RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	HIRA	P54198	1017 aa	Predicted RBP	27.66	■■■□□ 2.02
FARP1-231	ENST00000600648	MICALL2	Q8IY33	904 aa		27.66	■■■□□ 2.02
FARP1-231	ENST00000600648	TNS4	Q8IZW8	715 aa		27.66	■■■□□ 2.02
FARP1-231	ENST00000600648	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.66	■■■□□ 2.02
FARP1-231	ENST00000600648		H7C1D1	291 aa		27.65	■■■□□ 2.02
FARP1-231	ENST00000600648	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	27.65	■■■□□ 2.02
FARP1-231	ENST00000600648	ANKRD18A	Q8IVF6	992 aa		27.65	■■■□□ 2.02
FARP1-231	ENST00000600648	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.65	■■■□□ 2.02
FARP1-231	ENST00000600648	GGA1	Q9UJY5	639 aa		27.65	■■■□□ 2.02
FARP1-231	ENST00000600648	NEURL1B	A8MQ27	555 aa		27.64	■■■□□ 2.02
FARP1-231	ENST00000600648	CTSW	P56202	376 aa		27.64	■■■□□ 2.02
FARP1-231	ENST00000600648	CST9	Q5W186	159 aa		27.64	■■■□□ 2.02
FARP1-231	ENST00000600648	PODXL2	Q9NZ53	605 aa		27.64	■■■□□ 2.02
FARP1-231	ENST00000600648		G3V3G9	751 aa		27.63	■■■□□ 2.01
FARP1-231	ENST00000600648	FOXN1	O15353	648 aa		27.63	■■■□□ 2.01
FARP1-231	ENST00000600648	GRM1	Q13255	1194 aa		27.63	■■■□□ 2.01
FARP1-231	ENST00000600648	NCBP3	Q53F19	620 aa	Known RBP	27.63	■■■□□ 2.01
FARP1-231	ENST00000600648	DCAF8	Q5TAQ9	597 aa		27.63	■■■□□ 2.01
FARP1-231	ENST00000600648	RTL9	Q8NET4	1388 aa		27.62	■■■□□ 2.01
FARP1-231	ENST00000600648	FLII	Q13045	1269 aa		27.62	■■■□□ 2.01
FARP1-231	ENST00000600648	SAMD7	Q7Z3H4	446 aa		27.62	■■■□□ 2.01
FARP1-231	ENST00000600648	UBE3B	Q7Z3V4	1068 aa		27.62	■■■□□ 2.01
FARP1-231	ENST00000600648	FAM9B	Q8IZU0	186 aa		27.62	■■■□□ 2.01
FARP1-231	ENST00000600648	WDR33	Q9C0J8	1336 aa	Known RBP	27.62	■■■□□ 2.01
FARP1-231	ENST00000600648	EXOSC9	Q06265	439 aa	Known RBP	27.61	■■■□□ 2.01
FARP1-231	ENST00000600648	FKBP5	Q13451	457 aa	Predicted RBP	27.61	■■■□□ 2.01
FARP1-231	ENST00000600648	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.61	■■■□□ 2.01
FARP1-231	ENST00000600648	WDR63	Q8IWG1	891 aa		27.61	■■■□□ 2.01
FARP1-231	ENST00000600648	TTLL11	Q8NHH1	800 aa		27.61	■■■□□ 2.01
FARP1-231	ENST00000600648	AIDA	Q96BJ3	306 aa		27.61	■■■□□ 2.01
FARP1-231	ENST00000600648	GREM2	Q9H772	168 aa		27.61	■■■□□ 2.01
FARP1-231	ENST00000600648	CAPN15	O75808	1086 aa		27.6	■■■□□ 2.01
FARP1-231	ENST00000600648	CELF2	O95319	508 aa	Known RBP	27.6	■■■□□ 2.01
FARP1-231	ENST00000600648	RBM26	Q5T8P6	1007 aa	Known RBP	27.6	■■■□□ 2.01
FARP1-231	ENST00000600648	DPF2	Q92785	391 aa		27.6	■■■□□ 2.01
FARP1-231	ENST00000600648	ZNF408	Q9H9D4	720 aa		27.6	■■■□□ 2.01
FARP1-231	ENST00000600648	PGAP2	Q9UHJ9	254 aa		27.6	■■■□□ 2.01
FARP1-231	ENST00000600648	VAMP4	O75379	141 aa		27.59	■■■□□ 2.01
FARP1-231	ENST00000600648	ZC3H15	Q8WU90	426 aa	Known RBP	27.59	■■■□□ 2.01
FARP1-231	ENST00000600648	CDC5L	Q99459	802 aa	Known RBP	27.59	■■■□□ 2.01
FARP1-231	ENST00000600648	EGFR	P00533	1210 aa		27.58	■■■□□ 2.01
FARP1-231	ENST00000600648	CYP4F22	Q6NT55	531 aa		27.58	■■■□□ 2.01
FARP1-231	ENST00000600648	CAPNS2	Q96L46	248 aa		27.58	■■■□□ 2.01
FARP1-231	ENST00000600648	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.58	■■■□□ 2.01
FARP1-231	ENST00000600648	XDH	P47989	1333 aa		27.58	■■■□□ 2.01
FARP1-231	ENST00000600648		H7C1W4	665 aa		27.57	■■■□□ 2
FARP1-231	ENST00000600648	DNAAF4	Q8WXU2	420 aa		27.57	■■■□□ 2
FARP1-231	ENST00000600648	WBP1L	Q9NX94	342 aa		27.57	■■■□□ 2
FARP1-231	ENST00000600648	TLL2	Q9Y6L7	1015 aa		27.57	■■■□□ 2
FARP1-231	ENST00000600648	TRPM7	Q96QT4	1865 aa		27.57	■■■□□ 2
FARP1-231	ENST00000600648	WTIP	A6NIX2	430 aa	Predicted RBP	27.56	■■■□□ 2
FARP1-231	ENST00000600648	RPS12	P25398	132 aa	Known RBP	27.56	■■■□□ 2
FARP1-231	ENST00000600648	GCKR	Q14397	625 aa		27.56	■■■□□ 2
FARP1-231	ENST00000600648	DLK2	Q6UY11	383 aa		27.56	■■■□□ 2
FARP1-231	ENST00000600648	CDC37L1	Q7L3B6	337 aa		27.56	■■■□□ 2
FARP1-231	ENST00000600648	USP48	Q86UV5	1035 aa		27.56	■■■□□ 2
FARP1-231	ENST00000600648	VIL1	P09327	827 aa	Known RBP	27.54	■■■□□ 2
FARP1-231	ENST00000600648	ATP2B4	P23634	1241 aa		27.54	■■■□□ 2
FARP1-231	ENST00000600648	CTCF	P49711	727 aa	Predicted RBP	27.54	■■■□□ 2
FARP1-231	ENST00000600648	SCN9A	Q15858	1988 aa		27.54	■■■□□ 2
FARP1-231	ENST00000600648	MINPP1	Q9UNW1	487 aa		27.54	■■■□□ 2
FARP1-231	ENST00000600648	ECE1	P42892	770 aa		27.53	■■■□□ 2
FARP1-231	ENST00000600648	MYH16	Q9H6N6	1097 aa		27.53	■■■□□ 2
FARP1-231	ENST00000600648	BSDC1	Q9NW68	430 aa	Predicted RBP	27.53	■■■□□ 2
FARP1-231	ENST00000600648		F6X3S4	739 aa		27.52	■■■□□ 2
FARP1-231	ENST00000600648	SAPCD2	Q86UD0	394 aa		27.52	■■■□□ 2
FARP1-231	ENST00000600648	LINS1	Q8NG48	757 aa		27.52	■■■□□ 2
FARP1-231	ENST00000600648	MAP2K1	Q02750	393 aa	Predicted RBP	27.51	■■□□□ 1.99
FARP1-231	ENST00000600648	KIF4B	Q2VIQ3	1234 aa		27.51	■■□□□ 1.99
FARP1-231	ENST00000600648	FAM161A	Q3B820	660 aa		27.51	■■□□□ 1.99
FARP1-231	ENST00000600648	KRT26	Q7Z3Y9	468 aa		27.51	■■□□□ 1.99
FARP1-231	ENST00000600648	MYH3	P11055	1940 aa		27.51	■■□□□ 1.99
FARP1-231	ENST00000600648	SPEF2	Q9C093	1822 aa		27.51	■■□□□ 1.99
FARP1-231	ENST00000600648	AOC2	O75106	756 aa		27.5	■■□□□ 1.99
FARP1-231	ENST00000600648	IGHMBP2	P38935	993 aa	Known RBP	27.5	■■□□□ 1.99
FARP1-231	ENST00000600648	LBX1	P52954	281 aa		27.5	■■□□□ 1.99
FARP1-231	ENST00000600648	CASP7	P55210	303 aa		27.5	■■□□□ 1.99
FARP1-231	ENST00000600648	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.5	■■□□□ 1.99
FARP1-231	ENST00000600648	ADM5	C9JUS6	153 aa		27.49	■■□□□ 1.99
FARP1-231	ENST00000600648	ITGA6	P23229	1130 aa		27.49	■■□□□ 1.99
FARP1-231	ENST00000600648	PLA2G12B	Q9BX93	195 aa		27.49	■■□□□ 1.99
FARP1-231	ENST00000600648	ASTN2	O75129	1339 aa	Predicted RBP	27.48	■■□□□ 1.99
FARP1-231	ENST00000600648	CCT4	P50991	539 aa	Known RBP	27.48	■■□□□ 1.99
FARP1-231	ENST00000600648	DCPS	Q96C86	337 aa	Known RBP	27.48	■■□□□ 1.99
FARP1-231	ENST00000600648	PRDM10	Q9NQV6	1147 aa		27.48	■■□□□ 1.99
FARP1-231	ENST00000600648	USP17L3	A6NCW0	530 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	USP17L4	A6NCW7	530 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	HSPA8	P11142	646 aa	Known RBP	27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	USP17L1	Q7RTZ2	530 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	PODN	Q7Z5L7	613 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	AGBL3	Q8NEM8	1001 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	FBXW7	Q969H0	707 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	MPHOSPH8	Q99549	860 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	GGA3	Q9NZ52	723 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	MED23	Q9ULK4	1368 aa		27.46	■■□□□ 1.99
FARP1-231	ENST00000600648	CSF1R	P07333	972 aa		27.45	■■□□□ 1.98
FARP1-231	ENST00000600648	CHMP3	Q9Y3E7	222 aa		27.45	■■□□□ 1.98
FARP1-231	ENST00000600648	BEND3	Q5T5X7	828 aa		27.44	■■□□□ 1.98
FARP1-231	ENST00000600648	TXNRD3	Q86VQ6	643 aa		27.44	■■□□□ 1.98
FARP1-231	ENST00000600648	BEGAIN	Q9BUH8	593 aa		27.44	■■□□□ 1.98

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