RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 TMEM63CQ9P1W3 806 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 SIN3BO75182 1162 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 MAP3K6O95382 1288 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 ADH6P28332 368 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 CHRNA4P43681 627 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 DOC2BQ14184 412 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 TMC1Q8TDI8 760 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 ASB16Q96NS5 453 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 SUV39H2Q9H5I1 410 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 GGA1Q9UJY5 639 aa4.42□□□□□ -1.7
RPRD1A-204ENST00000585953 NEURL1BA8MQ27 555 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 MMP20O60882 483 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 HOXB4P17483 251 aaPredicted RBP4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 DNAJC14Q6Y2X3 702 aaPredicted RBP4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 SLCO4C1Q6ZQN7 724 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 NBPF11Q86T75 865 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 FCHSD1Q86WN1 690 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 DMRTB1Q96MA1 342 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 ABI2Q9NYB9 513 aaPredicted RBP4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 TNFRSF21O75509 655 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 ZSCAN29Q8IWY8 852 aaPredicted RBP4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 TNFRSF25Q93038 417 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 MDFIQ99750 246 aa4.41□□□□□ -1.7
RPRD1A-204ENST00000585953 TREHO43280 583 aa4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 C1orf229Q6ZS94 237 aaPredicted RBP4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 DHX32Q7L7V1 743 aaKnown RBP4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 OR13H1Q8NG92 308 aa4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 SNX29Q8TEQ0 813 aa4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 ALKBH8Q96BT7 664 aaKnown RBP4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 TLR7Q9NYK1 1049 aaKnown RBP4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 FOXD3Q9UJU5 478 aaPredicted RBP4.4□□□□□ -1.7
RPRD1A-204ENST00000585953 AMPD1P23109 780 aa4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 SOX18P35713 384 aa4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 GATA4P43694 442 aa4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 MFAP1P55081 439 aaKnown RBP4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 TTC39BQ5VTQ0 682 aaPredicted RBP4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 UBE2OQ9C0C9 1292 aaKnown RBP4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 CHRDQ9H2X0 955 aa4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 CNTN3Q9P232 1028 aa4.4□□□□□ -1.71
RPRD1A-204ENST00000585953 ANKRD33BA6NCL7 494 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 ADARB2-AS1A8MUL3 147 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 CYP2E1P05181 493 aaPredicted RBP4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 PSAPP07602 524 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 EPXP11678 715 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 HOXD8P13378 290 aaPredicted RBP4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 ADH7P40394 386 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 GPLD1P80108 840 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 TBC1D8BQ0IIM8 1120 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 ORC1Q13415 861 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 DSC3Q14574 896 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 FOXD4L6Q3SYB3 417 aaPredicted RBP4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 FOXD4L3Q6VB84 417 aaPredicted RBP4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 C1orf127Q8N9H9 656 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 NIF3L1Q9GZT8 377 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 IGFLR1Q9H665 355 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 DNAJB12Q9NXW2 375 aaKnown RBP4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 PHACTR2O75167 634 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 NRLP54845 237 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 PLAURQ03405 335 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 TRPM4Q8TD43 1214 aa4.39□□□□□ -1.71
RPRD1A-204ENST00000585953 ELOA3CA0A087WX78 387 aaPredicted RBP4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 ELOA3DA6NLF2 546 aaPredicted RBP4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 ZBTB42B2RXF5 422 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 MLLT1Q03111 559 aaPredicted RBP4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 FMR1Q06787 632 aaKnown RBP eCLIP4.38□□□□□ -1.716e-18■■■■■ 62.8
RPRD1A-204ENST00000585953 RSPO4Q2I0M5 234 aaPredicted RBP4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 ELOA3BQ3SY89 546 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 NPAS4Q8IUM7 802 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 ELOA3Q8NG57 546 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 NSUN5Q96P11 429 aaKnown RBP4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 PODXL2Q9NZ53 605 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 KANSL3Q9P2N6 904 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 SLC6A14Q9UN76 642 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 EREGO14944 169 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 CES1P23141 567 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 NKAPLQ5M9Q1 402 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 COL13A1Q5TAT6 717 aaPredicted RBP4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 NAGPAQ9UK23 515 aa4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.38□□□□□ -1.71
RPRD1A-204ENST00000585953 EIF1AYO14602 144 aaKnown RBP4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 KIF4AO95239 1232 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 NEFLP07196 543 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 P4HBP07237 508 aaKnown RBP4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 DGKGP49619 791 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 PLCB3Q01970 1234 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 PCSK7Q16549 785 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 USPL1Q5W0Q7 1092 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 BTBD6Q96KE9 485 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 ZFYVE28Q9HCC9 887 aa4.37□□□□□ -1.71
RPRD1A-204ENST00000585953 ERCC3P19447 782 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 HYAL2Q12891 473 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 HFE2Q6ZVN8 426 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 PMEPA1Q969W9 287 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 CSRNP1Q96S65 589 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 DNAJC25Q9H1X3 360 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 AMOTL2Q9Y2J4 779 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 LOC102724428A0A0B4J2F2 783 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 J3QW42 95 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 CPNE3O75131 537 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms