RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
CDH1-210ENST00000566612 DNAJC25Q9H1X3 360 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 BTG4Q9NY30 223 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 ADAMTS13Q76LX8 1427 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 SASH1O94885 1247 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 SLC5A1P13866 664 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 CLIP2Q9UDT6 1046 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 COL3A1P02461 1466 aaPredicted RBP13.53□□□□□ -0.24
CDH1-210ENST00000566612 PRC1O43663 620 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 KBTBD3Q8NAB2 608 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
CDH1-210ENST00000566612 USP31Q70CQ4 1352 aa13.53□□□□□ -0.24
CDH1-210ENST00000566612 TMEM67Q5HYA8 995 aa13.52□□□□□ -0.24
CDH1-210ENST00000566612 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.24
CDH1-210ENST00000566612 DBNLQ9UJU6 430 aaKnown RBP13.52□□□□□ -0.24
CDH1-210ENST00000566612 SLC12A7Q9Y666 1083 aa13.52□□□□□ -0.24
CDH1-210ENST00000566612 GOLGA8AA7E2F4 631 aa13.52□□□□□ -0.25
CDH1-210ENST00000566612 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
CDH1-210ENST00000566612 UVSSAQ2YD98 709 aa13.52□□□□□ -0.25
CDH1-210ENST00000566612 ATP5JP18859 108 aa13.52□□□□□ -0.25
CDH1-210ENST00000566612 TYRO3Q06418 890 aa13.52□□□□□ -0.25
CDH1-210ENST00000566612 LUZP1Q86V48 1076 aa13.52□□□□□ -0.25
CDH1-210ENST00000566612 PREX1Q8TCU6 1659 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDH1-210ENST00000566612 LRRC24Q50LG9 513 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 OTUD7BQ6GQQ9 843 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 FAM177A1Q8N128 213 aaPredicted RBP13.51□□□□□ -0.25
CDH1-210ENST00000566612 ANO10Q9NW15 660 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 TMEM94Q12767 1356 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 RANBP6O60518 1105 aaKnown RBP13.51□□□□□ -0.25
CDH1-210ENST00000566612 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 EPHA10Q5JZY3 1008 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
CDH1-210ENST00000566612 CCDC191Q8NCU4 936 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 NEURL4Q96JN8 1562 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 LARGE1O95461 756 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 CUL4AQ13619 759 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
CDH1-210ENST00000566612 FAM200AQ8TCP9 573 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 C16orf45Q96MC5 204 aaPredicted RBP13.51□□□□□ -0.25
CDH1-210ENST00000566612 ZSWIM6Q9HCJ5 1215 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 TMEM131LA2VDJ0 1609 aa13.51□□□□□ -0.25
CDH1-210ENST00000566612 IGKV5-2P06315 115 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 ZFYP08048 801 aaPredicted RBP13.5□□□□□ -0.25
CDH1-210ENST00000566612 IARSP41252 1262 aaKnown RBP13.5□□□□□ -0.25
CDH1-210ENST00000566612 DLC1Q96QB1 1528 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 TPM1P09493 284 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 MARCKSP29966 332 aaPredicted RBP13.5□□□□□ -0.25
CDH1-210ENST00000566612 CCDC186Q7Z3E2 898 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 TM6SF1Q9BZW5 370 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 TRMT1Q9NXH9 659 aaKnown RBP13.5□□□□□ -0.25
CDH1-210ENST00000566612 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
CDH1-210ENST00000566612 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
CDH1-210ENST00000566612 SLC26A6Q9BXS9 759 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 MTMR6Q9Y217 621 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
CDH1-210ENST00000566612 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDH1-210ENST00000566612 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 ATP6V1AP38606 617 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 TTF1Q15361 905 aaPredicted RBP13.49□□□□□ -0.25
CDH1-210ENST00000566612 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 PCMTD1Q96MG8 357 aaPredicted RBP13.49□□□□□ -0.25
CDH1-210ENST00000566612 PUS3Q9BZE2 481 aaKnown RBP13.49□□□□□ -0.25
CDH1-210ENST00000566612 C17orf53Q8N3J3 647 aaPredicted RBP13.49□□□□□ -0.25
CDH1-210ENST00000566612 CCDC112Q8NEF3 446 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 SLAIN2Q9P270 581 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
CDH1-210ENST00000566612 ITGA6P23229 1130 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 CFAP100Q494V2 611 aa13.49□□□□□ -0.25
CDH1-210ENST00000566612 RGS12O14924 1447 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 PTPRUQ92729 1446 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 NOLC1Q14978 699 aaKnown RBP eCLIP13.48□□□□□ -0.25
CDH1-210ENST00000566612 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
CDH1-210ENST00000566612 CAVIN4Q5BKX8 364 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 ALG1Q9BT22 464 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 CYP27B1O15528 508 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 COPRSQ9NQ92 184 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
CDH1-210ENST00000566612 TAF5LO75529 589 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 ZAP70P43403 619 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 MIGA1Q8NAN2 632 aa13.48□□□□□ -0.25
CDH1-210ENST00000566612 CTAGE5O15320 804 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 EPB41L2O43491 1005 aaKnown RBP13.47□□□□□ -0.25
CDH1-210ENST00000566612 SLFNL1Q499Z3 407 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 IL25Q9H293 177 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 HELLSQ9NRZ9 838 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 NIP7Q9Y221 180 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDH1-210ENST00000566612 ANKRD20A12PQ8NF67 263 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
CDH1-210ENST00000566612 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms