RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PGAP2Q9UHJ9 254 aa17.84■□□□□ 0.45
GTF3C1-211ENST00000569653 ECE2O60344 883 aa17.83■□□□□ 0.44
GTF3C1-211ENST00000569653 PODXL2Q9NZ53 605 aa17.83■□□□□ 0.44
GTF3C1-211ENST00000569653 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
GTF3C1-211ENST00000569653 A0A1B0GUL6 1792 aa17.82■□□□□ 0.44
GTF3C1-211ENST00000569653 NEURL1BA8MQ27 555 aa17.82■□□□□ 0.44
GTF3C1-211ENST00000569653 DDX58O95786 925 aaKnown RBP17.82■□□□□ 0.44
GTF3C1-211ENST00000569653 TNIP1Q15025 636 aa17.82■□□□□ 0.44
GTF3C1-211ENST00000569653 MICALL2Q8IY33 904 aa17.82■□□□□ 0.44
GTF3C1-211ENST00000569653 BCL2L13Q9BXK5 485 aa17.82■□□□□ 0.44
GTF3C1-211ENST00000569653 CNOT7Q9UIV1 285 aaKnown RBP17.82■□□□□ 0.44
GTF3C1-211ENST00000569653 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 CASP7P55210 303 aa17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 CTSWP56202 376 aa17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 DEFB115Q30KQ5 88 aa17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 CCDC152Q4G0S7 254 aa17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 SAMD7Q7Z3H4 446 aa17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 TTLL11Q8NHH1 800 aa17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 ABT1Q9ULW3 272 aaKnown RBP17.81■□□□□ 0.44
GTF3C1-211ENST00000569653 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
GTF3C1-211ENST00000569653 VAMP4O75379 141 aa17.8■□□□□ 0.44
GTF3C1-211ENST00000569653 UFL1O94874 794 aa17.8■□□□□ 0.44
GTF3C1-211ENST00000569653 STK31Q9BXU1 1019 aa17.8■□□□□ 0.44
GTF3C1-211ENST00000569653 GREM2Q9H772 168 aa17.8■□□□□ 0.44
GTF3C1-211ENST00000569653 WBP1LQ9NX94 342 aa17.8■□□□□ 0.44
GTF3C1-211ENST00000569653 H7C1W4 665 aa17.79■□□□□ 0.44
GTF3C1-211ENST00000569653 ANP32CO43423 234 aa17.79■□□□□ 0.44
GTF3C1-211ENST00000569653 FLIIQ13045 1269 aa17.79■□□□□ 0.44
GTF3C1-211ENST00000569653 TNS4Q8IZW8 715 aa17.79■□□□□ 0.44
GTF3C1-211ENST00000569653 ASTN2O75129 1339 aaPredicted RBP17.78■□□□□ 0.44
GTF3C1-211ENST00000569653 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
GTF3C1-211ENST00000569653 CYP4F22Q6NT55 531 aa17.78■□□□□ 0.44
GTF3C1-211ENST00000569653 UBE3BQ7Z3V4 1068 aa17.78■□□□□ 0.44
GTF3C1-211ENST00000569653 DPF2Q92785 391 aa17.78■□□□□ 0.44
GTF3C1-211ENST00000569653 TLL2Q9Y6L7 1015 aa17.78■□□□□ 0.44
GTF3C1-211ENST00000569653 GCKRQ14397 625 aa17.77■□□□□ 0.44
GTF3C1-211ENST00000569653 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
GTF3C1-211ENST00000569653 WDR63Q8IWG1 891 aa17.77■□□□□ 0.44
GTF3C1-211ENST00000569653 CAPNS2Q96L46 248 aa17.77■□□□□ 0.44
GTF3C1-211ENST00000569653 EYA3Q99504 573 aa17.77■□□□□ 0.44
GTF3C1-211ENST00000569653 ANKIB1Q9P2G1 1089 aa17.77■□□□□ 0.44
GTF3C1-211ENST00000569653 GGA1Q9UJY5 639 aa17.77■□□□□ 0.44
GTF3C1-211ENST00000569653 ZNF609O15014 1411 aa17.76■□□□□ 0.43
GTF3C1-211ENST00000569653 CELF2O95319 508 aaKnown RBP17.76■□□□□ 0.43
GTF3C1-211ENST00000569653 VIL1P09327 827 aaKnown RBP17.76■□□□□ 0.43
GTF3C1-211ENST00000569653 ANKRD18AQ8IVF6 992 aa17.76■□□□□ 0.43
GTF3C1-211ENST00000569653 ZC3H15Q8WU90 426 aaKnown RBP17.76■□□□□ 0.43
GTF3C1-211ENST00000569653 XDHP47989 1333 aa17.75■□□□□ 0.43
GTF3C1-211ENST00000569653 H7C1D1 291 aa17.75■□□□□ 0.43
GTF3C1-211ENST00000569653 HSP90B1P14625 803 aaKnown RBP17.75■□□□□ 0.43
GTF3C1-211ENST00000569653 SAPCD2Q86UD0 394 aa17.75■□□□□ 0.43
GTF3C1-211ENST00000569653 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
GTF3C1-211ENST00000569653 ZC3H12CQ9C0D7 883 aaKnown RBP17.75■□□□□ 0.43
GTF3C1-211ENST00000569653 MINPP1Q9UNW1 487 aa17.75■□□□□ 0.43
GTF3C1-211ENST00000569653 F6X3S4 739 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 AOC2O75106 756 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 CAPN15O75808 1086 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 HSPA8P11142 646 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 KLRK1P26718 216 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 NEXNQ0ZGT2 675 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 FKBP5Q13451 457 aaPredicted RBP17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 USP48Q86UV5 1035 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 TXNRD3Q86VQ6 643 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 DNAAF4Q8WXU2 420 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 GMLQ99445 158 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 PLA2G12BQ9BX93 195 aa17.74■□□□□ 0.43
GTF3C1-211ENST00000569653 ADM5C9JUS6 153 aa17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 RPS12P25398 132 aaKnown RBP17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 LBX1P52954 281 aa17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 GRM1Q13255 1194 aa17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 RBM26Q5T8P6 1007 aaKnown RBP17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 CDC37L1Q7L3B6 337 aa17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 ZNF408Q9H9D4 720 aa17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 BSDC1Q9NW68 430 aaPredicted RBP17.73■□□□□ 0.43
GTF3C1-211ENST00000569653 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
GTF3C1-211ENST00000569653 CSF1RP07333 972 aa17.72■□□□□ 0.43
GTF3C1-211ENST00000569653 CTCFP49711 727 aaPredicted RBP17.72■□□□□ 0.43
GTF3C1-211ENST00000569653 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
GTF3C1-211ENST00000569653 ZIC5Q96T25 663 aa17.72■□□□□ 0.43
GTF3C1-211ENST00000569653 CDC5LQ99459 802 aaKnown RBP17.72■□□□□ 0.43
GTF3C1-211ENST00000569653 MXD3Q9BW11 206 aa17.72■□□□□ 0.43
GTF3C1-211ENST00000569653 MED23Q9ULK4 1368 aa17.71■□□□□ 0.43
GTF3C1-211ENST00000569653 ATP2B4P23634 1241 aa17.71■□□□□ 0.43
GTF3C1-211ENST00000569653 ZNF280AP59817 542 aaPredicted RBP17.71■□□□□ 0.43
GTF3C1-211ENST00000569653 KIF4BQ2VIQ3 1234 aa17.71■□□□□ 0.43
GTF3C1-211ENST00000569653 RSBN1LQ6PCB5 846 aaPredicted RBP17.71■□□□□ 0.43
GTF3C1-211ENST00000569653 PAXIP1Q6ZW49 1069 aaPredicted RBP17.71■□□□□ 0.43
GTF3C1-211ENST00000569653 PRDM10Q9NQV6 1147 aa17.71■□□□□ 0.43
GTF3C1-211ENST00000569653 ITGA6P23229 1130 aa17.7■□□□□ 0.42
GTF3C1-211ENST00000569653 EPHA10Q5JZY3 1008 aa17.7■□□□□ 0.42
GTF3C1-211ENST00000569653 BEND3Q5T5X7 828 aa17.7■□□□□ 0.42
GTF3C1-211ENST00000569653 IRS2Q9Y4H2 1338 aa17.7■□□□□ 0.42
GTF3C1-211ENST00000569653 SNAP23O00161 211 aa17.69■□□□□ 0.42
GTF3C1-211ENST00000569653 CCT4P50991 539 aaKnown RBP17.69■□□□□ 0.42
GTF3C1-211ENST00000569653 FOXO4P98177 505 aa17.69■□□□□ 0.42
GTF3C1-211ENST00000569653 KRT26Q7Z3Y9 468 aa17.69■□□□□ 0.42
GTF3C1-211ENST00000569653 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms