RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CEP57Q86XR8 500 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 FAM135AQ9P2D6 1515 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 CCDC114Q96M63 670 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 IQCGQ9H095 443 aaKnown RBP14.84□□□□□ -0.03
RNF43-208ENST00000584437 TMOD3Q9NYL9 352 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 TRMT112Q9UI30 125 aaKnown RBP14.84□□□□□ -0.03
RNF43-208ENST00000584437 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 PI4KAP2A4QPH2 592 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 ATP8B2P98198 1209 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 MCMDC2Q4G0Z9 681 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 PI4KAP1Q8N8J0 262 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 CCDC42Q96M95 316 aa14.84□□□□□ -0.03
RNF43-208ENST00000584437 PTCD1O75127 700 aaKnown RBP14.83□□□□□ -0.03
RNF43-208ENST00000584437 LDHCP07864 332 aa14.83□□□□□ -0.03
RNF43-208ENST00000584437 Q6ZUG5 572 aa14.83□□□□□ -0.03
RNF43-208ENST00000584437 MEIS3Q99687 375 aa14.83□□□□□ -0.03
RNF43-208ENST00000584437 PCF11O94913 1555 aaKnown RBP14.83□□□□□ -0.03
RNF43-208ENST00000584437 TSPY2A6NKD2 308 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 A6NNZ2 444 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 TBCAO75347 108 aaKnown RBP14.83□□□□□ -0.04
RNF43-208ENST00000584437 TUBB8Q3ZCM7 444 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 C10orf67Q8IYJ2 551 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 CWC25Q9NXE8 425 aaPredicted RBP14.83□□□□□ -0.04
RNF43-208ENST00000584437 DISP3Q9P2K9 1392 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 GBP6Q6ZN66 633 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 CPLX4Q7Z7G2 160 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 SYCP3Q8IZU3 236 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 ERMNQ8TAM6 284 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 RSRC1Q96IZ7 334 aaKnown RBP14.83□□□□□ -0.04
RNF43-208ENST00000584437 IFNKQ9P0W0 207 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
RNF43-208ENST00000584437 TTC41PQ6P2S7 1318 aa14.83□□□□□ -0.04
RNF43-208ENST00000584437 ZNF569Q5MCW4 686 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 BRAPQ7Z569 592 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 CNGA4Q8IV77 575 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 DRC1Q96MC2 740 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 SMC6Q96SB8 1091 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 ATP2A1O14983 1001 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 RTN1Q16799 776 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 B4GALNT4Q76KP1 1039 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 DAAM2Q86T65 1068 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 LDHAL6AQ6ZMR3 332 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 USP37Q86T82 979 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 ANKLE2Q86XL3 938 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 MRPL50Q8N5N7 158 aaKnown RBP14.82□□□□□ -0.04
RNF43-208ENST00000584437 DCTPP1Q9H773 170 aa14.82□□□□□ -0.04
RNF43-208ENST00000584437 BICDL2A1A5D9 508 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 EVCP57679 992 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
RNF43-208ENST00000584437 MXRA7P84157 204 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 TRIM75PA6NK02 468 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 TNNC1P63316 161 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 CCDC174Q6PII3 467 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 WAPLQ7Z5K2 1190 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 MYRIPQ8NFW9 859 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 SNRKQ9NRH2 765 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 WASLO00401 505 aaPredicted RBP14.81□□□□□ -0.04
RNF43-208ENST00000584437 ALDH1L1O75891 902 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 GNAQP50148 359 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 HSP90AA4PQ58FG1 418 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 BICDL1Q6ZP65 573 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 SAMD15Q9P1V8 674 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 MARCKSP29966 332 aaPredicted RBP14.81□□□□□ -0.04
RNF43-208ENST00000584437 AK2P54819 239 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 PPP2R3AQ06190 1150 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 CFAP58Q5T655 872 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 PUF60Q9UHX1 559 aaKnown RBP14.81□□□□□ -0.04
RNF43-208ENST00000584437 ASXL1Q8IXJ9 1541 aa14.81□□□□□ -0.04
RNF43-208ENST00000584437 KARSQ15046 597 aaKnown RBP14.8□□□□□ -0.04
RNF43-208ENST00000584437 RAB11FIP4Q86YS3 637 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 GUCA1BQ9UMX6 200 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 CEP83Q9Y592 693 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 ZEB2O60315 1214 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 UBE3BQ7Z3V4 1068 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 ESR2Q92731 530 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 TSGA10Q9BZW7 698 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 LZTFL1Q9NQ48 299 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 A0A1B0GUA9 196 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 BAG3O95817 575 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 RHOXF2BP0C7M4 288 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 DDX46Q7L014 1031 aaKnown RBP14.8□□□□□ -0.04
RNF43-208ENST00000584437 CCDC97Q96F63 343 aaPredicted RBP14.8□□□□□ -0.04
RNF43-208ENST00000584437 RHOXF2Q9BQY4 288 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 TEX13AQ9BXU3 409 aaPredicted RBP14.8□□□□□ -0.04
RNF43-208ENST00000584437 RRAGDQ9NQL2 400 aaPredicted RBP14.8□□□□□ -0.04
RNF43-208ENST00000584437 PHACTR2O75167 634 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 MYL5Q02045 173 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 RAD50Q92878 1312 aa14.8□□□□□ -0.04
RNF43-208ENST00000584437 PAIP2Q9BPZ3 127 aaKnown RBP14.79□□□□□ -0.04
RNF43-208ENST00000584437 SELENOSQ9BQE4 189 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 IFT140Q96RY7 1462 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 PPFIA3O75145 1194 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 ZBTB16Q05516 673 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 ZGPATQ8N5A5 531 aaKnown RBP14.79□□□□□ -0.04
RNF43-208ENST00000584437 TCEANC2Q96MN5 208 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 BAG1Q99933 345 aaPredicted RBP14.79□□□□□ -0.04
RNF43-208ENST00000584437 MMRN2Q9H8L6 949 aa14.79□□□□□ -0.04
RNF43-208ENST00000584437 LUC7L2Q9Y383 392 aaKnown RBP14.79□□□□□ -0.04
RNF43-208ENST00000584437 PARD3Q8TEW0 1356 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms