RNA–Protein interactions for RNA: ENST00000579815.1

CLTC-211, Transcript of clathrin heavy chain, humanhuman

TSL 5

Gene CLTC, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-211ENST00000579815 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L12C9JPN9 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L21D6R901 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 M0R2N6 131 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 PPP1R12BO60237 982 aaPredicted RBP8.54□□□□□ -1.04
CLTC-211ENST00000579815 ITGB2P05107 769 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 PSMA6P60900 246 aaKnown RBP8.54□□□□□ -1.04
CLTC-211ENST00000579815 HNRNPUQ00839 825 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLTC-211ENST00000579815 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 SLCO4C1Q6ZQN7 724 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 FCHSD1Q86WN1 690 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 SCARF2Q96GP6 870 aaPredicted RBP8.54□□□□□ -1.04
CLTC-211ENST00000579815 PHACTR1Q9C0D0 580 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 ENAMQ9NRM1 1142 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 LMTK2Q8IWU2 1503 aa8.54□□□□□ -1.04
CLTC-211ENST00000579815 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 ZNF518AQ6AHZ1 1483 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 RNF225M0QZC1 329 aaPredicted RBP8.53□□□□□ -1.04
CLTC-211ENST00000579815 PCBP4P57723 403 aaKnown RBP8.53□□□□□ -1.04
CLTC-211ENST00000579815 SFSWAPQ12872 951 aaKnown RBP8.53□□□□□ -1.04
CLTC-211ENST00000579815 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
CLTC-211ENST00000579815 SAMD5Q5TGI4 173 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 RHPN1Q8TCX5 695 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 DCAF11Q8TEB1 546 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 SCG3Q8WXD2 468 aaKnown RBP8.53□□□□□ -1.04
CLTC-211ENST00000579815 ARXQ96QS3 562 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 MRS2Q9HD23 443 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 GJA3Q9Y6H8 435 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 ZMYM4Q5VZL5 1548 aa8.53□□□□□ -1.04
CLTC-211ENST00000579815 ARAFP10398 606 aa8.52□□□□□ -1.05
CLTC-211ENST00000579815 HIRAP54198 1017 aaPredicted RBP8.52□□□□□ -1.05
CLTC-211ENST00000579815 SEC13P55735 322 aa8.52□□□□□ -1.05
CLTC-211ENST00000579815 GOLGA6L1Q8N7Z2 621 aa8.52□□□□□ -1.05
CLTC-211ENST00000579815 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
CLTC-211ENST00000579815 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
CLTC-211ENST00000579815 ASXL2Q76L83 1435 aa8.52□□□□□ -1.05
CLTC-211ENST00000579815 SCAPERQ9BY12 1400 aa8.52□□□□□ -1.05
CLTC-211ENST00000579815 CLTCL1P53675 1640 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 MROH1Q8NDA8 1641 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 BRD4O60885 1362 aaPredicted RBP8.51□□□□□ -1.05
CLTC-211ENST00000579815 INSRP06213 1382 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 EFCAB6Q5THR3 1501 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 EPXP11678 715 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 RALBP1Q15311 655 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 LARP1Q6PKG0 1096 aaKnown RBP8.51□□□□□ -1.05
CLTC-211ENST00000579815 NGLY1Q96IV0 654 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 SLC30A3Q99726 388 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 C2orf49Q9BVC5 232 aaPredicted RBP8.51□□□□□ -1.05
CLTC-211ENST00000579815 WASHC2CQ9Y4E1 1318 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 MYOM2P54296 1465 aa8.51□□□□□ -1.05
CLTC-211ENST00000579815 KIDINS220Q9ULH0 1771 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 ATAD2Q6PL18 1390 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 RFX1P22670 979 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 FAM182BQ5T319 152 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 ANKMY2Q8IV38 441 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 SUV39H2Q9H5I1 410 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 KIF1BO60333 1816 aa8.5□□□□□ -1.05
CLTC-211ENST00000579815 IFT172Q9UG01 1749 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 HECW2Q9P2P5 1572 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 ST20-MTHFSA0A0A6YYL1 179 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 COL8A1P27658 744 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 KANK3Q6NY19 840 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 LINC00114Q6XXX2 140 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 RAB44Q7Z6P3 723 aaPredicted RBP8.49□□□□□ -1.05
CLTC-211ENST00000579815 BTBD6Q96KE9 485 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 SUSD3Q96L08 255 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 VRTNQ9H8Y1 702 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 RRAGCQ9HB90 399 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 MARK1Q9P0L2 795 aa8.49□□□□□ -1.05
CLTC-211ENST00000579815 MYBBP1AQ9BQG0 1328 aaKnown RBP8.49□□□□□ -1.05
CLTC-211ENST00000579815 SYNMO15061 1565 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 SMG6Q86US8 1419 aaKnown RBP8.48□□□□□ -1.05
CLTC-211ENST00000579815 FAM196BA6NMK8 535 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
CLTC-211ENST00000579815 C1orf53Q5VUE5 145 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 GPAT2Q6NUI2 795 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 BEND7Q8N7W2 519 aaPredicted RBP8.48□□□□□ -1.05
CLTC-211ENST00000579815 HINFPQ9BQA5 517 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 MLH3Q9UHC1 1453 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 LRPPRCP42704 1394 aaKnown RBP8.48□□□□□ -1.05
CLTC-211ENST00000579815 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
CLTC-211ENST00000579815 PARD3Q8TEW0 1356 aa8.48□□□□□ -1.05
CLTC-211ENST00000579815 MAP3K4Q9Y6R4 1608 aa8.47□□□□□ -1.05
CLTC-211ENST00000579815 POGZQ7Z3K3 1410 aa8.47□□□□□ -1.05
CLTC-211ENST00000579815 NEO1Q92859 1461 aa8.47□□□□□ -1.05
CLTC-211ENST00000579815 SCAF11Q99590 1463 aaKnown RBP8.47□□□□□ -1.05
CLTC-211ENST00000579815 AMPD1P23109 780 aa8.47□□□□□ -1.05
CLTC-211ENST00000579815 TYRO3Q06418 890 aa8.47□□□□□ -1.05
CLTC-211ENST00000579815 BCS1LQ9Y276 419 aa8.47□□□□□ -1.05
CLTC-211ENST00000579815 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
CLTC-211ENST00000579815 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.05
CLTC-211ENST00000579815 ADH6P28332 368 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms