RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 VAMP4O75379 141 aa24.24■■□□□ 1.47
SPSB3-210ENST00000568416 FLIIQ13045 1269 aa24.24■■□□□ 1.47
SPSB3-210ENST00000568416 DOK7Q18PE1 504 aa24.24■■□□□ 1.47
SPSB3-210ENST00000568416 ANKRD18AQ8IVF6 992 aa24.24■■□□□ 1.47
SPSB3-210ENST00000568416 TRPM4Q8TD43 1214 aa24.24■■□□□ 1.47
SPSB3-210ENST00000568416 ZC3H15Q8WU90 426 aaKnown RBP24.24■■□□□ 1.47
SPSB3-210ENST00000568416 DPF2Q92785 391 aa24.24■■□□□ 1.47
SPSB3-210ENST00000568416 ZC3H12CQ9C0D7 883 aaKnown RBP24.24■■□□□ 1.47
SPSB3-210ENST00000568416 ABT1Q9ULW3 272 aaKnown RBP24.24■■□□□ 1.47
SPSB3-210ENST00000568416 H7C1W4 665 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 UFL1O94874 794 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 CST9Q5W186 159 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 MICALL2Q8IY33 904 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 TTLL11Q8NHH1 800 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 KCNQ5Q9NR82 932 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 ANKIB1Q9P2G1 1089 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 GGA1Q9UJY5 639 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 RTL9Q8NET4 1388 aa24.23■■□□□ 1.47
SPSB3-210ENST00000568416 H7C1D1 291 aa24.22■■□□□ 1.47
SPSB3-210ENST00000568416 EXOSC9Q06265 439 aaKnown RBP24.22■■□□□ 1.47
SPSB3-210ENST00000568416 CDC5LQ99459 802 aaKnown RBP24.21■■□□□ 1.47
SPSB3-210ENST00000568416 SPINK5Q9NQ38 1064 aaPredicted RBP24.21■■□□□ 1.47
SPSB3-210ENST00000568416 XDHP47989 1333 aa24.2■■□□□ 1.46
SPSB3-210ENST00000568416 RPS12P25398 132 aaKnown RBP24.2■■□□□ 1.46
SPSB3-210ENST00000568416 GLIS2Q9BZE0 524 aaPredicted RBP24.2■■□□□ 1.46
SPSB3-210ENST00000568416 GREM2Q9H772 168 aa24.2■■□□□ 1.46
SPSB3-210ENST00000568416 WDR33Q9C0J8 1336 aaKnown RBP24.19■■□□□ 1.46
SPSB3-210ENST00000568416 FOXN1O15353 648 aa24.19■■□□□ 1.46
SPSB3-210ENST00000568416 FKBP5Q13451 457 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-210ENST00000568416 GCKRQ14397 625 aa24.19■■□□□ 1.46
SPSB3-210ENST00000568416 UBE3BQ7Z3V4 1068 aa24.19■■□□□ 1.46
SPSB3-210ENST00000568416 DNAAF4Q8WXU2 420 aa24.19■■□□□ 1.46
SPSB3-210ENST00000568416 TLL2Q9Y6L7 1015 aa24.19■■□□□ 1.46
SPSB3-210ENST00000568416 VIL1P09327 827 aaKnown RBP24.18■■□□□ 1.46
SPSB3-210ENST00000568416 ATP2B4P23634 1241 aa24.18■■□□□ 1.46
SPSB3-210ENST00000568416 CASP7P55210 303 aa24.18■■□□□ 1.46
SPSB3-210ENST00000568416 SAMD7Q7Z3H4 446 aa24.18■■□□□ 1.46
SPSB3-210ENST00000568416 FAM9BQ8IZU0 186 aa24.18■■□□□ 1.46
SPSB3-210ENST00000568416 PLA2G12BQ9BX93 195 aa24.18■■□□□ 1.46
SPSB3-210ENST00000568416 WBP1LQ9NX94 342 aa24.18■■□□□ 1.46
SPSB3-210ENST00000568416 CDC37L1Q7L3B6 337 aa24.17■■□□□ 1.46
SPSB3-210ENST00000568416 TNS4Q8IZW8 715 aa24.17■■□□□ 1.46
SPSB3-210ENST00000568416 LINS1Q8NG48 757 aa24.17■■□□□ 1.46
SPSB3-210ENST00000568416 BSDC1Q9NW68 430 aaPredicted RBP24.17■■□□□ 1.46
SPSB3-210ENST00000568416 G3V3G9 751 aa24.16■■□□□ 1.46
SPSB3-210ENST00000568416 CELF2O95319 508 aaKnown RBP24.16■■□□□ 1.46
SPSB3-210ENST00000568416 EGFRP00533 1210 aa24.16■■□□□ 1.46
SPSB3-210ENST00000568416 DCAF8Q5TAQ9 597 aa24.16■■□□□ 1.46
SPSB3-210ENST00000568416 MYH16Q9H6N6 1097 aa24.16■■□□□ 1.46
SPSB3-210ENST00000568416 MINPP1Q9UNW1 487 aa24.16■■□□□ 1.46
SPSB3-210ENST00000568416 TBC1D10BQ4KMP7 808 aaPredicted RBP24.15■■□□□ 1.46
SPSB3-210ENST00000568416 ZNF609O15014 1411 aa24.15■■□□□ 1.46
SPSB3-210ENST00000568416 ECE1P42892 770 aa24.14■■□□□ 1.45
SPSB3-210ENST00000568416 AIDAQ96BJ3 306 aa24.14■■□□□ 1.45
SPSB3-210ENST00000568416 CAPNS2Q96L46 248 aa24.14■■□□□ 1.45
SPSB3-210ENST00000568416 TRPM7Q96QT4 1865 aa24.13■■□□□ 1.45
SPSB3-210ENST00000568416 WTIPA6NIX2 430 aaPredicted RBP24.13■■□□□ 1.45
SPSB3-210ENST00000568416 CSF1RP07333 972 aa24.13■■□□□ 1.45
SPSB3-210ENST00000568416 CYP4F22Q6NT55 531 aa24.13■■□□□ 1.45
SPSB3-210ENST00000568416 SAPCD2Q86UD0 394 aa24.13■■□□□ 1.45
SPSB3-210ENST00000568416 THSD7BQ9C0I4 1608 aa24.13■■□□□ 1.45
SPSB3-210ENST00000568416 CTCFP49711 727 aaPredicted RBP24.12■■□□□ 1.45
SPSB3-210ENST00000568416 PAXIP1Q6ZW49 1069 aaPredicted RBP24.12■■□□□ 1.45
SPSB3-210ENST00000568416 USP48Q86UV5 1035 aa24.12■■□□□ 1.45
SPSB3-210ENST00000568416 PRDM10Q9NQV6 1147 aa24.12■■□□□ 1.45
SPSB3-210ENST00000568416 MED23Q9ULK4 1368 aa24.12■■□□□ 1.45
SPSB3-210ENST00000568416 SCN9AQ15858 1988 aa24.11■■□□□ 1.45
SPSB3-210ENST00000568416 PCNTO95613 3336 aa24.11■■□□□ 1.45
SPSB3-210ENST00000568416 ITGA6P23229 1130 aa24.11■■□□□ 1.45
SPSB3-210ENST00000568416 IGHMBP2P38935 993 aaKnown RBP24.11■■□□□ 1.45
SPSB3-210ENST00000568416 CCT4P50991 539 aaKnown RBP24.11■■□□□ 1.45
SPSB3-210ENST00000568416 MAP2K1Q02750 393 aaPredicted RBP24.11■■□□□ 1.45
SPSB3-210ENST00000568416 FAM161AQ3B820 660 aa24.11■■□□□ 1.45
SPSB3-210ENST00000568416 RBM26Q5T8P6 1007 aaKnown RBP24.11■■□□□ 1.45
SPSB3-210ENST00000568416 RSBN1LQ6PCB5 846 aaPredicted RBP24.11■■□□□ 1.45
SPSB3-210ENST00000568416 PODNQ7Z5L7 613 aa24.11■■□□□ 1.45
SPSB3-210ENST00000568416 AGBL3Q8NEM8 1001 aa24.11■■□□□ 1.45
SPSB3-210ENST00000568416 ZNF408Q9H9D4 720 aa24.11■■□□□ 1.45
SPSB3-210ENST00000568416 F6X3S4 739 aa24.1■■□□□ 1.45
SPSB3-210ENST00000568416 KIF4BQ2VIQ3 1234 aa24.1■■□□□ 1.45
SPSB3-210ENST00000568416 BEND3Q5T5X7 828 aa24.1■■□□□ 1.45
SPSB3-210ENST00000568416 HHIPL1Q96JK4 782 aa24.1■■□□□ 1.45
SPSB3-210ENST00000568416 MYH3P11055 1940 aa24.1■■□□□ 1.45
SPSB3-210ENST00000568416 ZNF521Q96K83 1311 aa24.1■■□□□ 1.45
SPSB3-210ENST00000568416 ZNF280AP59817 542 aaPredicted RBP24.09■■□□□ 1.45
SPSB3-210ENST00000568416 DLK2Q6UY11 383 aa24.09■■□□□ 1.45
SPSB3-210ENST00000568416 GMLQ99445 158 aa24.09■■□□□ 1.45
SPSB3-210ENST00000568416 KRT26Q7Z3Y9 468 aa24.08■■□□□ 1.45
SPSB3-210ENST00000568416 DCPSQ96C86 337 aaKnown RBP24.08■■□□□ 1.45
SPSB3-210ENST00000568416 LEMD3Q9Y2U8 911 aa24.08■■□□□ 1.45
SPSB3-210ENST00000568416 USP17L3A6NCW0 530 aa24.07■■□□□ 1.44
SPSB3-210ENST00000568416 USP17L4A6NCW7 530 aa24.07■■□□□ 1.44
SPSB3-210ENST00000568416 GRM1Q13255 1194 aa24.07■■□□□ 1.44
SPSB3-210ENST00000568416 USP17L1Q7RTZ2 530 aa24.07■■□□□ 1.44
SPSB3-210ENST00000568416 ADM5C9JUS6 153 aa24.06■■□□□ 1.44
SPSB3-210ENST00000568416 HSPA8P11142 646 aaKnown RBP24.06■■□□□ 1.44
SPSB3-210ENST00000568416 FOXO4P98177 505 aa24.06■■□□□ 1.44
SPSB3-210ENST00000568416 ANKRD2Q9GZV1 360 aa24.06■■□□□ 1.44
SPSB3-210ENST00000568416 CACNA1FO60840 1977 aa24.05■■□□□ 1.44
SPSB3-210ENST00000568416 SPEF2Q9C093 1822 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms