RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
CCDC144NL-AS1-218ENST00000583962 ALKQ9UM73 1620 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 KIF4AO95239 1232 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 VIRMAQ69YN4 1812 aaKnown RBP12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SPDL1Q96EA4 605 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 UBXN4Q92575 508 aa12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 IQSEC3Q9UPP2 1182 aaPredicted RBP12.89□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ROBO2Q9HCK4 1378 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 MBD3O95983 291 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 BRINP3Q76B58 766 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 LMCD1Q9NZU5 365 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 DCCP43146 1447 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 RHBDL3P58872 404 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 WAPLQ7Z5K2 1190 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.353e-14■■■■■ 47.1
CCDC144NL-AS1-218ENST00000583962 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 RPSAP08865 295 aaKnown RBP12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 NEXNQ0ZGT2 675 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 GBP2P32456 591 aaPredicted RBP12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SAFB2Q14151 953 aaKnown RBP eCLIP12.87□□□□□ -0.353e-7■■■□□ 15.7
CCDC144NL-AS1-218ENST00000583962 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PTCH1Q13635 1447 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PYGBP11216 843 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 MAGEA8P43361 318 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 MCM6Q14566 821 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 APBB1IPQ7Z5R6 666 aaPredicted RBP12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SAAL1Q96ER3 474 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 FAM53CQ9NYF3 392 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 JCADQ9P266 1359 aa12.87□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PHACTR2O75167 634 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 CAVIN2O95810 425 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 EXOC4Q96A65 974 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 IQCGQ9H095 443 aaKnown RBP12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PDE3AQ14432 1141 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 XIRP1Q702N8 1843 aaKnown RBP12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 KAT2BQ92831 832 aa12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SMAPO00193 183 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PECAM1P16284 738 aaPredicted RBP12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 CDR1P51861 262 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 CRYMQ14894 314 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 IQCA1Q86XH1 822 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SHTN1A0MZ66 631 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 LAMB3Q13751 1172 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 RRP12Q5JTH9 1297 aaKnown RBP12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 LRRC59Q96AG4 307 aaKnown RBP12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ACBD3Q9H3P7 528 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 TRAK1Q9UPV9 953 aa12.85□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 APAF1O14727 1248 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PIK3C2GO75747 1445 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 TMEM110Q86TL2 294 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 REXO1L1PQ8IX06 675 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 LNPKQ9C0E8 428 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PPLO60437 1756 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 NUTM2BA6NNL0 878 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 NUTM2EB1AL46 878 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ACTN3Q08043 901 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 THEMIS2Q5TEJ8 643 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 CDC37L1Q7L3B6 337 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 SAPCD2Q86UD0 394 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 NUTM2AQ8IVF1 878 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 B4GALNT2Q8NHY0 566 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 FRMD4BQ9Y2L6 1034 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 CCDC178Q5BJE1 867 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 TMC6Q7Z403 805 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 DRAXINQ8NBI3 349 aaPredicted RBP12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 TSGA10Q9BZW7 698 aa12.84□□□□□ -0.35
CCDC144NL-AS1-218ENST00000583962 PHACTR1Q9C0D0 580 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms