RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 DDX58O95786 925 aaKnown RBP13.05□□□□□ -0.32
CTC1-204ENST00000578441 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
CTC1-204ENST00000578441 GPSM2P81274 684 aa13.05□□□□□ -0.32
CTC1-204ENST00000578441 GRM1Q13255 1194 aa13.05□□□□□ -0.32
CTC1-204ENST00000578441 DGKZQ13574 1117 aa13.05□□□□□ -0.32
CTC1-204ENST00000578441 CCDC152Q4G0S7 254 aa13.05□□□□□ -0.32
CTC1-204ENST00000578441 DBNDD1Q9H9R9 158 aa13.05□□□□□ -0.32
CTC1-204ENST00000578441 CASP8AP2Q9UKL3 1982 aa13.05□□□□□ -0.32
CTC1-204ENST00000578441 TNRC18O15417 2968 aaPredicted RBP13.04□□□□□ -0.32
CTC1-204ENST00000578441 PDE8AO60658 829 aa13.04□□□□□ -0.32
CTC1-204ENST00000578441 VIL1P09327 827 aaKnown RBP13.04□□□□□ -0.32
CTC1-204ENST00000578441 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
CTC1-204ENST00000578441 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
CTC1-204ENST00000578441 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
CTC1-204ENST00000578441 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
CTC1-204ENST00000578441 SAGE1Q9NXZ1 904 aa13.04□□□□□ -0.32
CTC1-204ENST00000578441 TSKSQ9UJT2 592 aa13.04□□□□□ -0.32
CTC1-204ENST00000578441 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
CTC1-204ENST00000578441 COL4A1P02462 1669 aa13.04□□□□□ -0.32
CTC1-204ENST00000578441 RTL9Q8NET4 1388 aa13.04□□□□□ -0.32
CTC1-204ENST00000578441 APAF1O14727 1248 aa13.03□□□□□ -0.32
CTC1-204ENST00000578441 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
CTC1-204ENST00000578441 PRPF38BQ5VTL8 546 aaKnown RBP13.03□□□□□ -0.32
CTC1-204ENST00000578441 AGBL3Q8NEM8 1001 aa13.03□□□□□ -0.32
CTC1-204ENST00000578441 METTL22Q9BUU2 404 aaPredicted RBP13.03□□□□□ -0.32
CTC1-204ENST00000578441 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
CTC1-204ENST00000578441 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
CTC1-204ENST00000578441 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
CTC1-204ENST00000578441 MYH3P11055 1940 aa13.02□□□□□ -0.32
CTC1-204ENST00000578441 SCN9AQ15858 1988 aa13.02□□□□□ -0.32
CTC1-204ENST00000578441 G3V3G9 751 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 HUNKP57058 714 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 SAMD7Q7Z3H4 446 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 USP48Q86UV5 1035 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 C2orf69Q8N8R5 385 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 CCDC102AQ96A19 550 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 MYD88Q99836 296 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
CTC1-204ENST00000578441 XDHP47989 1333 aa13.02□□□□□ -0.33
CTC1-204ENST00000578441 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
CTC1-204ENST00000578441 UFL1O94874 794 aa13.01□□□□□ -0.33
CTC1-204ENST00000578441 ZNF280AP59817 542 aaPredicted RBP13.01□□□□□ -0.33
CTC1-204ENST00000578441 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
CTC1-204ENST00000578441 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
CTC1-204ENST00000578441 TBC1D10BQ4KMP7 808 aaPredicted RBP13.01□□□□□ -0.33
CTC1-204ENST00000578441 RGMBQ6NW40 437 aa13.01□□□□□ -0.33
CTC1-204ENST00000578441 SULF1Q8IWU6 871 aa13.01□□□□□ -0.33
CTC1-204ENST00000578441 CDC5LQ99459 802 aaKnown RBP13.01□□□□□ -0.33
CTC1-204ENST00000578441 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
CTC1-204ENST00000578441 POLR2AP24928 1970 aaKnown RBP13.01□□□□□ -0.33
CTC1-204ENST00000578441 MMP14P50281 582 aa13□□□□□ -0.33
CTC1-204ENST00000578441 FKBP1BP68106 108 aa13□□□□□ -0.33
CTC1-204ENST00000578441 CCDC27Q2M243 656 aa13□□□□□ -0.33
CTC1-204ENST00000578441 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
CTC1-204ENST00000578441 KSR2Q6VAB6 950 aa13□□□□□ -0.33
CTC1-204ENST00000578441 PODNQ7Z5L7 613 aa13□□□□□ -0.33
CTC1-204ENST00000578441 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
CTC1-204ENST00000578441 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
CTC1-204ENST00000578441 ZNF428Q96B54 188 aa13□□□□□ -0.33
CTC1-204ENST00000578441 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
CTC1-204ENST00000578441 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
CTC1-204ENST00000578441 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
CTC1-204ENST00000578441 EGFRP00533 1210 aa12.99□□□□□ -0.33
CTC1-204ENST00000578441 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
CTC1-204ENST00000578441 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
CTC1-204ENST00000578441 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
CTC1-204ENST00000578441 C8orf58Q8NAV2 365 aa12.99□□□□□ -0.33
CTC1-204ENST00000578441 KCNQ5Q9NR82 932 aa12.99□□□□□ -0.33
CTC1-204ENST00000578441 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
CTC1-204ENST00000578441 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
CTC1-204ENST00000578441 CTSWP56202 376 aa12.98□□□□□ -0.33
CTC1-204ENST00000578441 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
CTC1-204ENST00000578441 BSDC1Q9NW68 430 aaPredicted RBP12.98□□□□□ -0.33
CTC1-204ENST00000578441 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
CTC1-204ENST00000578441 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
CTC1-204ENST00000578441 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
CTC1-204ENST00000578441 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
CTC1-204ENST00000578441 PAPPA2Q9BXP8 1791 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 MYO3BQ8WXR4 1341 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 USP17L3A6NCW0 530 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 USP17L4A6NCW7 530 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 ADM5C9JUS6 153 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
CTC1-204ENST00000578441 USP17L1Q7RTZ2 530 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 TTLL11Q8NHH1 800 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 GMLQ99445 158 aa12.97□□□□□ -0.33
CTC1-204ENST00000578441 IL16Q14005 1332 aa12.96□□□□□ -0.33
CTC1-204ENST00000578441 IGKV5-2P06315 115 aa12.96□□□□□ -0.33
CTC1-204ENST00000578441 SLC10A3P09131 477 aa12.96□□□□□ -0.33
CTC1-204ENST00000578441 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
CTC1-204ENST00000578441 MYOZ2Q9NPC6 264 aa12.96□□□□□ -0.33
CTC1-204ENST00000578441 ZNF646O15015 1829 aaPredicted RBP12.95□□□□□ -0.34
CTC1-204ENST00000578441 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
CTC1-204ENST00000578441 SCARF1Q14162 830 aa12.95□□□□□ -0.34
CTC1-204ENST00000578441 ANGEL2Q5VTE6 544 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms