RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 BSDC1Q9NW68 430 aaPredicted RBP25.1■■□□□ 1.61
IRF3-221ENST00000598808 DDX19BQ9UMR2 479 aa25.1■■□□□ 1.61
IRF3-221ENST00000598808 LTBP3Q9NS15 1303 aa25.1■■□□□ 1.61
IRF3-221ENST00000598808 C6orf229H3BNL8 230 aa25.09■■□□□ 1.61
IRF3-221ENST00000598808 PDE3AQ14432 1141 aa25.09■■□□□ 1.61
IRF3-221ENST00000598808 CCDC88AQ3V6T2 1871 aa25.09■■□□□ 1.61
IRF3-221ENST00000598808 LDHAL6AQ6ZMR3 332 aa25.09■■□□□ 1.61
IRF3-221ENST00000598808 SUPT20HQ8NEM7 779 aa25.09■■□□□ 1.61
IRF3-221ENST00000598808 PSMD1Q99460 953 aa25.09■■□□□ 1.61
IRF3-221ENST00000598808 KLHDC4Q8TBB5 520 aa25.08■■□□□ 1.6
IRF3-221ENST00000598808 SBF1O95248 1867 aa25.07■■□□□ 1.6
IRF3-221ENST00000598808 ZBTB7BO15156 539 aaPredicted RBP25.07■■□□□ 1.6
IRF3-221ENST00000598808 PPIP5K2O43314 1243 aa25.07■■□□□ 1.6
IRF3-221ENST00000598808 UFL1O94874 794 aa25.07■■□□□ 1.6
IRF3-221ENST00000598808 IARSP41252 1262 aaKnown RBP25.07■■□□□ 1.6
IRF3-221ENST00000598808 GGA1Q9UJY5 639 aa25.07■■□□□ 1.6
IRF3-221ENST00000598808 MINPP1Q9UNW1 487 aa25.07■■□□□ 1.6
IRF3-221ENST00000598808 SNED1Q8TER0 1413 aa25.07■■□□□ 1.6
IRF3-221ENST00000598808 XDHP47989 1333 aa25.06■■□□□ 1.6
IRF3-221ENST00000598808 SRGAP3O43295 1099 aa25.06■■□□□ 1.6
IRF3-221ENST00000598808 KCNJ4P48050 445 aa25.06■■□□□ 1.6
IRF3-221ENST00000598808 PRELPP51888 382 aa25.06■■□□□ 1.6
IRF3-221ENST00000598808 LARGE2Q8N3Y3 721 aa25.06■■□□□ 1.6
IRF3-221ENST00000598808 TIAM2Q8IVF5 1701 aa25.06■■□□□ 1.6
IRF3-221ENST00000598808 GPR101Q96P66 508 aaPredicted RBP25.05■■□□□ 1.6
IRF3-221ENST00000598808 SIL1Q9H173 461 aa25.05■■□□□ 1.6
IRF3-221ENST00000598808 CHMP4BQ9H444 224 aaKnown RBP25.05■■□□□ 1.6
IRF3-221ENST00000598808 CHRNDQ07001 517 aa25.04■■□□□ 1.6
IRF3-221ENST00000598808 AOC3Q16853 763 aa25.04■■□□□ 1.6
IRF3-221ENST00000598808 ANKRD2Q9GZV1 360 aa25.04■■□□□ 1.6
IRF3-221ENST00000598808 RIMBP2O15034 1052 aa25.03■■□□□ 1.6
IRF3-221ENST00000598808 HELBQ8NG08 1087 aaPredicted RBP25.03■■□□□ 1.6
IRF3-221ENST00000598808 PUS3Q9BZE2 481 aaKnown RBP25.03■■□□□ 1.6
IRF3-221ENST00000598808 PPP4R2Q9NY27 417 aa25.03■■□□□ 1.6
IRF3-221ENST00000598808 DUOX1Q9NRD9 1551 aa25.03■■□□□ 1.6
IRF3-221ENST00000598808 TBC1D16Q8TBP0 767 aa25.02■■□□□ 1.6
IRF3-221ENST00000598808 JDP2Q8WYK2 163 aa25.02■■□□□ 1.6
IRF3-221ENST00000598808 EYA3Q99504 573 aa25.02■■□□□ 1.6
IRF3-221ENST00000598808 POLLQ9UGP5 575 aa25.02■■□□□ 1.6
IRF3-221ENST00000598808 TAF5LO75529 589 aa25.02■■□□□ 1.6
IRF3-221ENST00000598808 WASHC4Q2M389 1173 aa25.02■■□□□ 1.6
IRF3-221ENST00000598808 RTFDC1Q9BY42 306 aaPredicted RBP25.02■■□□□ 1.6
IRF3-221ENST00000598808 G3V3G9 751 aa25.01■■□□□ 1.59
IRF3-221ENST00000598808 ATP2B4P23634 1241 aa25.01■■□□□ 1.59
IRF3-221ENST00000598808 LRRC24Q50LG9 513 aa25.01■■□□□ 1.59
IRF3-221ENST00000598808 METTL24Q5JXM2 366 aa25.01■■□□□ 1.59
IRF3-221ENST00000598808 DCAF8Q5TAQ9 597 aa25.01■■□□□ 1.59
IRF3-221ENST00000598808 NIM1KQ8IY84 436 aa25.01■■□□□ 1.59
IRF3-221ENST00000598808 ZNF526Q8TF50 670 aaPredicted RBP25.01■■□□□ 1.59
IRF3-221ENST00000598808 PODXL2Q9NZ53 605 aa25.01■■□□□ 1.59
IRF3-221ENST00000598808 PA2G4Q9UQ80 394 aaKnown RBP25.01■■□□□ 1.59
IRF3-221ENST00000598808 LTBP1Q14766 1721 aa25■■□□□ 1.59
IRF3-221ENST00000598808 RFX5P48382 616 aaPredicted RBP25■■□□□ 1.59
IRF3-221ENST00000598808 DICER1Q9UPY3 1922 aaKnown RBP24.99■■□□□ 1.59
IRF3-221ENST00000598808 PTPN12Q05209 780 aaKnown RBP24.99■■□□□ 1.59
IRF3-221ENST00000598808 ZC3H12CQ9C0D7 883 aaKnown RBP24.99■■□□□ 1.59
IRF3-221ENST00000598808 PNMA6EA0A0J9YXQ4 647 aa24.98■■□□□ 1.59
IRF3-221ENST00000598808 ZNF804BA4D1E1 1349 aa24.98■■□□□ 1.59
IRF3-221ENST00000598808 MROH5Q6ZUA9 1318 aa24.98■■□□□ 1.59
IRF3-221ENST00000598808 A0A1B0GUL6 1792 aa24.97■■□□□ 1.59
IRF3-221ENST00000598808 EYA2O00167 538 aa24.97■■□□□ 1.59
IRF3-221ENST00000598808 MTX1Q13505 466 aa24.97■■□□□ 1.59
IRF3-221ENST00000598808 CRBNQ96SW2 442 aa24.97■■□□□ 1.59
IRF3-221ENST00000598808 KIAA2012Q0VF49 1180 aa24.96■■□□□ 1.59
IRF3-221ENST00000598808 ZBTB40Q9NUA8 1239 aa24.96■■□□□ 1.59
IRF3-221ENST00000598808 LEMD3Q9Y2U8 911 aa24.96■■□□□ 1.59
IRF3-221ENST00000598808 WTIPA6NIX2 430 aaPredicted RBP24.96■■□□□ 1.59
IRF3-221ENST00000598808 OS9Q13438 667 aaPredicted RBP24.96■■□□□ 1.59
IRF3-221ENST00000598808 DOK7Q18PE1 504 aa24.96■■□□□ 1.59
IRF3-221ENST00000598808 CEP85Q6P2H3 762 aa24.96■■□□□ 1.59
IRF3-221ENST00000598808 DBNDD1Q9H9R9 158 aa24.96■■□□□ 1.59
IRF3-221ENST00000598808 RIPOR2Q9Y4F9 1068 aa24.96■■□□□ 1.59
IRF3-221ENST00000598808 COL4A5P29400 1685 aa24.95■■□□□ 1.58
IRF3-221ENST00000598808 SNAP23O00161 211 aa24.95■■□□□ 1.58
IRF3-221ENST00000598808 EIF6P56537 245 aaKnown RBP24.95■■□□□ 1.58
IRF3-221ENST00000598808 ATP8B2P98198 1209 aa24.95■■□□□ 1.58
IRF3-221ENST00000598808 VPS33BQ9H267 617 aa24.95■■□□□ 1.58
IRF3-221ENST00000598808 GPBP1L1Q9HC44 474 aaPredicted RBP24.95■■□□□ 1.58
IRF3-221ENST00000598808 COPRSQ9NQ92 184 aa24.94■■□□□ 1.58
IRF3-221ENST00000598808 ZC3H4Q9UPT8 1303 aaKnown RBP24.94■■□□□ 1.58
IRF3-221ENST00000598808 IRX6P78412 446 aaPredicted RBP24.93■■□□□ 1.58
IRF3-221ENST00000598808 MED23Q9ULK4 1368 aa24.93■■□□□ 1.58
IRF3-221ENST00000598808 KLRK1P26718 216 aa24.92■■□□□ 1.58
IRF3-221ENST00000598808 G3BP1Q13283 466 aaKnown RBP eCLIP24.92■■□□□ 1.58
IRF3-221ENST00000598808 DPY19L2Q6NUT2 758 aa24.92■■□□□ 1.58
IRF3-221ENST00000598808 ZNF541Q9H0D2 1346 aa24.92■■□□□ 1.58
IRF3-221ENST00000598808 ECE2O60344 883 aa24.91■■□□□ 1.58
IRF3-221ENST00000598808 CIAO1O76071 339 aa24.91■■□□□ 1.58
IRF3-221ENST00000598808 IL15P40933 162 aaPredicted RBP24.91■■□□□ 1.58
IRF3-221ENST00000598808 ZNRF3Q9ULT6 936 aa24.91■■□□□ 1.58
IRF3-221ENST00000598808 GJA3Q9Y6H8 435 aa24.91■■□□□ 1.58
IRF3-221ENST00000598808 HMMRO75330 724 aa24.9■■□□□ 1.58
IRF3-221ENST00000598808 ATG9AQ7Z3C6 839 aa24.9■■□□□ 1.58
IRF3-221ENST00000598808 SSH3Q8TE77 659 aa24.9■■□□□ 1.58
IRF3-221ENST00000598808 CEP126Q9P2H0 1117 aa24.9■■□□□ 1.58
IRF3-221ENST00000598808 FBXO3Q9UK99 471 aa24.9■■□□□ 1.58
IRF3-221ENST00000598808 KDM2BQ8NHM5 1336 aa24.9■■□□□ 1.58
IRF3-221ENST00000598808 SURF6O75683 361 aaKnown RBP24.89■■□□□ 1.58
IRF3-221ENST00000598808 POLA2Q14181 598 aa24.89■■□□□ 1.58
IRF3-221ENST00000598808 FBXW7Q969H0 707 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms