RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 KCNA3P22001 575 aa18.34■□□□□ 0.53
SPG7-213ENST00000566221 PRPF40BQ6NWY9 871 aaKnown RBP18.34■□□□□ 0.53
SPG7-213ENST00000566221 LDHAL6AQ6ZMR3 332 aa18.34■□□□□ 0.53
SPG7-213ENST00000566221 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
SPG7-213ENST00000566221 CNNM1Q9NRU3 951 aa18.34■□□□□ 0.53
SPG7-213ENST00000566221 BSDC1Q9NW68 430 aaPredicted RBP18.34■□□□□ 0.53
SPG7-213ENST00000566221 CEP350Q5VT06 3117 aa18.34■□□□□ 0.53
SPG7-213ENST00000566221 G3BP1Q13283 466 aaKnown RBP eCLIP18.33■□□□□ 0.527e-7■■■■□ 23.9
SPG7-213ENST00000566221 OS9Q13438 667 aaPredicted RBP18.33■□□□□ 0.52
SPG7-213ENST00000566221 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
SPG7-213ENST00000566221 NLGN2Q8NFZ4 835 aa18.33■□□□□ 0.52
SPG7-213ENST00000566221 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
SPG7-213ENST00000566221 FER1L6Q2WGJ9 1857 aa18.33■□□□□ 0.52
SPG7-213ENST00000566221 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
SPG7-213ENST00000566221 GCC1Q96CN9 775 aa18.32■□□□□ 0.52
SPG7-213ENST00000566221 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
SPG7-213ENST00000566221 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
SPG7-213ENST00000566221 EXOC6BQ9Y2D4 811 aa18.32■□□□□ 0.52
SPG7-213ENST00000566221 MROH5Q6ZUA9 1318 aa18.31■□□□□ 0.52
SPG7-213ENST00000566221 IGHDP01880 384 aa18.31■□□□□ 0.52
SPG7-213ENST00000566221 IL15P40933 162 aaPredicted RBP18.31■□□□□ 0.52
SPG7-213ENST00000566221 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
SPG7-213ENST00000566221 ATG9AQ7Z3C6 839 aa18.31■□□□□ 0.52
SPG7-213ENST00000566221 RAB11FIP3O75154 756 aa18.3■□□□□ 0.52
SPG7-213ENST00000566221 DALRD3Q5D0E6 543 aaKnown RBP18.3■□□□□ 0.52
SPG7-213ENST00000566221 TMX4Q9H1E5 349 aaPredicted RBP18.3■□□□□ 0.52
SPG7-213ENST00000566221 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
SPG7-213ENST00000566221 RIPOR2Q9Y4F9 1068 aa18.3■□□□□ 0.52
SPG7-213ENST00000566221 SP8Q8IXZ3 490 aa18.29■□□□□ 0.52
SPG7-213ENST00000566221 SMC5Q8IY18 1101 aa18.29■□□□□ 0.52
SPG7-213ENST00000566221 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
SPG7-213ENST00000566221 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
SPG7-213ENST00000566221 CHRNDQ07001 517 aa18.28■□□□□ 0.52
SPG7-213ENST00000566221 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
SPG7-213ENST00000566221 CENPQQ7L2Z9 268 aaPredicted RBP18.28■□□□□ 0.52
SPG7-213ENST00000566221 KIF1BPQ96EK5 621 aa18.28■□□□□ 0.52
SPG7-213ENST00000566221 ANKRD2Q9GZV1 360 aa18.28■□□□□ 0.52
SPG7-213ENST00000566221 MINPP1Q9UNW1 487 aa18.28■□□□□ 0.52
SPG7-213ENST00000566221 DUOX1Q9NRD9 1551 aa18.28■□□□□ 0.52
SPG7-213ENST00000566221 XDHP47989 1333 aa18.27■□□□□ 0.52
SPG7-213ENST00000566221 ZNF609O15014 1411 aa18.27■□□□□ 0.52
SPG7-213ENST00000566221 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
SPG7-213ENST00000566221 CC2D2BQ6DHV5 1058 aa18.27■□□□□ 0.52
SPG7-213ENST00000566221 B4GALNT3Q6L9W6 998 aa18.27■□□□□ 0.52
SPG7-213ENST00000566221 LRRCC1Q9C099 1032 aa18.27■□□□□ 0.52
SPG7-213ENST00000566221 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.52
SPG7-213ENST00000566221 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 APBB1O00213 710 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 SASH1O94885 1247 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 GRIPAP1Q4V328 841 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 VGLL2Q8N8G2 317 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 RHPN1Q8TCX5 695 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 C7orf43Q8WVR3 580 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 CCDC88AQ3V6T2 1871 aa18.26■□□□□ 0.51
SPG7-213ENST00000566221 TFCP2Q12800 502 aa18.25■□□□□ 0.51
SPG7-213ENST00000566221 CCDC93Q567U6 631 aa18.25■□□□□ 0.51
SPG7-213ENST00000566221 PODXL2Q9NZ53 605 aa18.25■□□□□ 0.51
SPG7-213ENST00000566221 ANKIB1Q9P2G1 1089 aa18.25■□□□□ 0.51
SPG7-213ENST00000566221 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
SPG7-213ENST00000566221 BCS1LQ9Y276 419 aa18.25■□□□□ 0.51
SPG7-213ENST00000566221 C21orf2O43822 256 aa18.24■□□□□ 0.51
SPG7-213ENST00000566221 PDE8BO95263 885 aa18.24■□□□□ 0.51
SPG7-213ENST00000566221 PUM3Q15397 648 aaKnown RBP18.24■□□□□ 0.51
SPG7-213ENST00000566221 SLC51AQ86UW1 340 aa18.24■□□□□ 0.51
SPG7-213ENST00000566221 HELBQ8NG08 1087 aaPredicted RBP18.24■□□□□ 0.51
SPG7-213ENST00000566221 GPR108Q9NPR9 543 aa18.24■□□□□ 0.51
SPG7-213ENST00000566221 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
SPG7-213ENST00000566221 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
SPG7-213ENST00000566221 AKAP2Q9Y2D5 859 aa18.24■□□□□ 0.51
SPG7-213ENST00000566221 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
SPG7-213ENST00000566221 GPSM2P81274 684 aa18.23■□□□□ 0.51
SPG7-213ENST00000566221 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
SPG7-213ENST00000566221 MPNDQ8N594 471 aa18.23■□□□□ 0.51
SPG7-213ENST00000566221 DICER1Q9UPY3 1922 aaKnown RBP18.23■□□□□ 0.51
SPG7-213ENST00000566221 SBF1O95248 1867 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 TAF5LO75529 589 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 HSPA6P17066 643 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 KCNJ4P48050 445 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 UBE4AQ14139 1066 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 ATP2B3Q16720 1220 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 ANKRD45Q5TZF3 282 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 DPP8Q6V1X1 898 aaPredicted RBP18.22■□□□□ 0.51
SPG7-213ENST00000566221 RTKN2Q8IZC4 609 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 CLASRPQ8N2M8 674 aaKnown RBP18.22■□□□□ 0.51
SPG7-213ENST00000566221 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 GGA1Q9UJY5 639 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
SPG7-213ENST00000566221 LEMD3Q9Y2U8 911 aa18.22■□□□□ 0.51
SPG7-213ENST00000566221 UFL1O94874 794 aa18.21■□□□□ 0.51
SPG7-213ENST00000566221 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
SPG7-213ENST00000566221 NUCB1Q02818 461 aa18.21■□□□□ 0.51
SPG7-213ENST00000566221 TNNI3KQ59H18 835 aa18.21■□□□□ 0.51
SPG7-213ENST00000566221 FPGT-TNNI3KV9GXZ4 949 aa18.21■□□□□ 0.51
SPG7-213ENST00000566221 ZNF804BA4D1E1 1349 aa18.21■□□□□ 0.51
SPG7-213ENST00000566221 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
SPG7-213ENST00000566221 GRIN3BO60391 1043 aa18.2■□□□□ 0.5
SPG7-213ENST00000566221 SLC5A1P13866 664 aa18.2■□□□□ 0.5
SPG7-213ENST00000566221 FGFR2P21802 821 aa18.2■□□□□ 0.5
SPG7-213ENST00000566221 LPIN2Q92539 896 aa18.2■□□□□ 0.5
SPG7-213ENST00000566221 GPBP1L1Q9HC44 474 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms