RNA–Protein interactions for RNA: ENST00000586481.5

PTBP1-209, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-209ENST00000586481 ITGA6P23229 1130 aa25.22■■□□□ 1.63
PTBP1-209ENST00000586481 GMPSP49915 693 aaPredicted RBP25.22■■□□□ 1.63
PTBP1-209ENST00000586481 PNMA8AQ86V59 439 aaPredicted RBP25.22■■□□□ 1.63
PTBP1-209ENST00000586481 SRCIN1Q9C0H9 1055 aa25.22■■□□□ 1.63
PTBP1-209ENST00000586481 PODXL2Q9NZ53 605 aa25.22■■□□□ 1.63
PTBP1-209ENST00000586481 CHMP3Q9Y3E7 222 aa25.22■■□□□ 1.63
PTBP1-209ENST00000586481 ZC3H12CQ9C0D7 883 aaKnown RBP25.21■■□□□ 1.63
PTBP1-209ENST00000586481 C9orf78Q9NZ63 289 aaPredicted RBP25.21■■□□□ 1.63
PTBP1-209ENST00000586481 LTBP1Q14766 1721 aa25.2■■□□□ 1.63
PTBP1-209ENST00000586481 RTL9Q8NET4 1388 aa25.2■■□□□ 1.63
PTBP1-209ENST00000586481 XDHP47989 1333 aa25.2■■□□□ 1.62
PTBP1-209ENST00000586481 WTIPA6NIX2 430 aaPredicted RBP25.2■■□□□ 1.62
PTBP1-209ENST00000586481 G3V3G9 751 aa25.2■■□□□ 1.62
PTBP1-209ENST00000586481 GRM8O00222 908 aa25.2■■□□□ 1.62
PTBP1-209ENST00000586481 ECE2O60344 883 aa25.2■■□□□ 1.62
PTBP1-209ENST00000586481 IGHMBP2P38935 993 aaKnown RBP25.2■■□□□ 1.62
PTBP1-209ENST00000586481 TNIP1Q15025 636 aa25.2■■□□□ 1.62
PTBP1-209ENST00000586481 DCAF8Q5TAQ9 597 aa25.2■■□□□ 1.62
PTBP1-209ENST00000586481 TRMT2AQ8IZ69 625 aaKnown RBP25.2■■□□□ 1.62
PTBP1-209ENST00000586481 KCNQ5Q9NR82 932 aa25.2■■□□□ 1.62
PTBP1-209ENST00000586481 BSDC1Q9NW68 430 aaPredicted RBP25.2■■□□□ 1.62
PTBP1-209ENST00000586481 CSF1RP07333 972 aa25.19■■□□□ 1.62
PTBP1-209ENST00000586481 FOXO4P98177 505 aa25.19■■□□□ 1.62
PTBP1-209ENST00000586481 MAP1SQ66K74 1059 aaPredicted RBP25.19■■□□□ 1.62
PTBP1-209ENST00000586481 SMC4Q9NTJ3 1288 aa25.19■■□□□ 1.62
PTBP1-209ENST00000586481 GPRC5DQ9NZD1 345 aa25.19■■□□□ 1.62
PTBP1-209ENST00000586481 MINPP1Q9UNW1 487 aa25.19■■□□□ 1.62
PTBP1-209ENST00000586481 ALDH1L1O75891 902 aa25.18■■□□□ 1.62
PTBP1-209ENST00000586481 EPHA10Q5JZY3 1008 aa25.18■■□□□ 1.62
PTBP1-209ENST00000586481 DNAJC5GQ8N7S2 189 aa25.18■■□□□ 1.62
PTBP1-209ENST00000586481 ZBTB12Q9Y330 459 aaPredicted RBP25.18■■□□□ 1.62
PTBP1-209ENST00000586481 ADAMTSL1Q8N6G6 1762 aa25.18■■□□□ 1.62
PTBP1-209ENST00000586481 PSMD14O00487 310 aa25.17■■□□□ 1.62
PTBP1-209ENST00000586481 MPHOSPH8Q99549 860 aa25.17■■□□□ 1.62
PTBP1-209ENST00000586481 PTPRCP08575 1304 aa25.16■■□□□ 1.62
PTBP1-209ENST00000586481 MYH3P11055 1940 aa25.16■■□□□ 1.62
PTBP1-209ENST00000586481 SHTN1A0MZ66 631 aa25.16■■□□□ 1.62
PTBP1-209ENST00000586481 ANKRD18BA2A2Z9 1011 aa25.16■■□□□ 1.62
PTBP1-209ENST00000586481 ATP2B4P23634 1241 aa25.16■■□□□ 1.62
PTBP1-209ENST00000586481 LMBR1LQ6UX01 489 aa25.16■■□□□ 1.62
PTBP1-209ENST00000586481 SPEF2Q9C093 1822 aa25.15■■□□□ 1.62
PTBP1-209ENST00000586481 ALDH1L2Q3SY69 923 aa25.15■■□□□ 1.62
PTBP1-209ENST00000586481 CNTROBQ8N137 903 aa25.15■■□□□ 1.62
PTBP1-209ENST00000586481 IFIT5Q13325 482 aaKnown RBP25.14■■□□□ 1.62
PTBP1-209ENST00000586481 ADARB2Q9NS39 739 aaKnown RBP25.14■■□□□ 1.62
PTBP1-209ENST00000586481 ITGBL1O95965 494 aaPredicted RBP25.13■■□□□ 1.61
PTBP1-209ENST00000586481 NBPF7P0C2Y1 421 aaPredicted RBP25.13■■□□□ 1.61
PTBP1-209ENST00000586481 CCT4P50991 539 aaKnown RBP25.13■■□□□ 1.61
PTBP1-209ENST00000586481 USP50Q70EL3 339 aaPredicted RBP25.13■■□□□ 1.61
PTBP1-209ENST00000586481 SUCLG2Q96I99 432 aa25.13■■□□□ 1.61
PTBP1-209ENST00000586481 CNOT7Q9UIV1 285 aaKnown RBP25.13■■□□□ 1.61
PTBP1-209ENST00000586481 HNRNPUQ00839 825 aaKnown RBP eCLIP25.12■■□□□ 1.61
PTBP1-209ENST00000586481 KLRG1Q96E93 195 aa25.12■■□□□ 1.61
PTBP1-209ENST00000586481 ZNF594Q96JF6 807 aaPredicted RBP25.12■■□□□ 1.61
PTBP1-209ENST00000586481 PASKQ96RG2 1323 aa25.12■■□□□ 1.61
PTBP1-209ENST00000586481 MICALL2Q8IY33 904 aa25.11■■□□□ 1.61
PTBP1-209ENST00000586481 CHRNDQ07001 517 aa25.1■■□□□ 1.61
PTBP1-209ENST00000586481 CCDC57Q2TAC2 916 aa25.1■■□□□ 1.61
PTBP1-209ENST00000586481 TAF7LQ5H9L4 462 aa25.1■■□□□ 1.61
PTBP1-209ENST00000586481 HELBQ8NG08 1087 aaPredicted RBP25.1■■□□□ 1.61
PTBP1-209ENST00000586481 TRPM4Q8TD43 1214 aa25.1■■□□□ 1.61
PTBP1-209ENST00000586481 ANKRD2Q9GZV1 360 aa25.1■■□□□ 1.61
PTBP1-209ENST00000586481 H7C1D1 291 aa25.09■■□□□ 1.61
PTBP1-209ENST00000586481 TAF5LO75529 589 aa25.09■■□□□ 1.61
PTBP1-209ENST00000586481 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
PTBP1-209ENST00000586481 KCNJ4P48050 445 aa25.09■■□□□ 1.61
PTBP1-209ENST00000586481 FMR1Q06787 632 aaKnown RBP eCLIP25.09■■□□□ 1.612e-7■■□□□ 12.6
PTBP1-209ENST00000586481 NOB1Q9ULX3 412 aaKnown RBP25.09■■□□□ 1.61
PTBP1-209ENST00000586481 SNAP23O00161 211 aa25.08■■□□□ 1.61
PTBP1-209ENST00000586481 KLRK1P26718 216 aa25.08■■□□□ 1.61
PTBP1-209ENST00000586481 RBM26Q5T8P6 1007 aaKnown RBP25.08■■□□□ 1.61
PTBP1-209ENST00000586481 SAMD7Q7Z3H4 446 aa25.08■■□□□ 1.61
PTBP1-209ENST00000586481 TXNRD3Q86VQ6 643 aa25.08■■□□□ 1.61
PTBP1-209ENST00000586481 KAZALD1Q96I82 304 aa25.08■■□□□ 1.61
PTBP1-209ENST00000586481 LEMD3Q9Y2U8 911 aa25.08■■□□□ 1.61
PTBP1-209ENST00000586481 ZNF804BA4D1E1 1349 aa25.08■■□□□ 1.6
PTBP1-209ENST00000586481 MED23Q9ULK4 1368 aa25.07■■□□□ 1.6
PTBP1-209ENST00000586481 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
PTBP1-209ENST00000586481 FBXW7Q969H0 707 aa25.07■■□□□ 1.6
PTBP1-209ENST00000586481 CREBZFQ9NS37 354 aa25.07■■□□□ 1.6
PTBP1-209ENST00000586481 TRAF5O00463 557 aa25.06■■□□□ 1.6
PTBP1-209ENST00000586481 PLIN1O60240 522 aa25.06■■□□□ 1.6
PTBP1-209ENST00000586481 RARSP54136 660 aaKnown RBP25.06■■□□□ 1.6
PTBP1-209ENST00000586481 TBC1D10BQ4KMP7 808 aaPredicted RBP25.06■■□□□ 1.6
PTBP1-209ENST00000586481 DPF2Q92785 391 aa25.06■■□□□ 1.6
PTBP1-209ENST00000586481 BICC1Q9H694 974 aaKnown RBP25.06■■□□□ 1.6
PTBP1-209ENST00000586481 CNNM1Q9NRU3 951 aa25.06■■□□□ 1.6
PTBP1-209ENST00000586481 MKRN1Q9UHC7 482 aaKnown RBP25.06■■□□□ 1.6
PTBP1-209ENST00000586481 UTYO14607 1347 aa25.06■■□□□ 1.6
PTBP1-209ENST00000586481 VIL1P09327 827 aaKnown RBP25.05■■□□□ 1.6
PTBP1-209ENST00000586481 LDHAL6AQ6ZMR3 332 aa25.05■■□□□ 1.6
PTBP1-209ENST00000586481 TMEM88BA6NKF7 163 aa25.04■■□□□ 1.6
PTBP1-209ENST00000586481 EGFRP00533 1210 aa25.04■■□□□ 1.6
PTBP1-209ENST00000586481 RPS12P25398 132 aaKnown RBP25.04■■□□□ 1.6
PTBP1-209ENST00000586481 PODNQ7Z5L7 613 aa25.04■■□□□ 1.6
PTBP1-209ENST00000586481 USP44Q9H0E7 712 aa25.04■■□□□ 1.6
PTBP1-209ENST00000586481 USP17L3A6NCW0 530 aa25.03■■□□□ 1.6
PTBP1-209ENST00000586481 USP17L4A6NCW7 530 aa25.03■■□□□ 1.6
PTBP1-209ENST00000586481 RSBN1LQ6PCB5 846 aaPredicted RBP25.03■■□□□ 1.6
PTBP1-209ENST00000586481 USP17L1Q7RTZ2 530 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms