RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PDE8AO60658 829 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 HSPA8P11142 646 aaKnown RBP16.96■□□□□ 0.31
RPS28-204ENST00000602140 CCDC152Q4G0S7 254 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 CDC37L1Q7L3B6 337 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 SAMD7Q7Z3H4 446 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 SAPCD2Q86UD0 394 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 TSR2Q969E8 191 aaKnown RBP16.96■□□□□ 0.31
RPS28-204ENST00000602140 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
RPS28-204ENST00000602140 ZC3H12CQ9C0D7 883 aaKnown RBP16.96■□□□□ 0.31
RPS28-204ENST00000602140 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 PODXL2Q9NZ53 605 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
RPS28-204ENST00000602140 ANKIB1Q9P2G1 1089 aa16.95■□□□□ 0.3
RPS28-204ENST00000602140 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
RPS28-204ENST00000602140 UFL1O94874 794 aa16.94■□□□□ 0.3
RPS28-204ENST00000602140 RPS12P25398 132 aaKnown RBP16.94■□□□□ 0.3
RPS28-204ENST00000602140 TBC1D10BQ4KMP7 808 aaPredicted RBP16.94■□□□□ 0.3
RPS28-204ENST00000602140 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
RPS28-204ENST00000602140 GGA1Q9UJY5 639 aa16.94■□□□□ 0.3
RPS28-204ENST00000602140 THSD7BQ9C0I4 1608 aa16.94■□□□□ 0.3
RPS28-204ENST00000602140 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 G3V3G9 751 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 AOC2O75106 756 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 EGFRP00533 1210 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 RBM26Q5T8P6 1007 aaKnown RBP16.93■□□□□ 0.3
RPS28-204ENST00000602140 DCAF8Q5TAQ9 597 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 BEGAINQ9BUH8 593 aa16.93■□□□□ 0.3
RPS28-204ENST00000602140 IGKV5-2P06315 115 aa16.92■□□□□ 0.3
RPS28-204ENST00000602140 CCDC27Q2M243 656 aa16.92■□□□□ 0.3
RPS28-204ENST00000602140 DLK2Q6UY11 383 aa16.92■□□□□ 0.3
RPS28-204ENST00000602140 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
RPS28-204ENST00000602140 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
RPS28-204ENST00000602140 HHIPL1Q96JK4 782 aa16.92■□□□□ 0.3
RPS28-204ENST00000602140 STK31Q9BXU1 1019 aa16.92■□□□□ 0.3
RPS28-204ENST00000602140 VIL1P09327 827 aaKnown RBP16.91■□□□□ 0.3
RPS28-204ENST00000602140 MAP2K2P36507 400 aa16.91■□□□□ 0.3
RPS28-204ENST00000602140 NEXNQ0ZGT2 675 aa16.91■□□□□ 0.3
RPS28-204ENST00000602140 TWISTNBQ3B726 338 aaPredicted RBP16.91■□□□□ 0.3
RPS28-204ENST00000602140 CTSWP56202 376 aa16.9■□□□□ 0.3
RPS28-204ENST00000602140 CWF19L2Q2TBE0 894 aaKnown RBP16.9■□□□□ 0.3
RPS28-204ENST00000602140 G2E3Q7L622 706 aa16.9■□□□□ 0.3
RPS28-204ENST00000602140 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
RPS28-204ENST00000602140 XDHP47989 1333 aa16.9■□□□□ 0.3
RPS28-204ENST00000602140 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
RPS28-204ENST00000602140 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
RPS28-204ENST00000602140 DCPSQ96C86 337 aaKnown RBP16.89■□□□□ 0.29
RPS28-204ENST00000602140 CDC5LQ99459 802 aaKnown RBP16.89■□□□□ 0.29
RPS28-204ENST00000602140 TSKSQ9UJT2 592 aa16.89■□□□□ 0.29
RPS28-204ENST00000602140 SCN9AQ15858 1988 aa16.88■□□□□ 0.29
RPS28-204ENST00000602140 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
RPS28-204ENST00000602140 ADM5C9JUS6 153 aa16.88■□□□□ 0.29
RPS28-204ENST00000602140 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
RPS28-204ENST00000602140 ATP2B4P23634 1241 aa16.88■□□□□ 0.29
RPS28-204ENST00000602140 HUNKP57058 714 aa16.88■□□□□ 0.29
RPS28-204ENST00000602140 GREM2Q9H772 168 aa16.88■□□□□ 0.29
RPS28-204ENST00000602140 RSBN1LQ6PCB5 846 aaPredicted RBP16.87■□□□□ 0.29
RPS28-204ENST00000602140 IL16Q14005 1332 aa16.87■□□□□ 0.29
RPS28-204ENST00000602140 WTIPA6NIX2 430 aaPredicted RBP16.86■□□□□ 0.29
RPS28-204ENST00000602140 H7C1W4 665 aa16.86■□□□□ 0.29
RPS28-204ENST00000602140 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
RPS28-204ENST00000602140 UBE3BQ7Z3V4 1068 aa16.86■□□□□ 0.29
RPS28-204ENST00000602140 AGBL3Q8NEM8 1001 aa16.86■□□□□ 0.29
RPS28-204ENST00000602140 MRS2Q9HD23 443 aa16.86■□□□□ 0.29
RPS28-204ENST00000602140 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
RPS28-204ENST00000602140 GGA3Q9NZ52 723 aa16.86■□□□□ 0.29
RPS28-204ENST00000602140 MINPP1Q9UNW1 487 aa16.86■□□□□ 0.29
RPS28-204ENST00000602140 ZNF280AP59817 542 aaPredicted RBP16.85■□□□□ 0.29
RPS28-204ENST00000602140 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
RPS28-204ENST00000602140 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
RPS28-204ENST00000602140 SULF1Q8IWU6 871 aa16.85■□□□□ 0.29
RPS28-204ENST00000602140 C2orf69Q8N8R5 385 aa16.85■□□□□ 0.29
RPS28-204ENST00000602140 GBA2Q9HCG7 927 aaPredicted RBP16.85■□□□□ 0.29
RPS28-204ENST00000602140 SALL2Q9Y467 1007 aaPredicted RBP16.85■□□□□ 0.29
RPS28-204ENST00000602140 ASTN2O75129 1339 aaPredicted RBP16.85■□□□□ 0.29
RPS28-204ENST00000602140 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 CA12O43570 354 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 FLIIQ13045 1269 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 NOGQ13253 232 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 ABHD8Q96I13 439 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 ZIC5Q96T25 663 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 FANCIQ9NVI1 1328 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 ZNF609O15014 1411 aa16.84■□□□□ 0.29
RPS28-204ENST00000602140 USP17L8P0C7I0 530 aa16.83■□□□□ 0.28
RPS28-204ENST00000602140 POLR2AP24928 1970 aaKnown RBP16.83■□□□□ 0.28
RPS28-204ENST00000602140 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
RPS28-204ENST00000602140 FKBP5Q13451 457 aaPredicted RBP16.83■□□□□ 0.28
RPS28-204ENST00000602140 SCARF1Q14162 830 aa16.83■□□□□ 0.28
RPS28-204ENST00000602140 GCKRQ14397 625 aa16.83■□□□□ 0.28
RPS28-204ENST00000602140 ANGEL2Q5VTE6 544 aaKnown RBP16.83■□□□□ 0.28
RPS28-204ENST00000602140 RGMBQ6NW40 437 aa16.83■□□□□ 0.28
RPS28-204ENST00000602140 GMLQ99445 158 aa16.83■□□□□ 0.28
RPS28-204ENST00000602140 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
RPS28-204ENST00000602140 MYH3P11055 1940 aa16.82■□□□□ 0.28
RPS28-204ENST00000602140 ANP32CO43423 234 aa16.82■□□□□ 0.28
RPS28-204ENST00000602140 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
RPS28-204ENST00000602140 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms