RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 EIF5P55010 431 aaKnown RBP14.27□□□□□ -0.12
USP6NL-206ENST00000609853 CTSWP56202 376 aa14.27□□□□□ -0.12
USP6NL-206ENST00000609853 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.12
USP6NL-206ENST00000609853 ZNF34Q8IZ26 560 aa14.27□□□□□ -0.12
USP6NL-206ENST00000609853 TTLL11Q8NHH1 800 aa14.27□□□□□ -0.12
USP6NL-206ENST00000609853 SMARCC1Q92922 1105 aaPredicted RBP14.27□□□□□ -0.12
USP6NL-206ENST00000609853 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.12
USP6NL-206ENST00000609853 ZNF831Q5JPB2 1677 aa14.27□□□□□ -0.13
USP6NL-206ENST00000609853 GOLIM4O00461 696 aa14.27□□□□□ -0.13
USP6NL-206ENST00000609853 PDE8AO60658 829 aa14.27□□□□□ -0.13
USP6NL-206ENST00000609853 ZFYP08048 801 aaPredicted RBP14.27□□□□□ -0.13
USP6NL-206ENST00000609853 HMGB1P09429 215 aaKnown RBP14.27□□□□□ -0.13
USP6NL-206ENST00000609853 ZMYM1Q5SVZ6 1142 aa14.27□□□□□ -0.13
USP6NL-206ENST00000609853 GORABQ5T7V8 394 aa14.27□□□□□ -0.13
USP6NL-206ENST00000609853 PUS3Q9BZE2 481 aaKnown RBP14.27□□□□□ -0.13
USP6NL-206ENST00000609853 CCDC87Q9NVE4 849 aa14.27□□□□□ -0.13
USP6NL-206ENST00000609853 TRMT112Q9UI30 125 aaKnown RBP14.27□□□□□ -0.13
USP6NL-206ENST00000609853 IRS4O14654 1257 aaPredicted RBP14.26□□□□□ -0.13
USP6NL-206ENST00000609853 RNF113AO15541 343 aaKnown RBP14.26□□□□□ -0.13
USP6NL-206ENST00000609853 PRPF40AO75400 957 aaKnown RBP14.26□□□□□ -0.13
USP6NL-206ENST00000609853 ZNF512BQ96KM6 892 aaPredicted RBP14.26□□□□□ -0.13
USP6NL-206ENST00000609853 RIPOR2Q9Y4F9 1068 aa14.26□□□□□ -0.13
USP6NL-206ENST00000609853 STX6O43752 255 aa14.25□□□□□ -0.13
USP6NL-206ENST00000609853 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
USP6NL-206ENST00000609853 ITGA6P23229 1130 aa14.25□□□□□ -0.13
USP6NL-206ENST00000609853 GPTP24298 496 aa14.25□□□□□ -0.13
USP6NL-206ENST00000609853 PARP10Q53GL7 1025 aa14.25□□□□□ -0.13
USP6NL-206ENST00000609853 TTC39AQ5SRH9 613 aa14.25□□□□□ -0.13
USP6NL-206ENST00000609853 XAGE2Q96GT9 111 aa14.25□□□□□ -0.13
USP6NL-206ENST00000609853 GRPEL1Q9HAV7 217 aa14.25□□□□□ -0.13
USP6NL-206ENST00000609853 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 ZSCAN22P10073 491 aaPredicted RBP14.24□□□□□ -0.13
USP6NL-206ENST00000609853 PDCP20941 246 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 SIK1P57059 783 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 ZNF445P59923 1031 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 LDHAL6AQ6ZMR3 332 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 MARCH10Q8NA82 808 aaPredicted RBP14.24□□□□□ -0.13
USP6NL-206ENST00000609853 NEK1Q96PY6 1258 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 CPA1P15085 419 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 ATP2B3Q16720 1220 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 METTL24Q5JXM2 366 aa14.24□□□□□ -0.13
USP6NL-206ENST00000609853 INTS5Q6P9B9 1019 aaKnown RBP14.24□□□□□ -0.13
USP6NL-206ENST00000609853 RIC1Q4ADV7 1423 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 MYH7P12883 1935 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 RGL2O15211 777 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 NCLP19338 710 aaKnown RBP14.23□□□□□ -0.13
USP6NL-206ENST00000609853 SYT1P21579 422 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 ME3Q16798 604 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 TMEM87AQ8NBN3 555 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 CHMP4CQ96CF2 233 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 GREM2Q9H772 168 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 TBC1D2BQ9UPU7 963 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 NDUFB9Q9Y6M9 179 aa14.23□□□□□ -0.13
USP6NL-206ENST00000609853 GJB2P29033 226 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 CRKLP46109 303 aaKnown RBP14.22□□□□□ -0.13
USP6NL-206ENST00000609853 CSPP1Q1MSJ5 1256 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 CCDC83Q8IWF9 413 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 KLHL34Q8N239 644 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 TPCN1Q9ULQ1 816 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 MROH5Q6ZUA9 1318 aa14.22□□□□□ -0.13
USP6NL-206ENST00000609853 LRP5O75197 1615 aa14.21□□□□□ -0.13
USP6NL-206ENST00000609853 LARGE1O95461 756 aa14.21□□□□□ -0.13
USP6NL-206ENST00000609853 CYP21A2P08686 494 aa14.21□□□□□ -0.13
USP6NL-206ENST00000609853 TTF1Q15361 905 aaPredicted RBP14.21□□□□□ -0.13
USP6NL-206ENST00000609853 ZSCAN25Q6NSZ9 544 aa14.21□□□□□ -0.13
USP6NL-206ENST00000609853 SYAP1Q96A49 352 aaPredicted RBP14.21□□□□□ -0.13
USP6NL-206ENST00000609853 SEC62Q99442 399 aaKnown RBP14.21□□□□□ -0.13
USP6NL-206ENST00000609853 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP6NL-206ENST00000609853 CTNNA3Q9UI47 895 aa14.21□□□□□ -0.13
USP6NL-206ENST00000609853 CCDC9Q9Y3X0 531 aaKnown RBP14.21□□□□□ -0.13
USP6NL-206ENST00000609853 UBN2Q6ZU65 1347 aa14.21□□□□□ -0.13
USP6NL-206ENST00000609853 RTL9Q8NET4 1388 aa14.21□□□□□ -0.14
USP6NL-206ENST00000609853 TCHHQ07283 1943 aa14.21□□□□□ -0.14
USP6NL-206ENST00000609853 NUTM2BA6NNL0 878 aaPredicted RBP14.21□□□□□ -0.14
USP6NL-206ENST00000609853 NUTM2EB1AL46 878 aaPredicted RBP14.21□□□□□ -0.14
USP6NL-206ENST00000609853 PDE8BO95263 885 aa14.21□□□□□ -0.14
USP6NL-206ENST00000609853 F13A1P00488 732 aa14.21□□□□□ -0.14
USP6NL-206ENST00000609853 FKBP4Q02790 459 aaKnown RBP eCLIP14.21□□□□□ -0.14
USP6NL-206ENST00000609853 TOB2Q14106 344 aaPredicted RBP14.21□□□□□ -0.14
USP6NL-206ENST00000609853 NUTM2AQ8IVF1 878 aaPredicted RBP14.21□□□□□ -0.14
USP6NL-206ENST00000609853 VGLL2Q8N8G2 317 aa14.21□□□□□ -0.14
USP6NL-206ENST00000609853 UTP14AQ9BVJ6 771 aaKnown RBP14.21□□□□□ -0.14
USP6NL-206ENST00000609853 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.14
USP6NL-206ENST00000609853 COL5A3P25940 1745 aaPredicted RBP14.2□□□□□ -0.14
USP6NL-206ENST00000609853 LAMB2P55268 1798 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 AKAP11Q9UKA4 1901 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 MYH14Q7Z406 1995 aaKnown RBP14.2□□□□□ -0.14
USP6NL-206ENST00000609853 UQCRFS1P1P0C7P4 283 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 HSPD1P10809 573 aaKnown RBP14.2□□□□□ -0.14
USP6NL-206ENST00000609853 ADORA1P30542 326 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 VPS72Q15906 364 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 ZSCAN23Q3MJ62 389 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 FOXD4L5Q5VV16 416 aaPredicted RBP14.2□□□□□ -0.14
USP6NL-206ENST00000609853 CAVIN1Q6NZI2 390 aaKnown RBP14.2□□□□□ -0.14
USP6NL-206ENST00000609853 CCDC129Q6ZRS4 1044 aa14.2□□□□□ -0.14
USP6NL-206ENST00000609853 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms