RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 SEPT3Q9UH03 358 aa5.97□□□□□ -1.45
CDC27-211ENST00000570740 TIMELESSQ9UNS1 1208 aa5.97□□□□□ -1.45
CDC27-211ENST00000570740 J3QW42 95 aa5.96□□□□□ -1.46
CDC27-211ENST00000570740 SSFA2P28290 1259 aa5.96□□□□□ -1.46
CDC27-211ENST00000570740 ADGRE1Q14246 886 aa5.96□□□□□ -1.46
CDC27-211ENST00000570740 DTWD1Q8N5C7 304 aa5.96□□□□□ -1.46
CDC27-211ENST00000570740 GPR152Q8TDT2 470 aa5.96□□□□□ -1.46
CDC27-211ENST00000570740 LENG1Q96BZ8 264 aaPredicted RBP5.96□□□□□ -1.46
CDC27-211ENST00000570740 FNDC3AQ9Y2H6 1198 aaKnown RBP5.96□□□□□ -1.46
CDC27-211ENST00000570740 WFDC8Q8IUA0 241 aa5.95□□□□□ -1.46
CDC27-211ENST00000570740 OR13H1Q8NG92 308 aa5.95□□□□□ -1.46
CDC27-211ENST00000570740 HELQQ8TDG4 1101 aa5.95□□□□□ -1.46
CDC27-211ENST00000570740 PLD4Q96BZ4 506 aa5.95□□□□□ -1.46
CDC27-211ENST00000570740 NSUN5Q96P11 429 aaKnown RBP5.95□□□□□ -1.46
CDC27-211ENST00000570740 GHRHP01286 108 aa5.94□□□□□ -1.46
CDC27-211ENST00000570740 SCNN1AP37088 669 aa5.94□□□□□ -1.46
CDC27-211ENST00000570740 NRG1Q02297 640 aaPredicted RBP5.94□□□□□ -1.46
CDC27-211ENST00000570740 MBTPS1Q14703 1052 aa5.94□□□□□ -1.46
CDC27-211ENST00000570740 SHISA2Q6UWI4 295 aa5.94□□□□□ -1.46
CDC27-211ENST00000570740 FBXO11Q86XK2 927 aa5.94□□□□□ -1.46
CDC27-211ENST00000570740 RBSNQ9H1K0 784 aa5.94□□□□□ -1.46
CDC27-211ENST00000570740 TPSG1Q9NRR2 321 aa5.94□□□□□ -1.46
CDC27-211ENST00000570740 RANGAP1P46060 587 aaPredicted RBP5.93□□□□□ -1.46
CDC27-211ENST00000570740 RSPO4Q2I0M5 234 aaPredicted RBP5.93□□□□□ -1.46
CDC27-211ENST00000570740 TXNRD3Q86VQ6 643 aa5.93□□□□□ -1.46
CDC27-211ENST00000570740 HYAL2Q12891 473 aa5.92□□□□□ -1.46
CDC27-211ENST00000570740 NKAPLQ5M9Q1 402 aa5.92□□□□□ -1.46
CDC27-211ENST00000570740 COL13A1Q5TAT6 717 aaPredicted RBP5.92□□□□□ -1.46
CDC27-211ENST00000570740 TTC39BQ5VTQ0 682 aaPredicted RBP5.92□□□□□ -1.46
CDC27-211ENST00000570740 ATCAYQ86WG3 371 aa5.92□□□□□ -1.46
CDC27-211ENST00000570740 NUDT16Q96DE0 195 aaKnown RBP5.92□□□□□ -1.46
CDC27-211ENST00000570740 SEMA6BQ9H3T3 888 aa5.92□□□□□ -1.46
CDC27-211ENST00000570740 ABI2Q9NYB9 513 aaPredicted RBP5.92□□□□□ -1.46
CDC27-211ENST00000570740 DEAF1O75398 565 aaPredicted RBP5.91□□□□□ -1.46
CDC27-211ENST00000570740 KIF4AO95239 1232 aa5.91□□□□□ -1.46
CDC27-211ENST00000570740 RPLP1P05386 114 aaKnown RBP5.91□□□□□ -1.46
CDC27-211ENST00000570740 ITGB7P26010 798 aa5.91□□□□□ -1.46
CDC27-211ENST00000570740 NOM1Q5C9Z4 860 aaKnown RBP5.91□□□□□ -1.46
CDC27-211ENST00000570740 GDF6Q6KF10 455 aaPredicted RBP5.91□□□□□ -1.46
CDC27-211ENST00000570740 PDE12Q6L8Q7 609 aaKnown RBP5.91□□□□□ -1.46
CDC27-211ENST00000570740 XKR5Q6UX68 686 aa5.91□□□□□ -1.46
CDC27-211ENST00000570740 CACTIN-AS1Q8N1I8 211 aa5.91□□□□□ -1.46
CDC27-211ENST00000570740 GTF3C2Q8WUA4 911 aaPredicted RBP5.91□□□□□ -1.46
CDC27-211ENST00000570740 USP21Q9UK80 565 aa5.91□□□□□ -1.46
CDC27-211ENST00000570740 MPSTP25325 297 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 ZEB1P37275 1124 aaPredicted RBP5.9□□□□□ -1.46
CDC27-211ENST00000570740 PHLDB3Q6NSJ2 640 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 IGF2-ASQ6U949 168 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 IL22RA1Q8N6P7 574 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 EDEM1Q92611 657 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 SPACA7Q96KW9 195 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 ELP3Q9H9T3 547 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 TRIM33Q9UPN9 1127 aa5.9□□□□□ -1.46
CDC27-211ENST00000570740 CARNS1A5YM72 827 aa5.89□□□□□ -1.47
CDC27-211ENST00000570740 DLL1O00548 723 aa5.89□□□□□ -1.47
CDC27-211ENST00000570740 PDGFAP04085 211 aa5.89□□□□□ -1.47
CDC27-211ENST00000570740 CYP2E1P05181 493 aaPredicted RBP5.89□□□□□ -1.47
CDC27-211ENST00000570740 PCSK2P16519 638 aa5.89□□□□□ -1.47
CDC27-211ENST00000570740 NPR3P17342 541 aa5.89□□□□□ -1.47
CDC27-211ENST00000570740 MZF1P28698 734 aaPredicted RBP5.89□□□□□ -1.47
CDC27-211ENST00000570740 EIF1AXP47813 144 aaKnown RBP5.89□□□□□ -1.47
CDC27-211ENST00000570740 DNM1Q05193 864 aaKnown RBP5.89□□□□□ -1.47
CDC27-211ENST00000570740 ZNF438Q7Z4V0 828 aa5.89□□□□□ -1.47
CDC27-211ENST00000570740 SSBP4Q9BWG4 385 aaPredicted RBP5.89□□□□□ -1.47
CDC27-211ENST00000570740 SRA1Q9HD15 236 aaKnown RBP5.89□□□□□ -1.47
CDC27-211ENST00000570740 EIF4G1Q04637 1599 aaKnown RBP5.89□□□□□ -1.47
CDC27-211ENST00000570740 DYRK3O43781 588 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 ATP11AP98196 1134 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 CEP135Q66GS9 1140 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 ALKBH2Q6NS38 261 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 MAP4K3Q8IVH8 894 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 WFDC12Q8WWY7 111 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 MUC3BQ9H195 1237 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 GGNBP2Q9H3C7 697 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 CNTN3Q9P232 1028 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 MTMR7Q9Y216 660 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 USTQ9Y2C2 406 aa5.88□□□□□ -1.47
CDC27-211ENST00000570740 SMNDC1O75940 238 aaKnown RBP eCLIP5.87□□□□□ -1.47
CDC27-211ENST00000570740 H2AFB1P0C5Y9 115 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 H2AFB2P0C5Z0 115 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 NOS3P29474 1203 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 MTMR3Q13615 1198 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 SETDB1Q15047 1291 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 CEP120Q8N960 986 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 PBX4Q9BYU1 374 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 RASSF4Q9H2L5 321 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 SALL4Q9UJQ4 1053 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 PPME1Q9Y570 386 aa5.87□□□□□ -1.47
CDC27-211ENST00000570740 A6NHS1 94 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 FAM13AO94988 1023 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 IREB2P48200 963 aaKnown RBP5.86□□□□□ -1.47
CDC27-211ENST00000570740 SF3B2Q13435 895 aaKnown RBP5.86□□□□□ -1.47
CDC27-211ENST00000570740 C8orf34Q49A92 452 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 NCAPG2Q86XI2 1143 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 C1orf127Q8N9H9 656 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 TTC16Q8NEE8 873 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 DCAF11Q8TEB1 546 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 TP53INP1Q96A56 240 aa5.86□□□□□ -1.47
CDC27-211ENST00000570740 KANSL3Q9P2N6 904 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms