RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 CEP126Q9P2H0 1117 aa11.32□□□□□ -0.6
CDK5RAP3-220ENST00000581160 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
CDK5RAP3-220ENST00000581160 APBB1O00213 710 aa11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 TFCP2Q12800 502 aa11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 TTLL6Q8N841 843 aa11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 ANKRD2Q9GZV1 360 aa11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 GPR108Q9NPR9 543 aa11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 TAF1P21675 1872 aa11.31□□□□□ -0.6
CDK5RAP3-220ENST00000581160 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 SMARCA5O60264 1052 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 PDE8BO95263 885 aa11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 CHRNDQ07001 517 aa11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 METTL24Q5JXM2 366 aa11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 CHD1LQ86WJ1 897 aa11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 VGLL2Q8N8G2 317 aa11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 ATP6V0A2Q9Y487 856 aa11.3□□□□□ -0.6
CDK5RAP3-220ENST00000581160 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
CDK5RAP3-220ENST00000581160 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
CDK5RAP3-220ENST00000581160 CLASRPQ8N2M8 674 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-220ENST00000581160 TMX4Q9H1E5 349 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-220ENST00000581160 AKAP2Q9Y2D5 859 aa11.29□□□□□ -0.6
CDK5RAP3-220ENST00000581160 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-220ENST00000581160 COL4A1P02462 1669 aa11.29□□□□□ -0.6
CDK5RAP3-220ENST00000581160 FGFR2P21802 821 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 PRPF40BQ6NWY9 871 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 C16orf71Q8IYS4 520 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 EAF2Q96CJ1 260 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 LNPKQ9C0E8 428 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 IL1RAPL2Q9NP60 686 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 LEMD3Q9Y2U8 911 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 COL11A2P13942 1736 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-220ENST00000581160 TAF5LO75529 589 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 TIMM10P62072 90 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 GPSM2P81274 684 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 UBE4AQ14139 1066 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 NLGN2Q8NFZ4 835 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 LPIN2Q92539 896 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 XDHP47989 1333 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 LRP5O75197 1615 aa11.27□□□□□ -0.61
CDK5RAP3-220ENST00000581160 KIAA1551Q9HCM1 1747 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 A0A1B0GUL7 405 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 PDE4AP27815 886 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 PUM3Q15397 648 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 ATP2B3Q16720 1220 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 AACSQ86V21 672 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 MPNDQ8N594 471 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 NEUROD6Q96NK8 337 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 CCDC8Q9H0W5 538 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 ANKIB1Q9P2G1 1089 aa11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 NSFL1CQ9UNZ2 370 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-220ENST00000581160 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 C21orf2O43822 256 aa11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 IFIT1P09914 478 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 SLC5A1P13866 664 aa11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 GGA1Q9UJY5 639 aa11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 ZNF804BA4D1E1 1349 aa11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
CDK5RAP3-220ENST00000581160 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 SNAP23O00161 211 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 KCNJ4P48050 445 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 DPP8Q6V1X1 898 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 C15orf52Q6ZUT6 534 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 SLC51AQ86UW1 340 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 PLEKHM2Q8IWE5 1019 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 RTKN2Q8IZC4 609 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 TBC1D16Q8TBP0 767 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 OSBPL3Q9H4L5 887 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 STAP2Q9UGK3 403 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 POLLQ9UGP5 575 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 SALL3Q9BXA9 1300 aa11.24□□□□□ -0.61
CDK5RAP3-220ENST00000581160 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
CDK5RAP3-220ENST00000581160 OTUD7AQ8TE49 926 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-220ENST00000581160 ECHDC1Q9NTX5 307 aa11.23□□□□□ -0.61
CDK5RAP3-220ENST00000581160 DBNLQ9UJU6 430 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-220ENST00000581160 BCS1LQ9Y276 419 aa11.23□□□□□ -0.61
CDK5RAP3-220ENST00000581160 LRRC37AA6NMS7 1700 aa11.22□□□□□ -0.61
CDK5RAP3-220ENST00000581160 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
CDK5RAP3-220ENST00000581160 ZNF609O15014 1411 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms