RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 WDR90Q96KV7 1748 aa26.09■■□□□ 1.77
HCFC1R1-208ENST00000575214 XDHP47989 1333 aa26.09■■□□□ 1.77
HCFC1R1-208ENST00000575214 RIMBP2O15034 1052 aa26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 IPO8O15397 1037 aaKnown RBP26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 TOMM70O94826 608 aa26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 FRAT1Q92837 279 aaPredicted RBP26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 GPR101Q96P66 508 aaPredicted RBP26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 ZNRF3Q9ULT6 936 aa26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 MINPP1Q9UNW1 487 aa26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 GJA3Q9Y6H8 435 aa26.08■■□□□ 1.77
HCFC1R1-208ENST00000575214 POTECB2RU33 542 aa26.07■■□□□ 1.76
HCFC1R1-208ENST00000575214 CCDC57Q2TAC2 916 aa26.07■■□□□ 1.76
HCFC1R1-208ENST00000575214 GPC2Q8N158 579 aa26.07■■□□□ 1.76
HCFC1R1-208ENST00000575214 USP44Q9H0E7 712 aa26.07■■□□□ 1.76
HCFC1R1-208ENST00000575214 TAF7LQ5H9L4 462 aa26.07■■□□□ 1.76
HCFC1R1-208ENST00000575214 KAZALD1Q96I82 304 aa26.07■■□□□ 1.76
HCFC1R1-208ENST00000575214 L3MBTL3Q96JM7 780 aaPredicted RBP26.07■■□□□ 1.76
HCFC1R1-208ENST00000575214 LTBP1Q14766 1721 aa26.06■■□□□ 1.76
HCFC1R1-208ENST00000575214 ATP2B4P23634 1241 aa26.06■■□□□ 1.76
HCFC1R1-208ENST00000575214 BICC1Q9H694 974 aaKnown RBP26.06■■□□□ 1.76
HCFC1R1-208ENST00000575214 SPEF2Q9C093 1822 aa26.06■■□□□ 1.76
HCFC1R1-208ENST00000575214 IQCA1LA6NCM1 817 aa26.05■■□□□ 1.76
HCFC1R1-208ENST00000575214 ZC3H12CQ9C0D7 883 aaKnown RBP26.05■■□□□ 1.76
HCFC1R1-208ENST00000575214 ATF7IPQ6VMQ6 1270 aa26.04■■□□□ 1.76
HCFC1R1-208ENST00000575214 RBM46Q8TBY0 533 aaKnown RBP26.04■■□□□ 1.76
HCFC1R1-208ENST00000575214 DBNDD1Q9H9R9 158 aa26.04■■□□□ 1.76
HCFC1R1-208ENST00000575214 TRIM27P14373 513 aa26.03■■□□□ 1.76
HCFC1R1-208ENST00000575214 CXCL9Q07325 125 aa26.03■■□□□ 1.76
HCFC1R1-208ENST00000575214 G3V3G9 751 aa26.02■■□□□ 1.76
HCFC1R1-208ENST00000575214 RAD17O75943 681 aa26.02■■□□□ 1.76
HCFC1R1-208ENST00000575214 DOK7Q18PE1 504 aa26.02■■□□□ 1.76
HCFC1R1-208ENST00000575214 DCAF8Q5TAQ9 597 aa26.02■■□□□ 1.76
HCFC1R1-208ENST00000575214 ZNF594Q96JF6 807 aaPredicted RBP26.02■■□□□ 1.76
HCFC1R1-208ENST00000575214 ANKRD2Q9GZV1 360 aa26.02■■□□□ 1.76
HCFC1R1-208ENST00000575214 YDJCA8MPS7 323 aa26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 ECE2O60344 883 aa26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 UBTFL1P0CB47 393 aaPredicted RBP26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 CHRNDQ07001 517 aa26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 RABL6Q3YEC7 729 aaPredicted RBP26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 CIAPIN1Q6FI81 312 aa26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 ANKRD44Q8N8A2 993 aa26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 HACL1Q9UJ83 578 aa26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 TNNQ9UQP3 1299 aa26.01■■□□□ 1.75
HCFC1R1-208ENST00000575214 ZKSCAN2Q63HK3 967 aa26■■□□□ 1.75
HCFC1R1-208ENST00000575214 INTS3Q68E01 1043 aaKnown RBP26■■□□□ 1.75
HCFC1R1-208ENST00000575214 LDHAL6AQ6ZMR3 332 aa26■■□□□ 1.75
HCFC1R1-208ENST00000575214 CLUAP1Q96AJ1 413 aa26■■□□□ 1.75
HCFC1R1-208ENST00000575214 LMOD1P29536 600 aaPredicted RBP25.99■■□□□ 1.75
HCFC1R1-208ENST00000575214 TNIP1Q15025 636 aa25.99■■□□□ 1.75
HCFC1R1-208ENST00000575214 TAF1DQ9H5J8 278 aaPredicted RBP25.99■■□□□ 1.75
HCFC1R1-208ENST00000575214 CNNM1Q9NRU3 951 aa25.99■■□□□ 1.75
HCFC1R1-208ENST00000575214 LEMD3Q9Y2U8 911 aa25.99■■□□□ 1.75
HCFC1R1-208ENST00000575214 WTIPA6NIX2 430 aaPredicted RBP25.98■■□□□ 1.75
HCFC1R1-208ENST00000575214 KCNJ4P48050 445 aa25.98■■□□□ 1.75
HCFC1R1-208ENST00000575214 SMC1BQ8NDV3 1235 aa25.98■■□□□ 1.75
HCFC1R1-208ENST00000575214 MED23Q9ULK4 1368 aa25.97■■□□□ 1.75
HCFC1R1-208ENST00000575214 ZNF804BA4D1E1 1349 aa25.97■■□□□ 1.75
HCFC1R1-208ENST00000575214 EPHX2P34913 555 aa25.96■■□□□ 1.75
HCFC1R1-208ENST00000575214 SCNN1DP51172 638 aa25.96■■□□□ 1.75
HCFC1R1-208ENST00000575214 FSTL1Q12841 308 aa25.96■■□□□ 1.75
HCFC1R1-208ENST00000575214 HELBQ8NG08 1087 aaPredicted RBP25.96■■□□□ 1.75
HCFC1R1-208ENST00000575214 MEIS3Q99687 375 aa25.96■■□□□ 1.75
HCFC1R1-208ENST00000575214 HDAC5Q9UQL6 1122 aa25.96■■□□□ 1.75
HCFC1R1-208ENST00000575214 SCN4AP35499 1836 aa25.96■■□□□ 1.75
HCFC1R1-208ENST00000575214 EAPPQ56P03 285 aaPredicted RBP25.95■■□□□ 1.75
HCFC1R1-208ENST00000575214 TAF5LO75529 589 aa25.95■■□□□ 1.74
HCFC1R1-208ENST00000575214 GMPSP49915 693 aaPredicted RBP25.95■■□□□ 1.74
HCFC1R1-208ENST00000575214 CEP350Q5VT06 3117 aa25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 PSMD14O00487 310 aa25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 PLIN1O60240 522 aa25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 GNAI3P08754 354 aa25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 POTEIP0CG38 1075 aa25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 POTEJP0CG39 1038 aa25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 FTSJ3Q8IY81 847 aaKnown RBP25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 KCNQ5Q9NR82 932 aa25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 LRRFIP2Q9Y608 721 aaKnown RBP25.94■■□□□ 1.74
HCFC1R1-208ENST00000575214 EPS15P42566 896 aa25.93■■□□□ 1.74
HCFC1R1-208ENST00000575214 TMEM57Q8N5G2 664 aa25.93■■□□□ 1.74
HCFC1R1-208ENST00000575214 PUS3Q9BZE2 481 aaKnown RBP25.93■■□□□ 1.74
HCFC1R1-208ENST00000575214 HSPA6P17066 643 aa25.92■■□□□ 1.74
HCFC1R1-208ENST00000575214 PNMA8AQ86V59 439 aaPredicted RBP25.92■■□□□ 1.74
HCFC1R1-208ENST00000575214 GPRC5DQ9NZD1 345 aa25.92■■□□□ 1.74
HCFC1R1-208ENST00000575214 SNAP23O00161 211 aa25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 KLRK1P26718 216 aa25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 PODNQ7Z5L7 613 aa25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 TXNRD3Q86VQ6 643 aa25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 LDHDQ86WU2 507 aa25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 DZIP1LQ8IYY4 767 aaKnown RBP25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 KLHDC4Q8TBB5 520 aa25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 CLEC11AQ9Y240 323 aa25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 ZBTB12Q9Y330 459 aaPredicted RBP25.91■■□□□ 1.74
HCFC1R1-208ENST00000575214 CHADLQ6NUI6 762 aa25.9■■□□□ 1.74
HCFC1R1-208ENST00000575214 LRRC24Q50LG9 513 aa25.89■■□□□ 1.74
HCFC1R1-208ENST00000575214 COA1Q9GZY4 146 aa25.89■■□□□ 1.74
HCFC1R1-208ENST00000575214 RIPOR2Q9Y4F9 1068 aa25.89■■□□□ 1.74
HCFC1R1-208ENST00000575214 MROH5Q6ZUA9 1318 aa25.89■■□□□ 1.73
HCFC1R1-208ENST00000575214 ADARB2Q9NS39 739 aaKnown RBP25.88■■□□□ 1.73
HCFC1R1-208ENST00000575214 RFX5P48382 616 aaPredicted RBP25.87■■□□□ 1.73
HCFC1R1-208ENST00000575214 METTL24Q5JXM2 366 aa25.87■■□□□ 1.73
HCFC1R1-208ENST00000575214 CNOT7Q9UIV1 285 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms