RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, human

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD3-211	ENST00000575397	NOG	Q13253	232 aa		11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	DPP8	Q6V1X1	898 aa	Predicted RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	FTSJ3	Q8IY81	847 aa	Known RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	DZIP1L	Q8IYY4	767 aa	Known RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	FRAT1	Q92837	279 aa	Predicted RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	THUMPD2	Q9BTF0	503 aa	Known RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	CNOT7	Q9UIV1	285 aa	Known RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	TRIM35	Q9UPQ4	493 aa		11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	COG6	Q9Y2V7	657 aa		11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.95	□□□□□ -0.5
RFWD3-211	ENST00000575397	FAM155A	B1AL88	458 aa	Predicted RBP	11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	HTATSF1	O43719	755 aa	Known RBP	11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	EIF4A1	P60842	406 aa	Known RBP	11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	KIAA2012	Q0VF49	1180 aa		11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	SAMD7	Q7Z3H4	446 aa		11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	PPP1R42	Q7Z4L9	355 aa		11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	MPND	Q8N594	471 aa		11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	SUPT20H	Q8NEM7	779 aa		11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	PANK1	Q8TE04	598 aa		11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	ZC3H15	Q8WU90	426 aa	Known RBP	11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	VPS33B	Q9H267	617 aa		11.94	□□□□□ -0.5
RFWD3-211	ENST00000575397	LAMB2	P55268	1798 aa		11.93	□□□□□ -0.5
RFWD3-211	ENST00000575397	EGFR	P00533	1210 aa		11.93	□□□□□ -0.5
RFWD3-211	ENST00000575397	RIPK4	P57078	832 aa		11.93	□□□□□ -0.5
RFWD3-211	ENST00000575397	KIF23	Q02241	960 aa	Predicted RBP	11.93	□□□□□ -0.5
RFWD3-211	ENST00000575397	HDAC1	Q13547	482 aa	Predicted RBP	11.93	□□□□□ -0.5
RFWD3-211	ENST00000575397	MICALL2	Q8IY33	904 aa		11.93	□□□□□ -0.5
RFWD3-211	ENST00000575397	SMC4	Q9NTJ3	1288 aa		11.93	□□□□□ -0.5
RFWD3-211	ENST00000575397	DUOX1	Q9NRD9	1551 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	CDHR2	Q9BYE9	1310 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	DLG5	Q8TDM6	1919 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	ADM5	C9JUS6	153 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397		H7C1D1	291 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	TRPA1	O75762	1119 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	IGHD	P01880	384 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	ANXA1	P04083	346 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	HCLS1	P14317	486 aa	Predicted RBP	11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	TNIP1	Q15025	636 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	NFE2L2	Q16236	605 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	PARP10	Q53GL7	1025 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	RGMB	Q6NW40	437 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	ATF7IP	Q6VMQ6	1270 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	SP8	Q8IXZ3	490 aa		11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	UTP14A	Q9BVJ6	771 aa	Known RBP	11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	UPF2	Q9HAU5	1272 aa	Known RBP	11.92	□□□□□ -0.5
RFWD3-211	ENST00000575397	TAF1	P21675	1872 aa		11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	RGS3	P49796	1198 aa		11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	EXOSC9	Q06265	439 aa	Known RBP	11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	SLC10A5	Q5PT55	438 aa		11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	RBM26	Q5T8P6	1007 aa	Known RBP	11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	ARHGAP45	Q92619	1136 aa		11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	DBNDD1	Q9H9R9	158 aa		11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	GBA2	Q9HCG7	927 aa	Predicted RBP	11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	IFT57	Q9NWB7	429 aa		11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	RNF186	Q9NXI6	227 aa		11.91	□□□□□ -0.5
RFWD3-211	ENST00000575397	PSMD14	O00487	310 aa		11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	BBOX1	O75936	387 aa		11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	EIF2S2	P20042	333 aa	Known RBP	11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	ZNF157	P51786	506 aa	Predicted RBP	11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	GNAI1	P63096	354 aa		11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	PROSER3	Q2NL68	480 aa		11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	KRT26	Q7Z3Y9	468 aa		11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	LRP10	Q7Z4F1	713 aa		11.9	□□□□□ -0.5
RFWD3-211	ENST00000575397	RIMBP2	O15034	1052 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	RLBP1	P12271	317 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	GRAP	Q13588	217 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	BECN1	Q14457	450 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	PDIA6	Q15084	440 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	DDX46	Q7L014	1031 aa	Known RBP	11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	C2orf69	Q8N8R5	385 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	GRAPL	Q8TC17	118 aa	Predicted RBP	11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	KCNQ5	Q9NR82	932 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	SAGE1	Q9NXZ1	904 aa		11.89	□□□□□ -0.51
RFWD3-211	ENST00000575397	ASTN2	O75129	1339 aa	Predicted RBP	11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	ANKRD36C	Q5JPF3	1778 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	EIF5B	O60841	1220 aa	Known RBP	11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	TRIM27	P14373	513 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	AIMP1	Q12904	312 aa	Known RBP	11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	NLRP10	Q86W26	655 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	SSH1	Q8WYL5	1049 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	NECTIN2	Q92692	538 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	DPF2	Q92785	391 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	CCDC102A	Q96A19	550 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	DCPS	Q96C86	337 aa	Known RBP	11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	PCDHB15	Q9Y5E8	787 aa		11.88	□□□□□ -0.51
RFWD3-211	ENST00000575397	COL4A1	P02462	1669 aa		11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	LRRC37A	A6NMS7	1700 aa		11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	SLC10A3	P09131	477 aa		11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	DOK7	Q18PE1	504 aa		11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	WASHC4	Q2M389	1173 aa		11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	PRPF38B	Q5VTL8	546 aa	Known RBP	11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	TSR2	Q969E8	191 aa	Known RBP	11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	CSRNP1	Q96S65	589 aa		11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	TRMT112	Q9UI30	125 aa	Known RBP	11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.87	□□□□□ -0.51
RFWD3-211	ENST00000575397	ERBB4	Q15303	1308 aa		11.86	□□□□□ -0.51
RFWD3-211	ENST00000575397	COPS6	Q7L5N1	327 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms