RNA–Protein interactions for RNA: ENST00000568672.1

NAE1-219, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-219ENST00000568672 SPSB2Q99619 263 aa10.54□□□□□ -0.72
NAE1-219ENST00000568672 TMUB1Q9BVT8 246 aa10.54□□□□□ -0.72
NAE1-219ENST00000568672 SLC6A16Q9GZN6 736 aa10.54□□□□□ -0.72
NAE1-219ENST00000568672 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
NAE1-219ENST00000568672 TBC1D2BQ9UPU7 963 aa10.54□□□□□ -0.72
NAE1-219ENST00000568672 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
NAE1-219ENST00000568672 MYL6BP14649 208 aa10.53□□□□□ -0.72
NAE1-219ENST00000568672 SSFA2P28290 1259 aa10.53□□□□□ -0.72
NAE1-219ENST00000568672 LRP10Q7Z4F1 713 aa10.53□□□□□ -0.72
NAE1-219ENST00000568672 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
NAE1-219ENST00000568672 TEX13AQ9BXU3 409 aaPredicted RBP10.53□□□□□ -0.72
NAE1-219ENST00000568672 CICQ96RK0 1608 aaPredicted RBP10.53□□□□□ -0.72
NAE1-219ENST00000568672 IL16Q14005 1332 aa10.53□□□□□ -0.72
NAE1-219ENST00000568672 GYS1P13807 737 aa10.52□□□□□ -0.73
NAE1-219ENST00000568672 HNRNPUQ00839 825 aaKnown RBP eCLIP10.52□□□□□ -0.73
NAE1-219ENST00000568672 CALD1Q05682 793 aaKnown RBP10.52□□□□□ -0.73
NAE1-219ENST00000568672 EXOSC9Q06265 439 aaKnown RBP10.52□□□□□ -0.73
NAE1-219ENST00000568672 USPL1Q5W0Q7 1092 aa10.52□□□□□ -0.73
NAE1-219ENST00000568672 TTLL7Q6ZT98 887 aa10.52□□□□□ -0.73
NAE1-219ENST00000568672 HLA-CQ95604 372 aa10.52□□□□□ -0.73
NAE1-219ENST00000568672 ARXQ96QS3 562 aa10.52□□□□□ -0.73
NAE1-219ENST00000568672 KDM4AO75164 1064 aa10.51□□□□□ -0.73
NAE1-219ENST00000568672 RFC4P35249 363 aa10.51□□□□□ -0.73
NAE1-219ENST00000568672 SLFN5Q08AF3 891 aa10.51□□□□□ -0.73
NAE1-219ENST00000568672 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
NAE1-219ENST00000568672 MTFR1LQ9H019 292 aa10.51□□□□□ -0.73
NAE1-219ENST00000568672 FAM217BQ9NTX9 383 aaPredicted RBP10.51□□□□□ -0.73
NAE1-219ENST00000568672 CHPF2Q9P2E5 772 aa10.51□□□□□ -0.73
NAE1-219ENST00000568672 COL15A1P39059 1388 aa10.51□□□□□ -0.73
NAE1-219ENST00000568672 IL6STP40189 918 aaPredicted RBP10.5□□□□□ -0.73
NAE1-219ENST00000568672 HLFQ16534 295 aa10.5□□□□□ -0.73
NAE1-219ENST00000568672 RNF19BQ6ZMZ0 732 aa10.5□□□□□ -0.73
NAE1-219ENST00000568672 FLAD1Q8NFF5 587 aa10.5□□□□□ -0.73
NAE1-219ENST00000568672 SPON1Q9HCB6 807 aa10.5□□□□□ -0.73
NAE1-219ENST00000568672 NARFQ9UHQ1 456 aa10.5□□□□□ -0.73
NAE1-219ENST00000568672 V9GY48 417 aaPredicted RBP10.5□□□□□ -0.73
NAE1-219ENST00000568672 USP42Q9H9J4 1324 aaKnown RBP10.5□□□□□ -0.73
NAE1-219ENST00000568672 QSER1Q2KHR3 1735 aa10.5□□□□□ -0.73
NAE1-219ENST00000568672 VAMP4O75379 141 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 CAMTA2O94983 1202 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 DDR1Q08345 913 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 HDGFL1Q5TGJ6 251 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 DZIP3Q86Y13 1208 aaKnown RBP10.49□□□□□ -0.73
NAE1-219ENST00000568672 ANKLE1Q8NAG6 615 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 SLC16A10Q8TF71 515 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 EMID1Q96A84 441 aaPredicted RBP10.49□□□□□ -0.73
NAE1-219ENST00000568672 ZNF428Q96B54 188 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 THAP11Q96EK4 314 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 PRDM9Q9NQV7 894 aa10.49□□□□□ -0.73
NAE1-219ENST00000568672 C4AP0C0L4 1744 aa10.48□□□□□ -0.73
NAE1-219ENST00000568672 FMNL1O95466 1100 aaPredicted RBP10.48□□□□□ -0.73
NAE1-219ENST00000568672 MMP10P09238 476 aa10.48□□□□□ -0.73
NAE1-219ENST00000568672 AIMP1Q12904 312 aaKnown RBP10.48□□□□□ -0.73
NAE1-219ENST00000568672 NFIXQ14938 502 aa10.48□□□□□ -0.73
NAE1-219ENST00000568672 TWISTNBQ3B726 338 aaPredicted RBP10.48□□□□□ -0.73
NAE1-219ENST00000568672 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
NAE1-219ENST00000568672 G2E3Q7L622 706 aa10.48□□□□□ -0.73
NAE1-219ENST00000568672 TRMT2AQ8IZ69 625 aaKnown RBP10.48□□□□□ -0.73
NAE1-219ENST00000568672 XAGE3Q8WTP9 111 aa10.48□□□□□ -0.73
NAE1-219ENST00000568672 PHAXQ9H814 394 aaKnown RBP10.48□□□□□ -0.73
NAE1-219ENST00000568672 LAMB4A4D0S4 1761 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 GFRA3O60609 400 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 TM4SF1P30408 202 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 COPS6Q7L5N1 327 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 FAM160A2Q8N612 972 aaPredicted RBP10.47□□□□□ -0.73
NAE1-219ENST00000568672 ZBTB3Q9H5J0 574 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 MYH16Q9H6N6 1097 aa10.47□□□□□ -0.73
NAE1-219ENST00000568672 DDX21Q9NR30 783 aaKnown RBP eCLIP10.47□□□□□ -0.73
NAE1-219ENST00000568672 A0A087WZG4 1122 aa10.46□□□□□ -0.73
NAE1-219ENST00000568672 E9PSI1 815 aa10.46□□□□□ -0.73
NAE1-219ENST00000568672 SLC19A1P41440 591 aa10.46□□□□□ -0.73
NAE1-219ENST00000568672 PLA2G2CQ5R387 149 aa10.46□□□□□ -0.73
NAE1-219ENST00000568672 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
NAE1-219ENST00000568672 HOXB7P09629 217 aa10.45□□□□□ -0.74
NAE1-219ENST00000568672 HMGB2P26583 209 aaKnown RBP10.45□□□□□ -0.74
NAE1-219ENST00000568672 SSTR3P32745 418 aaPredicted RBP10.45□□□□□ -0.74
NAE1-219ENST00000568672 GIGYF2Q6Y7W6 1299 aaKnown RBP10.45□□□□□ -0.74
NAE1-219ENST00000568672 LIAT1Q6ZQX7 453 aa10.45□□□□□ -0.74
NAE1-219ENST00000568672 NLGN1Q8N2Q7 840 aa10.45□□□□□ -0.74
NAE1-219ENST00000568672 ERBB4Q15303 1308 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 MAP3K15Q6ZN16 1313 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 POLRMTO00411 1230 aaKnown RBP10.44□□□□□ -0.74
NAE1-219ENST00000568672 HOXA2O43364 376 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 GPTP24298 496 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 POLD1P28340 1107 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 AMHR2Q16671 573 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 Q6ZNB5 142 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 NUTM1Q86Y26 1132 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 NLGN2Q8NFZ4 835 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 YTHDC1Q96MU7 727 aaKnown RBP10.44□□□□□ -0.74
NAE1-219ENST00000568672 FHDC1Q9C0D6 1143 aaPredicted RBP10.44□□□□□ -0.74
NAE1-219ENST00000568672 DBF4Q9UBU7 674 aaPredicted RBP10.44□□□□□ -0.74
NAE1-219ENST00000568672 PPP1R1BQ9UD71 204 aaPredicted RBP10.44□□□□□ -0.74
NAE1-219ENST00000568672 COL24A1Q17RW2 1714 aa10.44□□□□□ -0.74
NAE1-219ENST00000568672 SERPINB2P05120 415 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms