RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SBF1O95248 1867 aa18.04■□□□□ 0.48
NPLOC4-209ENST00000572760 RFX5P48382 616 aaPredicted RBP18.04■□□□□ 0.48
NPLOC4-209ENST00000572760 AAMPQ13685 434 aa18.04■□□□□ 0.48
NPLOC4-209ENST00000572760 DPP8Q6V1X1 898 aaPredicted RBP18.04■□□□□ 0.48
NPLOC4-209ENST00000572760 SIL1Q9H173 461 aa18.04■□□□□ 0.48
NPLOC4-209ENST00000572760 CHD4Q14839 1912 aa18.04■□□□□ 0.48
NPLOC4-209ENST00000572760 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
NPLOC4-209ENST00000572760 ANKRD2Q9GZV1 360 aa18.03■□□□□ 0.48
NPLOC4-209ENST00000572760 COPRSQ9NQ92 184 aa18.03■□□□□ 0.48
NPLOC4-209ENST00000572760 MINPP1Q9UNW1 487 aa18.03■□□□□ 0.48
NPLOC4-209ENST00000572760 PA2G4Q9UQ80 394 aaKnown RBP18.03■□□□□ 0.48
NPLOC4-209ENST00000572760 A0A1B0GUL6 1792 aa18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 EYA2O00167 538 aa18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 GPSM2P81274 684 aa18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 G3BP1Q13283 466 aaKnown RBP eCLIP18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 OS9Q13438 667 aaPredicted RBP18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 SUPT20HQ8NEM7 779 aa18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 SSH3Q8TE77 659 aa18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 PUS3Q9BZE2 481 aaKnown RBP18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 TAOK3Q9H2K8 898 aa18.02■□□□□ 0.48
NPLOC4-209ENST00000572760 XDHP47989 1333 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 C6orf229H3BNL8 230 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 KCNJ4P48050 445 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 CHRNDQ07001 517 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 POLA2Q14181 598 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 LRRC24Q50LG9 513 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 SLC51AQ86UW1 340 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
NPLOC4-209ENST00000572760 MROH5Q6ZUA9 1318 aa18■□□□□ 0.47
NPLOC4-209ENST00000572760 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
NPLOC4-209ENST00000572760 HELBQ8NG08 1087 aaPredicted RBP18■□□□□ 0.47
NPLOC4-209ENST00000572760 GGA1Q9UJY5 639 aa18■□□□□ 0.47
NPLOC4-209ENST00000572760 SRCAPQ6ZRS2 3230 aa18■□□□□ 0.47
NPLOC4-209ENST00000572760 DICER1Q9UPY3 1922 aaKnown RBP18■□□□□ 0.47
NPLOC4-209ENST00000572760 CIAO1O76071 339 aa17.99■□□□□ 0.47
NPLOC4-209ENST00000572760 UFL1O94874 794 aa17.99■□□□□ 0.47
NPLOC4-209ENST00000572760 ATP2B4P23634 1241 aa17.99■□□□□ 0.47
NPLOC4-209ENST00000572760 IL15P40933 162 aaPredicted RBP17.99■□□□□ 0.47
NPLOC4-209ENST00000572760 RASSF7Q02833 373 aa17.99■□□□□ 0.47
NPLOC4-209ENST00000572760 RIPOR2Q9Y4F9 1068 aa17.99■□□□□ 0.47
NPLOC4-209ENST00000572760 NFKBIEO00221 500 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 TAF5LO75529 589 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 PSMD1Q99460 953 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 EYA3Q99504 573 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 PODXL2Q9NZ53 605 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 LEMD3Q9Y2U8 911 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 LTBP3Q9NS15 1303 aa17.98■□□□□ 0.47
NPLOC4-209ENST00000572760 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
NPLOC4-209ENST00000572760 TBC1D16Q8TBP0 767 aa17.97■□□□□ 0.47
NPLOC4-209ENST00000572760 ZNF277Q9NRM2 450 aaPredicted RBP17.97■□□□□ 0.47
NPLOC4-209ENST00000572760 LTBP1Q14766 1721 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 G3V3G9 751 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 RIMBP2O15034 1052 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 PPIP5K2O43314 1243 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 HSP90AB4PQ58FF6 505 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 DCAF8Q5TAQ9 597 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 ATG9AQ7Z3C6 839 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 ZC3H12CQ9C0D7 883 aaKnown RBP17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 POLLQ9UGP5 575 aa17.96■□□□□ 0.47
NPLOC4-209ENST00000572760 ZNF804BA4D1E1 1349 aa17.96■□□□□ 0.46
NPLOC4-209ENST00000572760 PDE8BO95263 885 aa17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 LMNB1P20700 586 aa17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 IARSP41252 1262 aaKnown RBP17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 WASHC4Q2M389 1173 aa17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 LARGE2Q8N3Y3 721 aa17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 RTFDC1Q9BY42 306 aaPredicted RBP17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 EXOC6BQ9Y2D4 811 aa17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 SNED1Q8TER0 1413 aa17.95■□□□□ 0.46
NPLOC4-209ENST00000572760 ERC1Q8IUD2 1116 aa17.94■□□□□ 0.46
NPLOC4-209ENST00000572760 GPR101Q96P66 508 aaPredicted RBP17.94■□□□□ 0.46
NPLOC4-209ENST00000572760 RNF181Q9P0P0 153 aa17.94■□□□□ 0.46
NPLOC4-209ENST00000572760 DUOX1Q9NRD9 1551 aa17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 APBB1O00213 710 aa17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 UBE4AQ14139 1066 aa17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 AOC3Q16853 763 aa17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 C9orf131Q5VYM1 1079 aa17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 JDP2Q8WYK2 163 aa17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 RWDD1Q9H446 243 aaPredicted RBP17.93■□□□□ 0.46
NPLOC4-209ENST00000572760 SNAP23O00161 211 aa17.92■□□□□ 0.46
NPLOC4-209ENST00000572760 IFIT1P09914 478 aaKnown RBP17.92■□□□□ 0.46
NPLOC4-209ENST00000572760 TFCP2Q12800 502 aa17.92■□□□□ 0.46
NPLOC4-209ENST00000572760 PUM3Q15397 648 aaKnown RBP17.92■□□□□ 0.46
NPLOC4-209ENST00000572760 NIM1KQ8IY84 436 aa17.92■□□□□ 0.46
NPLOC4-209ENST00000572760 AKAP2Q9Y2D5 859 aa17.92■□□□□ 0.46
NPLOC4-209ENST00000572760 RAB11FIP3O75154 756 aa17.91■□□□□ 0.46
NPLOC4-209ENST00000572760 SLC5A1P13866 664 aa17.91■□□□□ 0.46
NPLOC4-209ENST00000572760 KIAA2012Q0VF49 1180 aa17.91■□□□□ 0.46
NPLOC4-209ENST00000572760 ATP2B3Q16720 1220 aa17.91■□□□□ 0.46
NPLOC4-209ENST00000572760 VGLL2Q8N8G2 317 aa17.91■□□□□ 0.46
NPLOC4-209ENST00000572760 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
NPLOC4-209ENST00000572760 MED23Q9ULK4 1368 aa17.91■□□□□ 0.46
NPLOC4-209ENST00000572760 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
NPLOC4-209ENST00000572760 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
NPLOC4-209ENST00000572760 WTIPA6NIX2 430 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms