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 ZAP70P43403 619 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 DNM1Q05193 864 aaKnown RBP8.45□□□□□ -1.06
CSDE1-218ENST00000610726 LRRC24Q50LG9 513 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 IFIT1BQ5T764 474 aaKnown RBP8.45□□□□□ -1.06
CSDE1-218ENST00000610726 RUFY3Q7L099 469 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 ZKSCAN3Q9BRR0 538 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 ALG1Q9BT22 464 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 KIF24Q5T7B8 1368 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 TSPY3P0CV98 308 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 TSPY8P0CW00 308 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 KIF5BP33176 963 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-218ENST00000610726 ANKARQ7Z5J8 1434 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 ADGRL3Q9HAR2 1447 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 RAD50Q92878 1312 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 HLA-DOAP06340 250 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 GSTO1P78417 241 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 STIM1Q13586 685 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 SIRT2Q8IXJ6 389 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 ANKRD2Q9GZV1 360 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 CNNM2Q9H8M5 875 aa8.45□□□□□ -1.06
CSDE1-218ENST00000610726 INO80Q9ULG1 1556 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-218ENST00000610726 LDHBP07195 334 aaKnown RBP8.44□□□□□ -1.06
CSDE1-218ENST00000610726 RTN1Q16799 776 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 KLHL40Q2TBA0 621 aa8.44□□□□□ -1.06
CSDE1-218ENST00000610726 SNX14Q9Y5W7 946 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms