RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 GPC2Q8N158 579 aa17.95■□□□□ 0.46
HDDC2-206ENST00000608461 TBC1D16Q8TBP0 767 aa17.95■□□□□ 0.46
HDDC2-206ENST00000608461 SUCLG2Q96I99 432 aa17.95■□□□□ 0.46
HDDC2-206ENST00000608461 L3MBTL3Q96JM7 780 aaPredicted RBP17.95■□□□□ 0.46
HDDC2-206ENST00000608461 POLLQ9UGP5 575 aa17.95■□□□□ 0.46
HDDC2-206ENST00000608461 GGA1Q9UJY5 639 aa17.95■□□□□ 0.46
HDDC2-206ENST00000608461 ZNRF3Q9ULT6 936 aa17.95■□□□□ 0.46
HDDC2-206ENST00000608461 ATP2B4P23634 1241 aa17.94■□□□□ 0.46
HDDC2-206ENST00000608461 SLC51AQ86UW1 340 aa17.94■□□□□ 0.46
HDDC2-206ENST00000608461 FRAT1Q92837 279 aaPredicted RBP17.94■□□□□ 0.46
HDDC2-206ENST00000608461 KAZALD1Q96I82 304 aa17.94■□□□□ 0.46
HDDC2-206ENST00000608461 ZC3H12CQ9C0D7 883 aaKnown RBP17.94■□□□□ 0.46
HDDC2-206ENST00000608461 NMRK2Q9NPI5 230 aa17.94■□□□□ 0.46
HDDC2-206ENST00000608461 CHMP3Q9Y3E7 222 aa17.94■□□□□ 0.46
HDDC2-206ENST00000608461 IQCA1LA6NCM1 817 aa17.93■□□□□ 0.46
HDDC2-206ENST00000608461 TOMM70O94826 608 aa17.93■□□□□ 0.46
HDDC2-206ENST00000608461 UBTFL1P0CB47 393 aaPredicted RBP17.93■□□□□ 0.46
HDDC2-206ENST00000608461 BICC1Q9H694 974 aaKnown RBP17.93■□□□□ 0.46
HDDC2-206ENST00000608461 RRAGCQ9HB90 399 aa17.93■□□□□ 0.46
HDDC2-206ENST00000608461 LEMD3Q9Y2U8 911 aa17.93■□□□□ 0.46
HDDC2-206ENST00000608461 DDNO94850 711 aaPredicted RBP17.92■□□□□ 0.46
HDDC2-206ENST00000608461 UFL1O94874 794 aa17.92■□□□□ 0.46
HDDC2-206ENST00000608461 GNAI3P08754 354 aa17.92■□□□□ 0.46
HDDC2-206ENST00000608461 TAF7LQ5H9L4 462 aa17.92■□□□□ 0.46
HDDC2-206ENST00000608461 C16orf71Q8IYS4 520 aaPredicted RBP17.92■□□□□ 0.46
HDDC2-206ENST00000608461 SCN4AP35499 1836 aa17.92■□□□□ 0.46
HDDC2-206ENST00000608461 COL4A5P29400 1685 aa17.92■□□□□ 0.46
HDDC2-206ENST00000608461 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
HDDC2-206ENST00000608461 MS4A1P11836 297 aa17.91■□□□□ 0.46
HDDC2-206ENST00000608461 TNIP1Q15025 636 aa17.91■□□□□ 0.46
HDDC2-206ENST00000608461 LDHAL6AQ6ZMR3 332 aa17.91■□□□□ 0.46
HDDC2-206ENST00000608461 ZNF541Q9H0D2 1346 aa17.91■□□□□ 0.46
HDDC2-206ENST00000608461 C1QTNF8P60827 252 aa17.9■□□□□ 0.46
HDDC2-206ENST00000608461 ANKRD44Q8N8A2 993 aa17.9■□□□□ 0.46
HDDC2-206ENST00000608461 POTECB2RU33 542 aa17.89■□□□□ 0.45
HDDC2-206ENST00000608461 CHRNDQ07001 517 aa17.89■□□□□ 0.45
HDDC2-206ENST00000608461 RBM46Q8TBY0 533 aaKnown RBP17.89■□□□□ 0.45
HDDC2-206ENST00000608461 MED23Q9ULK4 1368 aa17.89■□□□□ 0.45
HDDC2-206ENST00000608461 G3V3G9 751 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 CXCL9Q07325 125 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 DCAF8Q5TAQ9 597 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 CIAPIN1Q6FI81 312 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 PODNQ7Z5L7 613 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
HDDC2-206ENST00000608461 DZIP1LQ8IYY4 767 aaKnown RBP17.88■□□□□ 0.45
HDDC2-206ENST00000608461 CNNM1Q9NRU3 951 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 FBXO3Q9UK99 471 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 ZNF804BA4D1E1 1349 aa17.88■□□□□ 0.45
HDDC2-206ENST00000608461 RIMBP2O15034 1052 aa17.87■□□□□ 0.45
HDDC2-206ENST00000608461 HACL1Q9UJ83 578 aa17.87■□□□□ 0.45
HDDC2-206ENST00000608461 RCAN3Q9UKA8 241 aa17.87■□□□□ 0.45
HDDC2-206ENST00000608461 MROH5Q6ZUA9 1318 aa17.87■□□□□ 0.45
HDDC2-206ENST00000608461 ECE2O60344 883 aa17.86■□□□□ 0.45
HDDC2-206ENST00000608461 LMOD1P29536 600 aaPredicted RBP17.86■□□□□ 0.45
HDDC2-206ENST00000608461 FSTL1Q12841 308 aa17.86■□□□□ 0.45
HDDC2-206ENST00000608461 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
HDDC2-206ENST00000608461 PNMA8AQ86V59 439 aaPredicted RBP17.86■□□□□ 0.45
HDDC2-206ENST00000608461 CLUAP1Q96AJ1 413 aa17.86■□□□□ 0.45
HDDC2-206ENST00000608461 MEIS3Q99687 375 aa17.86■□□□□ 0.45
HDDC2-206ENST00000608461 GJA3Q9Y6H8 435 aa17.86■□□□□ 0.45
HDDC2-206ENST00000608461 YDJCA8MPS7 323 aa17.85■□□□□ 0.45
HDDC2-206ENST00000608461 KCNJ4P48050 445 aa17.85■□□□□ 0.45
HDDC2-206ENST00000608461 TMEM57Q8N5G2 664 aa17.85■□□□□ 0.45
HDDC2-206ENST00000608461 ZNF594Q96JF6 807 aaPredicted RBP17.85■□□□□ 0.45
HDDC2-206ENST00000608461 COA1Q9GZY4 146 aa17.85■□□□□ 0.45
HDDC2-206ENST00000608461 DBNDD1Q9H9R9 158 aa17.85■□□□□ 0.45
HDDC2-206ENST00000608461 RIPOR2Q9Y4F9 1068 aa17.85■□□□□ 0.45
HDDC2-206ENST00000608461 GNAI2P04899 355 aa17.84■□□□□ 0.45
HDDC2-206ENST00000608461 RPS12P25398 132 aaKnown RBP17.84■□□□□ 0.45
HDDC2-206ENST00000608461 MTX1Q13505 466 aa17.84■□□□□ 0.45
HDDC2-206ENST00000608461 UBE4AQ14139 1066 aa17.84■□□□□ 0.45
HDDC2-206ENST00000608461 SMC1BQ8NDV3 1235 aa17.84■□□□□ 0.45
HDDC2-206ENST00000608461 DPF2Q92785 391 aa17.84■□□□□ 0.45
HDDC2-206ENST00000608461 TAF1DQ9H5J8 278 aaPredicted RBP17.84■□□□□ 0.45
HDDC2-206ENST00000608461 LRRFIP2Q9Y608 721 aaKnown RBP17.84■□□□□ 0.45
HDDC2-206ENST00000608461 RAD17O75943 681 aa17.83■□□□□ 0.44
HDDC2-206ENST00000608461 DOK7Q18PE1 504 aa17.83■□□□□ 0.44
HDDC2-206ENST00000608461 A0A1B0GUL6 1792 aa17.83■□□□□ 0.44
HDDC2-206ENST00000608461 ZNF609O15014 1411 aa17.82■□□□□ 0.44
HDDC2-206ENST00000608461 VIL1P09327 827 aaKnown RBP17.82■□□□□ 0.44
HDDC2-206ENST00000608461 EPHX2P34913 555 aa17.82■□□□□ 0.44
HDDC2-206ENST00000608461 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
HDDC2-206ENST00000608461 SCNN1DP51172 638 aa17.82■□□□□ 0.44
HDDC2-206ENST00000608461 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.82■□□□□ 0.44
HDDC2-206ENST00000608461 GPR101Q96P66 508 aaPredicted RBP17.82■□□□□ 0.44
HDDC2-206ENST00000608461 GPRC5DQ9NZD1 345 aa17.82■□□□□ 0.44
HDDC2-206ENST00000608461 TNNQ9UQP3 1299 aa17.82■□□□□ 0.44
HDDC2-206ENST00000608461 TAF5LO75529 589 aa17.81■□□□□ 0.44
HDDC2-206ENST00000608461 CIAO1O76071 339 aa17.81■□□□□ 0.44
HDDC2-206ENST00000608461 MMP14P50281 582 aa17.81■□□□□ 0.44
HDDC2-206ENST00000608461 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
HDDC2-206ENST00000608461 USP50Q70EL3 339 aaPredicted RBP17.81■□□□□ 0.44
HDDC2-206ENST00000608461 LDHDQ86WU2 507 aa17.81■□□□□ 0.44
HDDC2-206ENST00000608461 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
HDDC2-206ENST00000608461 PSME4Q14997 1843 aa17.81■□□□□ 0.44
HDDC2-206ENST00000608461 USP17L3A6NCW0 530 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 USP17L4A6NCW7 530 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 EYA2O00167 538 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 PSMD14O00487 310 aa17.8■□□□□ 0.44
HDDC2-206ENST00000608461 PDE8BO95263 885 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms