RNA–Protein interactions for RNA: ENST00000570525.5

ABR-207, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-207ENST00000570525 SLKQ9H2G2 1235 aaPredicted RBP18.33■□□□□ 0.52
ABR-207ENST00000570525 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.52
ABR-207ENST00000570525 MROH5Q6ZUA9 1318 aa18.32■□□□□ 0.52
ABR-207ENST00000570525 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
ABR-207ENST00000570525 ST18O60284 1047 aa18.32■□□□□ 0.52
ABR-207ENST00000570525 SLC10A5Q5PT55 438 aa18.32■□□□□ 0.52
ABR-207ENST00000570525 USPL1Q5W0Q7 1092 aa18.32■□□□□ 0.52
ABR-207ENST00000570525 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
ABR-207ENST00000570525 SRP68Q9UHB9 627 aaKnown RBP18.32■□□□□ 0.52
ABR-207ENST00000570525 IFIT1P09914 478 aaKnown RBP18.31■□□□□ 0.52
ABR-207ENST00000570525 FGFR2P21802 821 aa18.31■□□□□ 0.52
ABR-207ENST00000570525 PTH1RQ03431 593 aa18.31■□□□□ 0.52
ABR-207ENST00000570525 SF3B3Q15393 1217 aaKnown RBP18.31■□□□□ 0.52
ABR-207ENST00000570525 ZNF772Q68DY9 489 aaPredicted RBP18.31■□□□□ 0.52
ABR-207ENST00000570525 ZNF512BQ96KM6 892 aaPredicted RBP18.31■□□□□ 0.52
ABR-207ENST00000570525 LRRC4BQ9NT99 713 aa18.31■□□□□ 0.52
ABR-207ENST00000570525 PAG1Q9NWQ8 432 aa18.31■□□□□ 0.52
ABR-207ENST00000570525 PDE8BO95263 885 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 ADRA2BP18089 450 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
ABR-207ENST00000570525 ERFEQ4G0M1 354 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 SLC27A3Q5K4L6 730 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
ABR-207ENST00000570525 ARHGEF1Q92888 912 aaKnown RBP18.3■□□□□ 0.52
ABR-207ENST00000570525 SEC31BQ9NQW1 1179 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 NDUFB9Q9Y6M9 179 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 COL4A1P02462 1669 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 CASZ1Q86V15 1759 aa18.3■□□□□ 0.52
ABR-207ENST00000570525 UBR3Q6ZT12 1888 aa18.29■□□□□ 0.52
ABR-207ENST00000570525 ZPR1O75312 459 aa18.29■□□□□ 0.52
ABR-207ENST00000570525 TTC39AQ5SRH9 613 aa18.29■□□□□ 0.52
ABR-207ENST00000570525 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
ABR-207ENST00000570525 NYXQ9GZU5 481 aa18.29■□□□□ 0.52
ABR-207ENST00000570525 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
ABR-207ENST00000570525 GOLIM4O00461 696 aa18.28■□□□□ 0.52
ABR-207ENST00000570525 MCM2P49736 904 aa18.28■□□□□ 0.52
ABR-207ENST00000570525 PUM3Q15397 648 aaKnown RBP18.28■□□□□ 0.52
ABR-207ENST00000570525 ZNF589Q86UQ0 364 aaPredicted RBP18.28■□□□□ 0.52
ABR-207ENST00000570525 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
ABR-207ENST00000570525 NECTIN1Q15223 517 aa18.27■□□□□ 0.52
ABR-207ENST00000570525 C3orf67Q6ZVT6 689 aa18.27■□□□□ 0.52
ABR-207ENST00000570525 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
ABR-207ENST00000570525 SPRYD3Q8NCJ5 442 aa18.27■□□□□ 0.52
ABR-207ENST00000570525 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.52
ABR-207ENST00000570525 A0A1B0GUL6 1792 aa18.27■□□□□ 0.51
ABR-207ENST00000570525 TAF5LO75529 589 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 IGHMBP2P38935 993 aaKnown RBP18.26■□□□□ 0.51
ABR-207ENST00000570525 NEK4P51957 841 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 SCARF1Q14162 830 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 NBR1Q14596 966 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 NFKBIBQ15653 356 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 ZMYM1Q5SVZ6 1142 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 GORABQ5T7V8 394 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 LPIN2Q92539 896 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 SETDB2Q96T68 719 aa18.26■□□□□ 0.51
ABR-207ENST00000570525 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
ABR-207ENST00000570525 TRIM37O94972 964 aa18.25■□□□□ 0.51
ABR-207ENST00000570525 ARID4AP29374 1257 aaPredicted RBP18.25■□□□□ 0.51
ABR-207ENST00000570525 MCMDC2Q4G0Z9 681 aa18.25■□□□□ 0.51
ABR-207ENST00000570525 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
ABR-207ENST00000570525 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
ABR-207ENST00000570525 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
ABR-207ENST00000570525 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
ABR-207ENST00000570525 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
ABR-207ENST00000570525 AKAP11Q9UKA4 1901 aa18.24■□□□□ 0.51
ABR-207ENST00000570525 SLC5A1P13866 664 aa18.24■□□□□ 0.51
ABR-207ENST00000570525 SSFA2P28290 1259 aa18.24■□□□□ 0.51
ABR-207ENST00000570525 RFC4P35249 363 aa18.24■□□□□ 0.51
ABR-207ENST00000570525 CREB3L3Q68CJ9 461 aa18.24■□□□□ 0.51
ABR-207ENST00000570525 PRPF40BQ6NWY9 871 aaKnown RBP18.24■□□□□ 0.51
ABR-207ENST00000570525 TTC14Q96N46 770 aa18.24■□□□□ 0.51
ABR-207ENST00000570525 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
ABR-207ENST00000570525 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
ABR-207ENST00000570525 TNRC6CQ9HCJ0 1690 aaKnown RBP18.23■□□□□ 0.51
ABR-207ENST00000570525 SLC27A2O14975 620 aa18.23■□□□□ 0.51
ABR-207ENST00000570525 RNF113AO15541 343 aaKnown RBP18.23■□□□□ 0.51
ABR-207ENST00000570525 CHGBP05060 677 aa18.23■□□□□ 0.51
ABR-207ENST00000570525 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
ABR-207ENST00000570525 MCAMP43121 646 aa18.23■□□□□ 0.51
ABR-207ENST00000570525 ZAP70P43403 619 aa18.23■□□□□ 0.51
ABR-207ENST00000570525 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
ABR-207ENST00000570525 PHF14O94880 888 aa18.22■□□□□ 0.51
ABR-207ENST00000570525 ZFYP08048 801 aaPredicted RBP18.22■□□□□ 0.51
ABR-207ENST00000570525 PHKA1P46020 1223 aa18.22■□□□□ 0.51
ABR-207ENST00000570525 LRRFIP1Q32MZ4 808 aaKnown RBP18.22■□□□□ 0.51
ABR-207ENST00000570525 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
ABR-207ENST00000570525 SEC62Q99442 399 aaKnown RBP18.22■□□□□ 0.51
ABR-207ENST00000570525 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
ABR-207ENST00000570525 HMG20BQ9P0W2 317 aa18.22■□□□□ 0.51
ABR-207ENST00000570525 MAST3O60307 1309 aa18.22■□□□□ 0.51
ABR-207ENST00000570525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
ABR-207ENST00000570525 HMGB2P26583 209 aaKnown RBP18.21■□□□□ 0.51
ABR-207ENST00000570525 FKBP4Q02790 459 aaKnown RBP eCLIP18.21■□□□□ 0.51
ABR-207ENST00000570525 CHRNDQ07001 517 aa18.21■□□□□ 0.51
ABR-207ENST00000570525 CUL4AQ13619 759 aa18.21■□□□□ 0.51
ABR-207ENST00000570525 NFIXQ14938 502 aa18.21■□□□□ 0.51
ABR-207ENST00000570525 TSGA10IPQ3SY00 556 aa18.21■□□□□ 0.51
ABR-207ENST00000570525 TPTE2Q6XPS3 522 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms