RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 GPR101Q96P66 508 aaPredicted RBP20.38■□□□□ 0.85
IRF3-210ENST00000595240 BSDC1Q9NW68 430 aaPredicted RBP20.38■□□□□ 0.85
IRF3-210ENST00000595240 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
IRF3-210ENST00000595240 CLEC11AQ9Y240 323 aa20.38■□□□□ 0.85
IRF3-210ENST00000595240 XDHP47989 1333 aa20.37■□□□□ 0.85
IRF3-210ENST00000595240 USP50Q70EL3 339 aaPredicted RBP20.37■□□□□ 0.85
IRF3-210ENST00000595240 CDCA7LQ96GN5 454 aa20.37■□□□□ 0.85
IRF3-210ENST00000595240 DBNDD1Q9H9R9 158 aa20.37■□□□□ 0.85
IRF3-210ENST00000595240 FAM161AQ3B820 660 aa20.36■□□□□ 0.85
IRF3-210ENST00000595240 TRMT2AQ8IZ69 625 aaKnown RBP20.36■□□□□ 0.85
IRF3-210ENST00000595240 MRPL50Q8N5N7 158 aaKnown RBP20.36■□□□□ 0.85
IRF3-210ENST00000595240 ZC3H12CQ9C0D7 883 aaKnown RBP20.36■□□□□ 0.85
IRF3-210ENST00000595240 ADARB2Q9NS39 739 aaKnown RBP20.36■□□□□ 0.85
IRF3-210ENST00000595240 MINPP1Q9UNW1 487 aa20.36■□□□□ 0.85
IRF3-210ENST00000595240 ECE2O60344 883 aa20.35■□□□□ 0.85
IRF3-210ENST00000595240 ITGA6P23229 1130 aa20.35■□□□□ 0.85
IRF3-210ENST00000595240 DOK7Q18PE1 504 aa20.35■□□□□ 0.85
IRF3-210ENST00000595240 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
IRF3-210ENST00000595240 CNTROBQ8N137 903 aa20.35■□□□□ 0.85
IRF3-210ENST00000595240 CREBZFQ9NS37 354 aa20.35■□□□□ 0.85
IRF3-210ENST00000595240 MYH3P11055 1940 aa20.34■□□□□ 0.85
IRF3-210ENST00000595240 GRM8O00222 908 aa20.34■□□□□ 0.85
IRF3-210ENST00000595240 ALDH1L1O75891 902 aa20.34■□□□□ 0.85
IRF3-210ENST00000595240 ATP2B4P23634 1241 aa20.34■□□□□ 0.85
IRF3-210ENST00000595240 FOXO4P98177 505 aa20.34■□□□□ 0.85
IRF3-210ENST00000595240 SSH1Q8WYL5 1049 aa20.34■□□□□ 0.85
IRF3-210ENST00000595240 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
IRF3-210ENST00000595240 PSMD14O00487 310 aa20.33■□□□□ 0.85
IRF3-210ENST00000595240 IGHMBP2P38935 993 aaKnown RBP20.33■□□□□ 0.85
IRF3-210ENST00000595240 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
IRF3-210ENST00000595240 JMYQ8N9B5 988 aa20.33■□□□□ 0.85
IRF3-210ENST00000595240 SRCIN1Q9C0H9 1055 aa20.33■□□□□ 0.85
IRF3-210ENST00000595240 KCNQ5Q9NR82 932 aa20.33■□□□□ 0.85
IRF3-210ENST00000595240 DPF2Q92785 391 aa20.32■□□□□ 0.84
IRF3-210ENST00000595240 ZBTB12Q9Y330 459 aaPredicted RBP20.32■□□□□ 0.84
IRF3-210ENST00000595240 PTPRCP08575 1304 aa20.31■□□□□ 0.84
IRF3-210ENST00000595240 WTIPA6NIX2 430 aaPredicted RBP20.31■□□□□ 0.84
IRF3-210ENST00000595240 CNOT7Q9UIV1 285 aaKnown RBP20.31■□□□□ 0.84
IRF3-210ENST00000595240 ANKRD18BA2A2Z9 1011 aa20.3■□□□□ 0.84
IRF3-210ENST00000595240 RPS12P25398 132 aaKnown RBP20.3■□□□□ 0.84
IRF3-210ENST00000595240 ALDH1L2Q3SY69 923 aa20.3■□□□□ 0.84
IRF3-210ENST00000595240 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
IRF3-210ENST00000595240 C9orf78Q9NZ63 289 aaPredicted RBP20.3■□□□□ 0.84
IRF3-210ENST00000595240 SHTN1A0MZ66 631 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 TMEM88BA6NKF7 163 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 G3V3G9 751 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 VIL1P09327 827 aaKnown RBP20.29■□□□□ 0.84
IRF3-210ENST00000595240 CCT4P50991 539 aaKnown RBP20.29■□□□□ 0.84
IRF3-210ENST00000595240 IFIT5Q13325 482 aaKnown RBP20.29■□□□□ 0.84
IRF3-210ENST00000595240 DCAF8Q5TAQ9 597 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
IRF3-210ENST00000595240 LMBR1LQ6UX01 489 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 MICALL2Q8IY33 904 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 MPHOSPH8Q99549 860 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 MED23Q9ULK4 1368 aa20.29■□□□□ 0.84
IRF3-210ENST00000595240 H7C1D1 291 aa20.28■□□□□ 0.84
IRF3-210ENST00000595240 CT47B1P0C2W7 299 aaPredicted RBP20.28■□□□□ 0.84
IRF3-210ENST00000595240 HIRAP54198 1017 aaPredicted RBP20.28■□□□□ 0.84
IRF3-210ENST00000595240 MIER1Q8N108 512 aa20.28■□□□□ 0.84
IRF3-210ENST00000595240 TRPM4Q8TD43 1214 aa20.28■□□□□ 0.84
IRF3-210ENST00000595240 ANKRD2Q9GZV1 360 aa20.28■□□□□ 0.84
IRF3-210ENST00000595240 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
IRF3-210ENST00000595240 LEMD3Q9Y2U8 911 aa20.28■□□□□ 0.84
IRF3-210ENST00000595240 UTYO14607 1347 aa20.27■□□□□ 0.84
IRF3-210ENST00000595240 PODNQ7Z5L7 613 aa20.27■□□□□ 0.84
IRF3-210ENST00000595240 ZC3H15Q8WU90 426 aaKnown RBP20.27■□□□□ 0.84
IRF3-210ENST00000595240 ZNF609O15014 1411 aa20.27■□□□□ 0.83
IRF3-210ENST00000595240 NBPF7P0C2Y1 421 aaPredicted RBP20.26■□□□□ 0.83
IRF3-210ENST00000595240 KAZALD1Q96I82 304 aa20.26■□□□□ 0.83
IRF3-210ENST00000595240 SMC4Q9NTJ3 1288 aa20.26■□□□□ 0.83
IRF3-210ENST00000595240 CHMP3Q9Y3E7 222 aa20.26■□□□□ 0.83
IRF3-210ENST00000595240 ZNF804BA4D1E1 1349 aa20.26■□□□□ 0.83
IRF3-210ENST00000595240 CNTNAP1P78357 1384 aa20.25■□□□□ 0.83
IRF3-210ENST00000595240 SCN9AQ15858 1988 aa20.25■□□□□ 0.83
IRF3-210ENST00000595240 CHRNDQ07001 517 aa20.25■□□□□ 0.83
IRF3-210ENST00000595240 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
IRF3-210ENST00000595240 SUCLG2Q96I99 432 aa20.25■□□□□ 0.83
IRF3-210ENST00000595240 MKRN1Q9UHC7 482 aaKnown RBP20.25■□□□□ 0.83
IRF3-210ENST00000595240 SPEF2Q9C093 1822 aa20.25■□□□□ 0.83
IRF3-210ENST00000595240 TRAF5O00463 557 aa20.24■□□□□ 0.83
IRF3-210ENST00000595240 FMR1Q06787 632 aaKnown RBP eCLIP20.24■□□□□ 0.83
IRF3-210ENST00000595240 RSBN1LQ6PCB5 846 aaPredicted RBP20.24■□□□□ 0.83
IRF3-210ENST00000595240 SAMD7Q7Z3H4 446 aa20.24■□□□□ 0.83
IRF3-210ENST00000595240 TXNRD3Q86VQ6 643 aa20.24■□□□□ 0.83
IRF3-210ENST00000595240 USP17L3A6NCW0 530 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 USP17L4A6NCW7 530 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 EGFRP00533 1210 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 KLRK1P26718 216 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 USP17L1Q7RTZ2 530 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 AGBL3Q8NEM8 1001 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 GMLQ99445 158 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 COA1Q9GZY4 146 aa20.23■□□□□ 0.83
IRF3-210ENST00000595240 BRPF1P55201 1214 aaPredicted RBP20.22■□□□□ 0.83
IRF3-210ENST00000595240 TBC1D10BQ4KMP7 808 aaPredicted RBP20.22■□□□□ 0.83
IRF3-210ENST00000595240 ZNF594Q96JF6 807 aaPredicted RBP20.22■□□□□ 0.83
IRF3-210ENST00000595240 PCNTO95613 3336 aa20.21■□□□□ 0.83
IRF3-210ENST00000595240 KCNJ4P48050 445 aa20.21■□□□□ 0.83
IRF3-210ENST00000595240 ZNF280AP59817 542 aaPredicted RBP20.21■□□□□ 0.83
IRF3-210ENST00000595240 RABL6Q3YEC7 729 aaPredicted RBP20.21■□□□□ 0.83
IRF3-210ENST00000595240 TAF7LQ5H9L4 462 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms