RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 HSP90B1P14625 803 aaKnown RBP17.27■□□□□ 0.36
CTCFL-219ENST00000608720 PGBD1Q96JS3 809 aa17.27■□□□□ 0.36
CTCFL-219ENST00000608720 ARID3AQ99856 593 aa17.27■□□□□ 0.36
CTCFL-219ENST00000608720 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.35
CTCFL-219ENST00000608720 CYP21A2P08686 494 aa17.27■□□□□ 0.35
CTCFL-219ENST00000608720 CBX1P83916 185 aa17.27■□□□□ 0.35
CTCFL-219ENST00000608720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.27■□□□□ 0.35
CTCFL-219ENST00000608720 TICAM2Q86XR7 235 aa17.27■□□□□ 0.35
CTCFL-219ENST00000608720 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.35
CTCFL-219ENST00000608720 TTC5Q8N0Z6 440 aa17.27■□□□□ 0.35
CTCFL-219ENST00000608720 TDRD7Q8NHU6 1098 aaKnown RBP17.27■□□□□ 0.35
CTCFL-219ENST00000608720 DNAJC2Q99543 621 aaKnown RBP17.27■□□□□ 0.35
CTCFL-219ENST00000608720 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.35
CTCFL-219ENST00000608720 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
CTCFL-219ENST00000608720 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
CTCFL-219ENST00000608720 FEZ1Q99689 392 aa17.26■□□□□ 0.35
CTCFL-219ENST00000608720 DBNDD2Q9BQY9 259 aa17.26■□□□□ 0.35
CTCFL-219ENST00000608720 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
CTCFL-219ENST00000608720 NR1I2O75469 434 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 SMARCC2Q8TAQ2 1214 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 ZNF609O15014 1411 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 A0A087WZG4 1122 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 PFKFB2O60825 505 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 CCDC129Q6ZRS4 1044 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 KBTBD3Q8NAB2 608 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 ANKRD7Q92527 254 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
CTCFL-219ENST00000608720 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
CTCFL-219ENST00000608720 PTGS1P23219 599 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 ZNF75DP51815 510 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
CTCFL-219ENST00000608720 MST1RQ04912 1400 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 PLA2G4DQ86XP0 818 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 ZNF165P49910 485 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 SCRN1Q12765 414 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 NAA16Q6N069 864 aaPredicted RBP17.24■□□□□ 0.35
CTCFL-219ENST00000608720 DHX32Q7L7V1 743 aaKnown RBP17.24■□□□□ 0.35
CTCFL-219ENST00000608720 DRC7Q8IY82 874 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 PDCL2Q8N4E4 241 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 SEC62Q99442 399 aaKnown RBP17.24■□□□□ 0.35
CTCFL-219ENST00000608720 TRIM5Q9C035 493 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
CTCFL-219ENST00000608720 CCDC186Q7Z3E2 898 aa17.23■□□□□ 0.35
CTCFL-219ENST00000608720 PLBD2Q8NHP8 589 aa17.23■□□□□ 0.35
CTCFL-219ENST00000608720 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
CTCFL-219ENST00000608720 NDUFB9Q9Y6M9 179 aa17.23■□□□□ 0.35
CTCFL-219ENST00000608720 CTAGE5O15320 804 aa17.23■□□□□ 0.35
CTCFL-219ENST00000608720 CASP7P55210 303 aa17.23■□□□□ 0.35
CTCFL-219ENST00000608720 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
CTCFL-219ENST00000608720 PLEKHG2Q9H7P9 1386 aa17.22■□□□□ 0.35
CTCFL-219ENST00000608720 SYCP1Q15431 976 aa17.22■□□□□ 0.35
CTCFL-219ENST00000608720 ATL3Q6DD88 541 aa17.22■□□□□ 0.35
CTCFL-219ENST00000608720 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
CTCFL-219ENST00000608720 RCOR1Q9UKL0 485 aa17.22■□□□□ 0.35
CTCFL-219ENST00000608720 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
CTCFL-219ENST00000608720 CTIFO43310 598 aaKnown RBP17.21■□□□□ 0.35
CTCFL-219ENST00000608720 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
CTCFL-219ENST00000608720 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
CTCFL-219ENST00000608720 BBXQ8WY36 941 aaPredicted RBP17.21■□□□□ 0.35
CTCFL-219ENST00000608720 CHMP4CQ96CF2 233 aa17.21■□□□□ 0.35
CTCFL-219ENST00000608720 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
CTCFL-219ENST00000608720 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
CTCFL-219ENST00000608720 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
CTCFL-219ENST00000608720 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
CTCFL-219ENST00000608720 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
CTCFL-219ENST00000608720 CHGBP05060 677 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 CDC25BP30305 580 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 ADD1P35611 737 aaKnown RBP17.2■□□□□ 0.34
CTCFL-219ENST00000608720 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
CTCFL-219ENST00000608720 STOX1Q6ZVD7 989 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 TSC1Q92574 1164 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 H7C1W4 665 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 PIP4K2AP48426 406 aaPredicted RBP17.2■□□□□ 0.34
CTCFL-219ENST00000608720 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
CTCFL-219ENST00000608720 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 PAG1Q9NWQ8 432 aa17.2■□□□□ 0.34
CTCFL-219ENST00000608720 C5P01031 1676 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 TRPM3Q9HCF6 1732 aaPredicted RBP17.19■□□□□ 0.34
CTCFL-219ENST00000608720 RIOK3O14730 519 aaKnown RBP17.19■□□□□ 0.34
CTCFL-219ENST00000608720 GABPB1Q06547 395 aaPredicted RBP17.19■□□□□ 0.34
CTCFL-219ENST00000608720 PDE4CQ08493 712 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 ZSCAN25Q6NSZ9 544 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 GOLIM4O00461 696 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 CSB-PGBD3P0DP91 1061 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 CABP4P57796 275 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 FOXO4P98177 505 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 ZMYM1Q5SVZ6 1142 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 SARM1Q6SZW1 724 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
CTCFL-219ENST00000608720 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
CTCFL-219ENST00000608720 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 OGFRQ9NZT2 677 aa17.19■□□□□ 0.34
CTCFL-219ENST00000608720 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
CTCFL-219ENST00000608720 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
CTCFL-219ENST00000608720 CTDNEP1O95476 244 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms