RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ANGEL2Q5VTE6 544 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-202ENST00000570380 KIAA0100Q14667 2235 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-202ENST00000570380 ANXA1P04083 346 aa13.83□□□□□ -0.2
CTDNEP1-202ENST00000570380 VIL1P09327 827 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-202ENST00000570380 GPSM2P81274 684 aa13.83□□□□□ -0.2
CTDNEP1-202ENST00000570380 SCARF1Q14162 830 aa13.83□□□□□ -0.2
CTDNEP1-202ENST00000570380 PROSER3Q2NL68 480 aa13.83□□□□□ -0.2
CTDNEP1-202ENST00000570380 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-202ENST00000570380 TRMT112Q9UI30 125 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-202ENST00000570380 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
CTDNEP1-202ENST00000570380 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
CTDNEP1-202ENST00000570380 R3HDMLQ9H3Y0 253 aa13.82□□□□□ -0.2
CTDNEP1-202ENST00000570380 SH3TC1Q8TE82 1336 aa13.82□□□□□ -0.2
CTDNEP1-202ENST00000570380 FKTNO75072 461 aa13.81□□□□□ -0.2
CTDNEP1-202ENST00000570380 ZNF280AP59817 542 aaPredicted RBP13.81□□□□□ -0.2
CTDNEP1-202ENST00000570380 HSP90AB3PQ58FF7 597 aa13.81□□□□□ -0.2
CTDNEP1-202ENST00000570380 ZNF428Q96B54 188 aa13.81□□□□□ -0.2
CTDNEP1-202ENST00000570380 SCAF8Q9UPN6 1271 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-202ENST00000570380 EIF2S2P20042 333 aaKnown RBP13.8□□□□□ -0.2
CTDNEP1-202ENST00000570380 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
CTDNEP1-202ENST00000570380 TBC1D16Q8TBP0 767 aa13.8□□□□□ -0.2
CTDNEP1-202ENST00000570380 EYA3Q99504 573 aa13.8□□□□□ -0.2
CTDNEP1-202ENST00000570380 CFHR5Q9BXR6 569 aa13.8□□□□□ -0.2
CTDNEP1-202ENST00000570380 SZT2Q5T011 3432 aa13.8□□□□□ -0.2
CTDNEP1-202ENST00000570380 MKRN3Q13064 507 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-202ENST00000570380 SF3B3Q15393 1217 aaKnown RBP13.79□□□□□ -0.2
CTDNEP1-202ENST00000570380 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
CTDNEP1-202ENST00000570380 COPS6Q7L5N1 327 aa13.79□□□□□ -0.2
CTDNEP1-202ENST00000570380 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
CTDNEP1-202ENST00000570380 ZNF609O15014 1411 aa13.79□□□□□ -0.2
CTDNEP1-202ENST00000570380 PPP2R1AP30153 589 aa13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 TRIM26Q12899 539 aaPredicted RBP13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 RSBN1LQ6PCB5 846 aaPredicted RBP13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 AGBL3Q8NEM8 1001 aa13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 XAGE3Q8WTP9 111 aa13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 PCGF6Q9BYE7 350 aa13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 ZC3H12CQ9C0D7 883 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 ZNF646O15015 1829 aaPredicted RBP13.78□□□□□ -0.2
CTDNEP1-202ENST00000570380 LAMB1P07942 1786 aa13.77□□□□□ -0.21
CTDNEP1-202ENST00000570380 INTS3Q68E01 1043 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-202ENST00000570380 GMLQ99445 158 aa13.77□□□□□ -0.21
CTDNEP1-202ENST00000570380 MYOZ2Q9NPC6 264 aa13.77□□□□□ -0.21
CTDNEP1-202ENST00000570380 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
CTDNEP1-202ENST00000570380 SREBF2Q12772 1141 aa13.76□□□□□ -0.21
CTDNEP1-202ENST00000570380 TTLL12Q14166 644 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-202ENST00000570380 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
CTDNEP1-202ENST00000570380 TRIM17Q9Y577 477 aa13.76□□□□□ -0.21
CTDNEP1-202ENST00000570380 G3V3G9 751 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 EN2P19622 333 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 PTPN12Q05209 780 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 NFE2L2Q16236 605 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 PODXL2Q9NZ53 605 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 TRIOBPQ9H2D6 2365 aa13.75□□□□□ -0.21
CTDNEP1-202ENST00000570380 CEP290O15078 2479 aa13.74□□□□□ -0.21
CTDNEP1-202ENST00000570380 UFL1O94874 794 aa13.74□□□□□ -0.21
CTDNEP1-202ENST00000570380 NBPF9Q3BBW0 867 aa13.74□□□□□ -0.21
CTDNEP1-202ENST00000570380 NEFMP07197 916 aa13.73□□□□□ -0.21
CTDNEP1-202ENST00000570380 ISCA1Q9BUE6 129 aa13.73□□□□□ -0.21
CTDNEP1-202ENST00000570380 ATP5J2-PTCD1G3V325 749 aa13.72□□□□□ -0.21
CTDNEP1-202ENST00000570380 ALDH1A1P00352 501 aa13.72□□□□□ -0.21
CTDNEP1-202ENST00000570380 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-202ENST00000570380 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
CTDNEP1-202ENST00000570380 ANKIB1Q9P2G1 1089 aa13.72□□□□□ -0.21
CTDNEP1-202ENST00000570380 GGA1Q9UJY5 639 aa13.72□□□□□ -0.21
CTDNEP1-202ENST00000570380 PTPN22Q9Y2R2 807 aa13.72□□□□□ -0.21
CTDNEP1-202ENST00000570380 USP17L3A6NCW0 530 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 USP17L4A6NCW7 530 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 NF2P35240 595 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 PRKG1Q13976 671 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 LDLRAD1Q5T700 205 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 ARMC5Q96C12 935 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 SEC31BQ9NQW1 1179 aa13.71□□□□□ -0.21
CTDNEP1-202ENST00000570380 WNT10BO00744 389 aa13.7□□□□□ -0.22
CTDNEP1-202ENST00000570380 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
CTDNEP1-202ENST00000570380 ARMC9Q7Z3E5 817 aa13.7□□□□□ -0.22
CTDNEP1-202ENST00000570380 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
CTDNEP1-202ENST00000570380 PLBD2Q8NHP8 589 aa13.7□□□□□ -0.22
CTDNEP1-202ENST00000570380 SPEF2Q9C093 1822 aa13.69□□□□□ -0.22
CTDNEP1-202ENST00000570380 CAP1Q01518 475 aa13.69□□□□□ -0.22
CTDNEP1-202ENST00000570380 ANKRD13DQ6ZTN6 518 aa13.69□□□□□ -0.22
CTDNEP1-202ENST00000570380 PODNQ7Z5L7 613 aa13.69□□□□□ -0.22
CTDNEP1-202ENST00000570380 MXD3Q9BW11 206 aa13.69□□□□□ -0.22
CTDNEP1-202ENST00000570380 FZD1Q9UP38 647 aa13.69□□□□□ -0.22
CTDNEP1-202ENST00000570380 MANSC4A6NHS7 340 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-202ENST00000570380 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTDNEP1-202ENST00000570380 INHBEP58166 350 aa13.68□□□□□ -0.22
CTDNEP1-202ENST00000570380 KRT24Q2M2I5 525 aa13.68□□□□□ -0.22
CTDNEP1-202ENST00000570380 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
CTDNEP1-202ENST00000570380 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
CTDNEP1-202ENST00000570380 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
CTDNEP1-202ENST00000570380 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms