RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 DBNLQ9UJU6 430 aaKnown RBP20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 TRMT1Q9NXH9 659 aaKnown RBP20.4■□□□□ 0.86
ARHGEF1-213ENST00000595897 A0A087WWV3 80 aa20.39■□□□□ 0.85
ARHGEF1-213ENST00000595897 USP27XA6NNY8 438 aa20.39■□□□□ 0.85
ARHGEF1-213ENST00000595897 PPFIA3O75145 1194 aa20.39■□□□□ 0.85
ARHGEF1-213ENST00000595897 CHD2O14647 1828 aaKnown RBP20.39■□□□□ 0.85
ARHGEF1-213ENST00000595897 ATP5JP18859 108 aa20.39■□□□□ 0.85
ARHGEF1-213ENST00000595897 ME1P48163 572 aa20.39■□□□□ 0.85
ARHGEF1-213ENST00000595897 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
ARHGEF1-213ENST00000595897 EPHA10Q5JZY3 1008 aa20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 MYD88Q99836 296 aa20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 TFCP2Q12800 502 aa20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 MCMDC2Q4G0Z9 681 aa20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 ZNF771Q7L3S4 317 aaPredicted RBP20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 THEMISQ8N1K5 641 aaPredicted RBP20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 ANO10Q9NW15 660 aa20.38■□□□□ 0.85
ARHGEF1-213ENST00000595897 COL15A1P39059 1388 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 JCADQ9P266 1359 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 NEURL1BA8MQ27 555 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 GCKRQ14397 625 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 TNNI3KQ59H18 835 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 DDX46Q7L014 1031 aaKnown RBP20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 GOLPH3LQ9H4A5 285 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 FPGT-TNNI3KV9GXZ4 949 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 CCT2P78371 535 aaKnown RBP20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 RCOR1Q9UKL0 485 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 V9GYY5 206 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 KDM3BQ7LBC6 1761 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 CEP57L1Q8IYX8 460 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 USP28Q96RU2 1077 aa20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 LLPHQ9BRT6 129 aaKnown RBP20.37■□□□□ 0.85
ARHGEF1-213ENST00000595897 PTPDC1A2A3K4 754 aa20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 RBM6P78332 1123 aaKnown RBP20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 ERCC4Q92889 916 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 ZNF396Q96N95 335 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 APOBRQ0VD83 1088 aa20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 NAA16Q6N069 864 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 LMOD2Q6P5Q4 547 aa20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 FSIP1Q8NA03 581 aa20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 NSUN7Q8NE18 718 aaKnown RBP20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 ZNF215Q9UL58 517 aaPredicted RBP20.36■□□□□ 0.85
ARHGEF1-213ENST00000595897 PFKFB2O60825 505 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 ADD1P35611 737 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 ZRSR1Q15695 479 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 DDX41Q9UJV9 622 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 SLIT1O75093 1534 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 HMGB1P09429 215 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 FAM160A1Q05DH4 1040 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 PDIA6Q15084 440 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 ESCO1Q5FWF5 840 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 AOPEPQ8N6M6 819 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 DBNDD2Q9BQY9 259 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 SDF4Q9BRK5 362 aa20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 NAT10Q9H0A0 1025 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-213ENST00000595897 SNW1Q13573 536 aaKnown RBP20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 DHX32Q7L7V1 743 aaKnown RBP20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 PXDNQ92626 1479 aa20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 ZNF609O15014 1411 aa20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 DHX40Q8IX18 779 aaKnown RBP20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 NCOA5Q9HCD5 579 aaKnown RBP20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 COPRSQ9NQ92 184 aa20.34■□□□□ 0.85
ARHGEF1-213ENST00000595897 STOX1Q6ZVD7 989 aa20.33■□□□□ 0.85
ARHGEF1-213ENST00000595897 KIF18AQ8NI77 898 aa20.33■□□□□ 0.85
ARHGEF1-213ENST00000595897 NYAP1Q6ZVC0 841 aa20.33■□□□□ 0.84
ARHGEF1-213ENST00000595897 PTPN12Q05209 780 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-213ENST00000595897 UBE3BQ7Z3V4 1068 aa20.32■□□□□ 0.84
ARHGEF1-213ENST00000595897 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
ARHGEF1-213ENST00000595897 MARF1Q9Y4F3 1742 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-213ENST00000595897 NCAPD2Q15021 1401 aa20.32■□□□□ 0.84
ARHGEF1-213ENST00000595897 METTL22Q9BUU2 404 aaPredicted RBP20.32■□□□□ 0.84
ARHGEF1-213ENST00000595897 CTDNEP1O95476 244 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 CCZ1BP86790 482 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 CCZ1P86791 482 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 CCAR2Q8N163 923 aaKnown RBP20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 ZNF397Q8NF99 534 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 HAUS7Q99871 368 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 NPHP1O15259 732 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 GSDMDP57764 484 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 SF3A1Q15459 793 aaKnown RBP20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 ZNF790Q6PG37 636 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 ANKRD13DQ6ZTN6 518 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 LTN1O94822 1766 aa20.31■□□□□ 0.84
ARHGEF1-213ENST00000595897 GCP02774 474 aa20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 ATL3Q6DD88 541 aa20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 ENGASEQ8NFI3 743 aa20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 NEUROD6Q96NK8 337 aa20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 GABPB1Q06547 395 aaPredicted RBP20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 ELF2Q15723 593 aa20.3■□□□□ 0.84
ARHGEF1-213ENST00000595897 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms