RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
TUBE1-208ENST00000604743 HACL1Q9UJ83 578 aa18.21■□□□□ 0.51
TUBE1-208ENST00000604743 GGA1Q9UJY5 639 aa18.21■□□□□ 0.51
TUBE1-208ENST00000604743 ANKRD18BA2A2Z9 1011 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 RAD17O75943 681 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 NBPF7P0C2Y1 421 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-208ENST00000604743 HSPA6P17066 643 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 RARSP54136 660 aaKnown RBP18.2■□□□□ 0.5
TUBE1-208ENST00000604743 DOK7Q18PE1 504 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 EAPPQ56P03 285 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-208ENST00000604743 SMC1BQ8NDV3 1235 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 SUCLG2Q96I99 432 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 ZC3H12CQ9C0D7 883 aaKnown RBP18.2■□□□□ 0.5
TUBE1-208ENST00000604743 TAF1DQ9H5J8 278 aaPredicted RBP18.2■□□□□ 0.5
TUBE1-208ENST00000604743 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 MINPP1Q9UNW1 487 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 XDHP47989 1333 aa18.2■□□□□ 0.5
TUBE1-208ENST00000604743 G3V3G9 751 aa18.19■□□□□ 0.5
TUBE1-208ENST00000604743 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
TUBE1-208ENST00000604743 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
TUBE1-208ENST00000604743 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
TUBE1-208ENST00000604743 FSTL1Q12841 308 aa18.19■□□□□ 0.5
TUBE1-208ENST00000604743 IFIT5Q13325 482 aaKnown RBP18.19■□□□□ 0.5
TUBE1-208ENST00000604743 DCAF8Q5TAQ9 597 aa18.19■□□□□ 0.5
TUBE1-208ENST00000604743 CIAPIN1Q6FI81 312 aa18.19■□□□□ 0.5
TUBE1-208ENST00000604743 YDJCA8MPS7 323 aa18.18■□□□□ 0.5
TUBE1-208ENST00000604743 ATP2B4P23634 1241 aa18.18■□□□□ 0.5
TUBE1-208ENST00000604743 EPHX2P34913 555 aa18.18■□□□□ 0.5
TUBE1-208ENST00000604743 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
TUBE1-208ENST00000604743 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
TUBE1-208ENST00000604743 WTIPA6NIX2 430 aaPredicted RBP18.17■□□□□ 0.5
TUBE1-208ENST00000604743 ECE2O60344 883 aa18.17■□□□□ 0.5
TUBE1-208ENST00000604743 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
TUBE1-208ENST00000604743 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
TUBE1-208ENST00000604743 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
TUBE1-208ENST00000604743 EPS15P42566 896 aa18.16■□□□□ 0.5
TUBE1-208ENST00000604743 SCNN1DP51172 638 aa18.16■□□□□ 0.5
TUBE1-208ENST00000604743 TNIP1Q15025 636 aa18.16■□□□□ 0.5
TUBE1-208ENST00000604743 ZBED9Q6R2W3 1325 aa18.16■□□□□ 0.5
TUBE1-208ENST00000604743 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
TUBE1-208ENST00000604743 BCAR3O75815 825 aa18.15■□□□□ 0.5
TUBE1-208ENST00000604743 GMPSP49915 693 aaPredicted RBP18.15■□□□□ 0.5
TUBE1-208ENST00000604743 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
TUBE1-208ENST00000604743 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
TUBE1-208ENST00000604743 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
TUBE1-208ENST00000604743 FRAT1Q92837 279 aaPredicted RBP18.15■□□□□ 0.5
TUBE1-208ENST00000604743 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
TUBE1-208ENST00000604743 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
TUBE1-208ENST00000604743 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
TUBE1-208ENST00000604743 KCNQ5Q9NR82 932 aa18.15■□□□□ 0.5
TUBE1-208ENST00000604743 UTYO14607 1347 aa18.15■□□□□ 0.5
TUBE1-208ENST00000604743 PSMD14O00487 310 aa18.14■□□□□ 0.49
TUBE1-208ENST00000604743 CHRNDQ07001 517 aa18.14■□□□□ 0.49
TUBE1-208ENST00000604743 LDHDQ86WU2 507 aa18.14■□□□□ 0.49
TUBE1-208ENST00000604743 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
TUBE1-208ENST00000604743 ANKRD2Q9GZV1 360 aa18.14■□□□□ 0.49
TUBE1-208ENST00000604743 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
TUBE1-208ENST00000604743 TAF5LO75529 589 aa18.13■□□□□ 0.49
TUBE1-208ENST00000604743 KCNJ4P48050 445 aa18.13■□□□□ 0.49
TUBE1-208ENST00000604743 APLP1P51693 650 aa18.13■□□□□ 0.49
TUBE1-208ENST00000604743 PNMA8AQ86V59 439 aaPredicted RBP18.13■□□□□ 0.49
TUBE1-208ENST00000604743 CNNM1Q9NRU3 951 aa18.13■□□□□ 0.49
TUBE1-208ENST00000604743 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
TUBE1-208ENST00000604743 A0A1B0GUL6 1792 aa18.12■□□□□ 0.49
TUBE1-208ENST00000604743 PLIN1O60240 522 aa18.12■□□□□ 0.49
TUBE1-208ENST00000604743 HTRA3P83110 453 aa18.12■□□□□ 0.49
TUBE1-208ENST00000604743 LDHAL6AQ6ZMR3 332 aa18.12■□□□□ 0.49
TUBE1-208ENST00000604743 GPRC5DQ9NZD1 345 aa18.12■□□□□ 0.49
TUBE1-208ENST00000604743 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
TUBE1-208ENST00000604743 ZNF804BA4D1E1 1349 aa18.12■□□□□ 0.49
TUBE1-208ENST00000604743 SNAP23O00161 211 aa18.11■□□□□ 0.49
TUBE1-208ENST00000604743 IPO8O15397 1037 aaKnown RBP18.11■□□□□ 0.49
TUBE1-208ENST00000604743 ANKRD44Q8N8A2 993 aa18.11■□□□□ 0.49
TUBE1-208ENST00000604743 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
TUBE1-208ENST00000604743 MED23Q9ULK4 1368 aa18.1■□□□□ 0.49
TUBE1-208ENST00000604743 SHTN1A0MZ66 631 aa18.1■□□□□ 0.49
TUBE1-208ENST00000604743 KLRK1P26718 216 aa18.1■□□□□ 0.49
TUBE1-208ENST00000604743 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
TUBE1-208ENST00000604743 TXNRD3Q86VQ6 643 aa18.1■□□□□ 0.49
TUBE1-208ENST00000604743 ARHGAP45Q92619 1136 aa18.1■□□□□ 0.49
TUBE1-208ENST00000604743 CLUAP1Q96AJ1 413 aa18.1■□□□□ 0.49
TUBE1-208ENST00000604743 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
TUBE1-208ENST00000604743 ADARB2Q9NS39 739 aaKnown RBP18.1■□□□□ 0.49
TUBE1-208ENST00000604743 CNOT7Q9UIV1 285 aaKnown RBP18.1■□□□□ 0.49
TUBE1-208ENST00000604743 CEP350Q5VT06 3117 aa18.1■□□□□ 0.49
TUBE1-208ENST00000604743 PSME4Q14997 1843 aa18.09■□□□□ 0.49
TUBE1-208ENST00000604743 ADAMTSL1Q8N6G6 1762 aa18.09■□□□□ 0.49
TUBE1-208ENST00000604743 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
TUBE1-208ENST00000604743 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
TUBE1-208ENST00000604743 FBXW7Q969H0 707 aa18.09■□□□□ 0.49
TUBE1-208ENST00000604743 H7C1D1 291 aa18.08■□□□□ 0.48
TUBE1-208ENST00000604743 TRIM27P14373 513 aa18.08■□□□□ 0.48
TUBE1-208ENST00000604743 USP50Q70EL3 339 aaPredicted RBP18.08■□□□□ 0.48
TUBE1-208ENST00000604743 MICALL2Q8IY33 904 aa18.08■□□□□ 0.48
TUBE1-208ENST00000604743 VIL1P09327 827 aaKnown RBP18.07■□□□□ 0.48
TUBE1-208ENST00000604743 ATF7IPQ6VMQ6 1270 aa18.07■□□□□ 0.48
TUBE1-208ENST00000604743 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
TUBE1-208ENST00000604743 CNTROBQ8N137 903 aa18.07■□□□□ 0.48
TUBE1-208ENST00000604743 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
TUBE1-208ENST00000604743 RBM26Q5T8P6 1007 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms