RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 RSBN1LQ6PCB5 846 aaPredicted RBP11.4□□□□□ -0.58
SMG1-216ENST00000569122 BABAM1Q9NWV8 329 aa11.4□□□□□ -0.58
SMG1-216ENST00000569122 POLLQ9UGP5 575 aa11.4□□□□□ -0.58
SMG1-216ENST00000569122 UBE2Q2LH0YL09 131 aa11.39□□□□□ -0.59
SMG1-216ENST00000569122 USP17L8P0C7I0 530 aa11.39□□□□□ -0.59
SMG1-216ENST00000569122 EIF2S2P20042 333 aaKnown RBP11.39□□□□□ -0.59
SMG1-216ENST00000569122 FXR1P51114 621 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMG1-216ENST00000569122 RPS8P62241 208 aaKnown RBP11.39□□□□□ -0.59
SMG1-216ENST00000569122 ARMC9Q7Z3E5 817 aa11.39□□□□□ -0.59
SMG1-216ENST00000569122 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
SMG1-216ENST00000569122 MYOZ2Q9NPC6 264 aa11.39□□□□□ -0.59
SMG1-216ENST00000569122 PODXL2Q9NZ53 605 aa11.39□□□□□ -0.59
SMG1-216ENST00000569122 GPSM2P81274 684 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 COPS6Q7L5N1 327 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 KCNQ5Q9NR82 932 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
SMG1-216ENST00000569122 ZNF609O15014 1411 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 MANSC4A6NHS7 340 aaPredicted RBP11.37□□□□□ -0.59
SMG1-216ENST00000569122 AIMP1Q12904 312 aaKnown RBP11.37□□□□□ -0.59
SMG1-216ENST00000569122 ARHGEF6Q15052 776 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 PDIA6Q15084 440 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 OTUD7BQ6GQQ9 843 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 LRP10Q7Z4F1 713 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 PODNQ7Z5L7 613 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 CELF1Q92879 486 aaKnown RBP11.37□□□□□ -0.59
SMG1-216ENST00000569122 ERO1AQ96HE7 468 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
SMG1-216ENST00000569122 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 ANKIB1Q9P2G1 1089 aa11.37□□□□□ -0.59
SMG1-216ENST00000569122 USP17L3A6NCW0 530 aa11.36□□□□□ -0.59
SMG1-216ENST00000569122 USP17L4A6NCW7 530 aa11.36□□□□□ -0.59
SMG1-216ENST00000569122 UFL1O94874 794 aa11.36□□□□□ -0.59
SMG1-216ENST00000569122 NFE2L2Q16236 605 aa11.36□□□□□ -0.59
SMG1-216ENST00000569122 USP17L1Q7RTZ2 530 aa11.36□□□□□ -0.59
SMG1-216ENST00000569122 XAGE3Q8WTP9 111 aa11.36□□□□□ -0.59
SMG1-216ENST00000569122 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
SMG1-216ENST00000569122 ASTN2O75129 1339 aaPredicted RBP11.35□□□□□ -0.59
SMG1-216ENST00000569122 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
SMG1-216ENST00000569122 UNCXA6NJT0 531 aa11.35□□□□□ -0.59
SMG1-216ENST00000569122 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
SMG1-216ENST00000569122 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
SMG1-216ENST00000569122 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
SMG1-216ENST00000569122 PAPPA2Q9BXP8 1791 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 POTEFA5A3E0 1075 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 PPP2R1AP30153 589 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
SMG1-216ENST00000569122 SPRYD7Q5W111 196 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 MOB2Q70IA6 237 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 ARMC5Q96C12 935 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 SLC10A4Q96EP9 437 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 FAM89AQ96GI7 184 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 GMLQ99445 158 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 PTPN22Q9Y2R2 807 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 MYO3BQ8WXR4 1341 aa11.34□□□□□ -0.59
SMG1-216ENST00000569122 NUP98P52948 1817 aa11.33□□□□□ -0.6
SMG1-216ENST00000569122 IRS4O14654 1257 aaPredicted RBP11.33□□□□□ -0.6
SMG1-216ENST00000569122 ZBTB48P10074 688 aaPredicted RBP11.33□□□□□ -0.6
SMG1-216ENST00000569122 ATP2B4P23634 1241 aa11.33□□□□□ -0.6
SMG1-216ENST00000569122 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.6
SMG1-216ENST00000569122 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
SMG1-216ENST00000569122 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
SMG1-216ENST00000569122 IFNL1Q8IU54 200 aa11.33□□□□□ -0.6
SMG1-216ENST00000569122 APOBEC3FQ8IUX4 373 aaKnown RBP11.33□□□□□ -0.6
SMG1-216ENST00000569122 EFCC1Q9HA90 598 aa11.33□□□□□ -0.6
SMG1-216ENST00000569122 PPP1R12BO60237 982 aaPredicted RBP11.32□□□□□ -0.6
SMG1-216ENST00000569122 LMOD3Q0VAK6 560 aa11.32□□□□□ -0.6
SMG1-216ENST00000569122 PROSER3Q2NL68 480 aa11.32□□□□□ -0.6
SMG1-216ENST00000569122 CCDC152Q4G0S7 254 aa11.32□□□□□ -0.6
SMG1-216ENST00000569122 LDLRAD1Q5T700 205 aa11.32□□□□□ -0.6
SMG1-216ENST00000569122 ISCA1Q9BUE6 129 aa11.32□□□□□ -0.6
SMG1-216ENST00000569122 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
SMG1-216ENST00000569122 DUOX1Q9NRD9 1551 aa11.32□□□□□ -0.6
SMG1-216ENST00000569122 XDHP47989 1333 aa11.32□□□□□ -0.6
SMG1-216ENST00000569122 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
SMG1-216ENST00000569122 WNT10BO00744 389 aa11.31□□□□□ -0.6
SMG1-216ENST00000569122 ANXA1P04083 346 aa11.31□□□□□ -0.6
SMG1-216ENST00000569122 EN2P19622 333 aaPredicted RBP11.31□□□□□ -0.6
SMG1-216ENST00000569122 NBPF9Q3BBW0 867 aa11.31□□□□□ -0.6
SMG1-216ENST00000569122 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
SMG1-216ENST00000569122 PLEKHF1Q96S99 279 aa11.31□□□□□ -0.6
SMG1-216ENST00000569122 R3HDMLQ9H3Y0 253 aa11.31□□□□□ -0.6
SMG1-216ENST00000569122 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
SMG1-216ENST00000569122 DLL1O00548 723 aa11.3□□□□□ -0.6
SMG1-216ENST00000569122 SP3Q02447 781 aa11.3□□□□□ -0.6
SMG1-216ENST00000569122 SLC4A8Q2Y0W8 1093 aa11.3□□□□□ -0.6
SMG1-216ENST00000569122 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
SMG1-216ENST00000569122 ANKRD18AQ8IVF6 992 aa11.3□□□□□ -0.6
SMG1-216ENST00000569122 ZBTB38Q8NAP3 1195 aaPredicted RBP11.3□□□□□ -0.6
SMG1-216ENST00000569122 SLC17A8Q8NDX2 589 aa11.3□□□□□ -0.6
SMG1-216ENST00000569122 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
SMG1-216ENST00000569122 WDHD1O75717 1129 aaPredicted RBP11.29□□□□□ -0.6
SMG1-216ENST00000569122 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
SMG1-216ENST00000569122 SUPT20HL1Q3ZLR7 823 aa11.29□□□□□ -0.6
SMG1-216ENST00000569122 HYPKQ9NX55 129 aa11.29□□□□□ -0.6
SMG1-216ENST00000569122 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms