RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 TCIRG1Q13488 830 aa19.94■□□□□ 0.78
FOXA3-202ENST00000594297 KIF4BQ2VIQ3 1234 aa19.94■□□□□ 0.78
FOXA3-202ENST00000594297 RBM26Q5T8P6 1007 aaKnown RBP19.94■□□□□ 0.78
FOXA3-202ENST00000594297 CELF1Q92879 486 aaKnown RBP19.94■□□□□ 0.78
FOXA3-202ENST00000594297 KCNQ5Q9NR82 932 aa19.94■□□□□ 0.78
FOXA3-202ENST00000594297 GGA3Q9NZ52 723 aa19.94■□□□□ 0.78
FOXA3-202ENST00000594297 PAPPA2Q9BXP8 1791 aa19.93■□□□□ 0.78
FOXA3-202ENST00000594297 PSME4Q14997 1843 aa19.93■□□□□ 0.78
FOXA3-202ENST00000594297 HNRNPUQ00839 825 aaKnown RBP eCLIP19.93■□□□□ 0.788e-7■□□□□ 9.3
FOXA3-202ENST00000594297 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
FOXA3-202ENST00000594297 NSFL1CQ9UNZ2 370 aaKnown RBP19.93■□□□□ 0.78
FOXA3-202ENST00000594297 ASTN2O75129 1339 aaPredicted RBP19.93■□□□□ 0.78
FOXA3-202ENST00000594297 GPSM2P81274 684 aa19.92■□□□□ 0.78
FOXA3-202ENST00000594297 CTU1Q7Z7A3 348 aaKnown RBP19.92■□□□□ 0.78
FOXA3-202ENST00000594297 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
FOXA3-202ENST00000594297 POLLQ9UGP5 575 aa19.92■□□□□ 0.78
FOXA3-202ENST00000594297 C6orf229H3BNL8 230 aa19.91■□□□□ 0.78
FOXA3-202ENST00000594297 DOK7Q18PE1 504 aa19.91■□□□□ 0.78
FOXA3-202ENST00000594297 PRPF38BQ5VTL8 546 aaKnown RBP19.91■□□□□ 0.78
FOXA3-202ENST00000594297 RASAL3Q86YV0 1011 aa19.91■□□□□ 0.78
FOXA3-202ENST00000594297 CDCA5Q96FF9 252 aa19.91■□□□□ 0.78
FOXA3-202ENST00000594297 CSRNP1Q96S65 589 aa19.91■□□□□ 0.78
FOXA3-202ENST00000594297 SULF1Q8IWU6 871 aa19.9■□□□□ 0.78
FOXA3-202ENST00000594297 ZNF609O15014 1411 aa19.89■□□□□ 0.77
FOXA3-202ENST00000594297 SF3B3Q15393 1217 aaKnown RBP19.88■□□□□ 0.77
FOXA3-202ENST00000594297 KRT24Q2M2I5 525 aa19.88■□□□□ 0.77
FOXA3-202ENST00000594297 FAM89AQ96GI7 184 aa19.88■□□□□ 0.77
FOXA3-202ENST00000594297 EYA3Q99504 573 aa19.88■□□□□ 0.77
FOXA3-202ENST00000594297 HPS5Q9UPZ3 1129 aa19.88■□□□□ 0.77
FOXA3-202ENST00000594297 APAF1O14727 1248 aa19.87■□□□□ 0.77
FOXA3-202ENST00000594297 TBC1D16Q8TBP0 767 aa19.87■□□□□ 0.77
FOXA3-202ENST00000594297 BABAM1Q9NWV8 329 aa19.87■□□□□ 0.77
FOXA3-202ENST00000594297 CHPF2Q9P2E5 772 aa19.87■□□□□ 0.77
FOXA3-202ENST00000594297 RIPK4P57078 832 aa19.86■□□□□ 0.77
FOXA3-202ENST00000594297 LMOD3Q0VAK6 560 aa19.86■□□□□ 0.77
FOXA3-202ENST00000594297 NCBP3Q53F19 620 aaKnown RBP19.86■□□□□ 0.77
FOXA3-202ENST00000594297 ANGEL2Q5VTE6 544 aaKnown RBP19.86■□□□□ 0.77
FOXA3-202ENST00000594297 ISCA1Q9BUE6 129 aa19.86■□□□□ 0.77
FOXA3-202ENST00000594297 VIL1P09327 827 aaKnown RBP19.85■□□□□ 0.77
FOXA3-202ENST00000594297 RTL5Q5HYW3 569 aaPredicted RBP19.85■□□□□ 0.77
FOXA3-202ENST00000594297 ZNF646O15015 1829 aaPredicted RBP19.85■□□□□ 0.77
FOXA3-202ENST00000594297 ATP5J2-PTCD1G3V325 749 aa19.84■□□□□ 0.77
FOXA3-202ENST00000594297 PLBD2Q8NHP8 589 aa19.84■□□□□ 0.77
FOXA3-202ENST00000594297 TMPOP42166 694 aaKnown RBP19.83■□□□□ 0.77
FOXA3-202ENST00000594297 ZNF280AP59817 542 aaPredicted RBP19.83■□□□□ 0.77
FOXA3-202ENST00000594297 NEUROD2Q15784 382 aa19.83■□□□□ 0.77
FOXA3-202ENST00000594297 REM2Q8IYK8 340 aaPredicted RBP19.83■□□□□ 0.77
FOXA3-202ENST00000594297 UFL1O94874 794 aa19.82■□□□□ 0.76
FOXA3-202ENST00000594297 SCARF1Q14162 830 aa19.82■□□□□ 0.76
FOXA3-202ENST00000594297 MOB2Q70IA6 237 aa19.82■□□□□ 0.76
FOXA3-202ENST00000594297 ZC3H12CQ9C0D7 883 aaKnown RBP19.82■□□□□ 0.76
FOXA3-202ENST00000594297 PODXL2Q9NZ53 605 aa19.82■□□□□ 0.76
FOXA3-202ENST00000594297 IRS4O14654 1257 aaPredicted RBP19.81■□□□□ 0.76
FOXA3-202ENST00000594297 FKBP1BP68106 108 aa19.81■□□□□ 0.76
FOXA3-202ENST00000594297 RSBN1LQ6PCB5 846 aaPredicted RBP19.81■□□□□ 0.76
FOXA3-202ENST00000594297 ZNF296Q8WUU4 475 aaPredicted RBP19.81■□□□□ 0.76
FOXA3-202ENST00000594297 SCAF8Q9UPN6 1271 aaKnown RBP19.81■□□□□ 0.76
FOXA3-202ENST00000594297 SALL2Q9Y467 1007 aaPredicted RBP19.81■□□□□ 0.76
FOXA3-202ENST00000594297 ZBED9Q6R2W3 1325 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 TBC1D8O95759 1140 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 RPS8P62241 208 aaKnown RBP19.8■□□□□ 0.76
FOXA3-202ENST00000594297 CALD1Q05682 793 aaKnown RBP19.8■□□□□ 0.76
FOXA3-202ENST00000594297 HDGFL1Q5TGJ6 251 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 ANKRD13DQ6ZTN6 518 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 AGBL3Q8NEM8 1001 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 SEC31BQ9NQW1 1179 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 HDAC9Q9UKV0 1011 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 SPEF2Q9C093 1822 aa19.8■□□□□ 0.76
FOXA3-202ENST00000594297 PITPNM2Q9BZ72 1349 aa19.79■□□□□ 0.76
FOXA3-202ENST00000594297 G3V3G9 751 aa19.79■□□□□ 0.76
FOXA3-202ENST00000594297 PKN2Q16513 984 aaKnown RBP19.79■□□□□ 0.76
FOXA3-202ENST00000594297 CCDC27Q2M243 656 aa19.79■□□□□ 0.76
FOXA3-202ENST00000594297 DCAF8Q5TAQ9 597 aa19.79■□□□□ 0.76
FOXA3-202ENST00000594297 MYOZ2Q9NPC6 264 aa19.79■□□□□ 0.76
FOXA3-202ENST00000594297 GGA1Q9UJY5 639 aa19.79■□□□□ 0.76
FOXA3-202ENST00000594297 GMLQ99445 158 aa19.78■□□□□ 0.76
FOXA3-202ENST00000594297 ANKIB1Q9P2G1 1089 aa19.78■□□□□ 0.76
FOXA3-202ENST00000594297 CHL1O00533 1208 aa19.77■□□□□ 0.76
FOXA3-202ENST00000594297 UBE2Q2LH0YL09 131 aa19.76■□□□□ 0.75
FOXA3-202ENST00000594297 PRAMEF18Q5VWM3 479 aa19.76■□□□□ 0.75
FOXA3-202ENST00000594297 DBF4Q9UBU7 674 aaPredicted RBP19.76■□□□□ 0.75
FOXA3-202ENST00000594297 LAS1LQ9Y4W2 734 aaKnown RBP19.76■□□□□ 0.75
FOXA3-202ENST00000594297 USP17L8P0C7I0 530 aa19.75■□□□□ 0.75
FOXA3-202ENST00000594297 GPR25O00155 361 aa19.74■□□□□ 0.75
FOXA3-202ENST00000594297 HOXB7P09629 217 aa19.74■□□□□ 0.75
FOXA3-202ENST00000594297 MKRN3Q13064 507 aaKnown RBP19.74■□□□□ 0.75
FOXA3-202ENST00000594297 TRIM28Q13263 835 aaKnown RBP19.74■□□□□ 0.75
FOXA3-202ENST00000594297 FBXO46Q6PJ61 603 aaPredicted RBP19.74■□□□□ 0.75
FOXA3-202ENST00000594297 WDR63Q8IWG1 891 aa19.74■□□□□ 0.75
FOXA3-202ENST00000594297 HTTP42858 3142 aa19.74■□□□□ 0.75
FOXA3-202ENST00000594297 XDHP47989 1333 aa19.74■□□□□ 0.75
FOXA3-202ENST00000594297 CENPBP07199 599 aaPredicted RBP19.73■□□□□ 0.75
FOXA3-202ENST00000594297 TTLL12Q14166 644 aaPredicted RBP19.73■□□□□ 0.75
FOXA3-202ENST00000594297 NBPF9Q3BBW0 867 aa19.73■□□□□ 0.75
FOXA3-202ENST00000594297 WWC1Q8IX03 1113 aa19.73■□□□□ 0.75
FOXA3-202ENST00000594297 ZBTB38Q8NAP3 1195 aaPredicted RBP19.73■□□□□ 0.75
FOXA3-202ENST00000594297 CCDC85AQ96PX6 553 aaPredicted RBP19.73■□□□□ 0.75
FOXA3-202ENST00000594297 LAMB1P07942 1786 aa19.72■□□□□ 0.75
FOXA3-202ENST00000594297 USP17L3A6NCW0 530 aa19.72■□□□□ 0.75
FOXA3-202ENST00000594297 USP17L4A6NCW7 530 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms